FFCP PHASE1:Hg19::chr3:18486296..18486319,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9779 | |EntrezGene=9779 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19166 | |HGNC=19166 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000414318_5end | |association_with_transcript=0bp_to_ENST00000414318_5end | ||
|cluster_id=chr3:18486296..18486319,- | |||
|coexpression_cluster_id=C712 | |coexpression_cluster_id=C712 | ||
|description=CAGE_peak_3_at_TBC1D5_5end | |description=CAGE_peak_3_at_TBC1D5_5end | ||
|id=chr3:18486296..18486319,- | |id=chr3:18486296..18486319,- | ||
|ontology_enrichment_celltype=CL:0000037!2.49e-42!172;CL:0000566!2.49e-42!172;CL:0000988!9.48e-40!182;CL:0002032!1.19e-37!165;CL:0000837!1.19e-37!165;CL:0000738!8.22e-34!140;CL:0002087!4.53e-29!119;CL:0002031!4.14e-28!124;CL:0000763!5.14e-19!112;CL:0000049!5.14e-19!112;CL:0000838!8.95e-19!52;CL:0000084!2.02e-18!25;CL:0000827!2.02e-18!25;CL:0000542!4.19e-18!53;CL:0000051!4.19e-18!53;CL:0000791!2.09e-15!18;CL:0000789!2.09e-15!18;CL:0002420!2.09e-15!18;CL:0002419!2.09e-15!18;CL:0000790!2.09e-15!18;CL:0000766!2.15e-13!76;CL:0000557!5.14e-12!71;CL:0000839!9.18e-11!70;CL:0002057!1.63e-10!42;CL:0000625!3.05e-10!11;CL:0002194!5.27e-10!63;CL:0000576!5.27e-10!63;CL:0000040!5.27e-10!63;CL:0000559!5.27e-10!63;CL:0002009!6.56e-10!65;CL:0000860!4.02e-09!45 | |ontology_enrichment_celltype=CL:0000037!2.49e-42!172;CL:0000566!2.49e-42!172;CL:0000988!9.48e-40!182;CL:0002032!1.19e-37!165;CL:0000837!1.19e-37!165;CL:0000738!8.22e-34!140;CL:0002087!4.53e-29!119;CL:0002031!4.14e-28!124;CL:0000763!5.14e-19!112;CL:0000049!5.14e-19!112;CL:0000838!8.95e-19!52;CL:0000084!2.02e-18!25;CL:0000827!2.02e-18!25;CL:0000542!4.19e-18!53;CL:0000051!4.19e-18!53;CL:0000791!2.09e-15!18;CL:0000789!2.09e-15!18;CL:0002420!2.09e-15!18;CL:0002419!2.09e-15!18;CL:0000790!2.09e-15!18;CL:0000766!2.15e-13!76;CL:0000557!5.14e-12!71;CL:0000839!9.18e-11!70;CL:0002057!1.63e-10!42;CL:0000625!3.05e-10!11;CL:0002194!5.27e-10!63;CL:0000576!5.27e-10!63;CL:0000040!5.27e-10!63;CL:0000559!5.27e-10!63;CL:0002009!6.56e-10!65;CL:0000860!4.02e-09!45 | ||
|ontology_enrichment_celltype_v019=CL:0000084;3.67e-29;25!CL:0000791;6.46e-24;18!CL:0000789;6.46e-24;18!CL:0002419;6.46e-24;18!CL:0000542;1.14e-16;53!CL:0000625;1.40e-15;11!CL:0002087;1.32e-10;104!CL:0000624;4.84e-09;6!CL:0000738;2.94e-08;136!CL:0000236;1.43e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.10e-42,168;CL:0000988,2.75e-38,177;CL:0002032,1.58e-35,161;CL:0000837,1.58e-35,161;CL:0000738,1.34e-32,136;CL:0002087,1.69e-30,115;CL:0000084,3.11e-29,25;CL:0000827,3.11e-29,25;CL:0000838,1.12e-27,52;CL:0000542,6.41e-27,53;CL:0000051,6.41e-27,53;CL:0002031,1.11e-25,120;CL:0000791,6.28e-24,18;CL:0000789,6.28e-24,18;CL:0002420,6.28e-24,18;CL:0002419,6.28e-24,18;CL:0000790,6.28e-24,18;CL:0000625,1.41e-15,11;CL:0000763,3.27e-12,108;CL:0000049,3.27e-12,108;CL:0000624,4.34e-09,6;CL:0000134,2.37e-07,354;CL:0000766,2.37e-07,72;CL:0000236,3.70e-07,14;CL:0002320,7.75e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;6.46e-24;18!CL:0000051;1.14e-16;53 | |||
|ontology_enrichment_disease=DOID:2531!5.29e-11!51;DOID:0060083!5.29e-11!51;DOID:1240!7.44e-11!39;DOID:8692!1.57e-09!31 | |ontology_enrichment_disease=DOID:2531!5.29e-11!51;DOID:0060083!5.29e-11!51;DOID:1240!7.44e-11!39;DOID:8692!1.57e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.58e-10;39!DOID:8692;5.73e-10;31!DOID:2531;1.89e-08;51!DOID:0060083;1.89e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.45e-13,39;DOID:2531,1.55e-12,51;DOID:0060083,1.55e-12,51;DOID:8692,2.56e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.27e-19!102;UBERON:0003061!3.27e-19!102;UBERON:0002193!3.92e-17!112;UBERON:0007023!4.74e-10!115;UBERON:0000178!5.50e-10!15;UBERON:0000179!5.50e-10!15;UBERON:0000463!5.50e-10!15;UBERON:0002371!9.18e-10!80;UBERON:0001474!1.25e-08!86;UBERON:0001950!7.47e-08!20;UBERON:0002619!1.71e-07!22;UBERON:0002405!2.77e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!3.27e-19!102;UBERON:0003061!3.27e-19!102;UBERON:0002193!3.92e-17!112;UBERON:0007023!4.74e-10!115;UBERON:0000178!5.50e-10!15;UBERON:0000179!5.50e-10!15;UBERON:0000463!5.50e-10!15;UBERON:0002371!9.18e-10!80;UBERON:0001474!1.25e-08!86;UBERON:0001950!7.47e-08!20;UBERON:0002619!1.71e-07!22;UBERON:0002405!2.77e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.25e-11;15!UBERON:0000179;5.25e-11;15!UBERON:0000463;5.25e-11;15!UBERON:0002390;3.46e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.97e-14,98;UBERON:0003061,2.97e-14,98;UBERON:0002193,1.54e-13,108;UBERON:0000178,5.26e-11,15;UBERON:0000179,5.26e-11,15;UBERON:0000463,5.26e-11,15;UBERON:0002405,1.98e-07,93;UBERON:0004177,4.89e-07,7;UBERON:0005057,4.89e-07,7;UBERON:0002370,8.81e-07,4;UBERON:0005058,8.81e-07,4;UBERON:0009113,8.81e-07,4;UBERON:0003295,8.81e-07,4;UBERON:0005562,8.81e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,3.54027849164014,1.53531759238885,2.78669021968937,0,0,0,0.0774672005803016,0,6.16560922603179,0.553995408531877,2.00544447470142,3.68918480216948,0,0.647787332037959,1.03030227053675,1.16318591023652,1.13362783106643,1.69808842831471,1.16214518452842,2.87817521615278,0.619412741790207,0,0.512321413058201,0.236482229888585,2.41321976515633,3.22742341791913,4.06279459783025,2.07066573496865,2.72906150057846,0.898893937780338,1.83650335422542,3.20929027076094,3.19668562899521,0.329851300186716,0.997318288108159,0.426224750532694,0.290209238628584,3.97169657283798,0.622822248995575,0.75374599577023,1.0429658368404,0.434377689410233,1.21079900526674,0.736555271975129,0.316462387440884,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,1.75996244461323,1.63841583378639,1.77901850772711,0.853460445133014,1.20118796110804,1.72425731986345,0,1.90810750907073,5.69212969109448,8.22132065119314,5.73409842187843,6.60856642895129,3.92355994087075,4.74091352595139,12.7861350573992,11.3973121197258,11.1024809459735,12.8733601450822,10.4295125322749,5.20792586308207,9.74133642039557,6.79603786999559,1.47302953737419,1.32920336750173,1.08321545506006,10.247305578054,5.59255194507476,21.0480517892705,15.1992509782217,14.2003512010176,30.5470320113844,30.767195230317,27.179236189294,10.4244595281761,6.89796888483458,5.15441168223945,9.86776798876061,8.28270077242652,10.4173352617027,8.55406840003537,9.48623250189969,9.7269824477358,9.99445812418767,6.15620855314444,4.10563998460523,8.66908995866349,9.62784704820626,13.9031427727487,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0.370784442784429,0,0.174129737299267,0.132957960518865,1.19245312152671,1.14398982156026,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0.397589304964456,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,3.5317047953172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,5.41929561685538,0.264145302039678,0.414656231081544,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,2.01753259188349,6.5020150866636,9.48761329381876,7.9572682493444,0,0,0,0.167516265334349,0,0.749007023947182,5.9832291840805,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.23688091430106,12.0799952458425,10.9929384537548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,1.52927441428475,6.83576624608995,7.86164859010704,3.29089818468955,1.94541993357815,2.16012574895246,7.13812658664843,0,0.962479855263359,0,0,0,16.6471913435289,5.57991954550878,14.17013537173,2.68107518185313,0.846694330895531,10.0632801485112,7.30072663094993,13.009376704892,1.72347885350326,12.5317238545034,5.41733688965131,0,6.65939033730457,10.2203097045678,0.687010689511529,13.5185936295722,12.0785098261905,11.5125907781217,3.51698571723673,0,0,0.540911356951966,13.6559506879106,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,1.6480387422676,0,1.19548792950642,1.10513566212459,0.251932747854276,0,0,0,0,0,19.951322438848,0.690503839458535,7.18449277040819,0,0.969332746095218,0.278304294485554,7.98455192004777,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0.295547618953547,0.87754158861589,0,0,0,0,0,0,0,0,0,0.533034776018635,8.17546385565892,11.4595587168368,0.166211681900156,0,0,0,0.189753732724185,0,0.210998064528027,0,0,0,0,0.530745387020035,4.888241159469,0.593042257361244,0.370691816839509,0.104421949505455,0.067401132980677,0.802577647298789,0,1.27718352450966,0,0.485560759068186,1.57833761139756,4.83962864194656,1.22429104652196,0.063186579628488,0.751617097072463,0.518440956986236,0,0,0,0,0.569219092059585,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0.696418755514666,0,0.160317640503067,0.426905989478705,0,0.432271251462318,0,0.857974989309823,0,0,0,0,0,0,0,0,0,24.2718517327247,0,3.6804229599104,0.279282401272254,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0.412618309791701,0,0.449947783103001,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,0,0,0,0,0.640724475406168,1.10043013569766,0.414239055347196,14.8849806543585,0,0.60896299190448,0,0,0,0,0,0,0,1.34228891392159,0.876336514945499,0.573409195690071,0,0.18628920882415,0.138348634936231,0,0.303298235083296,0,0,20.1384009496959,2.46365748638403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0.245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| ||
|short_description=p3@TBC1D5 | |short_description=p3@TBC1D5 | ||
}} | }} |
Latest revision as of 03:17, 17 September 2015
Short description: | p3@TBC1D5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBC1D5_5end |
Coexpression cluster: | C712_thymus_biphenotypic_CD4_non_granulocyte_merkel_acute |
Association with transcript: | 0bp_to_ENST00000414318_5end |
EntrezGene: | TBC1D5 |
HGNC: | 19166 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.10e-42 | 168 |
hematopoietic cell | 2.75e-38 | 177 |
hematopoietic oligopotent progenitor cell | 1.58e-35 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-35 | 161 |
leukocyte | 1.34e-32 | 136 |
nongranular leukocyte | 1.69e-30 | 115 |
T cell | 3.11e-29 | 25 |
pro-T cell | 3.11e-29 | 25 |
lymphoid lineage restricted progenitor cell | 1.12e-27 | 52 |
lymphocyte | 6.41e-27 | 53 |
common lymphoid progenitor | 6.41e-27 | 53 |
hematopoietic lineage restricted progenitor cell | 1.11e-25 | 120 |
mature alpha-beta T cell | 6.28e-24 | 18 |
alpha-beta T cell | 6.28e-24 | 18 |
immature T cell | 6.28e-24 | 18 |
mature T cell | 6.28e-24 | 18 |
immature alpha-beta T cell | 6.28e-24 | 18 |
CD8-positive, alpha-beta T cell | 1.41e-15 | 11 |
myeloid cell | 3.27e-12 | 108 |
common myeloid progenitor | 3.27e-12 | 108 |
CD4-positive, alpha-beta T cell | 4.34e-09 | 6 |
mesenchymal cell | 2.37e-07 | 354 |
myeloid leukocyte | 2.37e-07 | 72 |
B cell | 3.70e-07 | 14 |
connective tissue cell | 7.75e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.97e-14 | 98 |
blood island | 2.97e-14 | 98 |
hemolymphoid system | 1.54e-13 | 108 |
blood | 5.26e-11 | 15 |
haemolymphatic fluid | 5.26e-11 | 15 |
organism substance | 5.26e-11 | 15 |
immune system | 1.98e-07 | 93 |
hemopoietic organ | 4.89e-07 | 7 |
immune organ | 4.89e-07 | 7 |
thymus | 8.81e-07 | 4 |
hemolymphoid system gland | 8.81e-07 | 4 |
thymic region | 8.81e-07 | 4 |
pharyngeal gland | 8.81e-07 | 4 |
thymus primordium | 8.81e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.45e-13 | 39 |
hematologic cancer | 1.55e-12 | 51 |
immune system cancer | 1.55e-12 | 51 |
myeloid leukemia | 2.56e-10 | 31 |