FFCP PHASE1:Hg19::chr6:22146851..22146864,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:22146851..22146864,+ to FFCP PHASE1:Hg19::chr6:22146851..22146864,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=401237 | |EntrezGene=401237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=28245 | |HGNC=28245 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-18bp_to_uc003ndn.2_5end | |||
|cluster_id=chr6:22146851..22146864,+ | |||
|description=CAGE_peak_6_at_LINC00340_5end | |||
|id=chr6:22146851..22146864,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!2.19e-36!34;UBERON:0002791!6.50e-35!33;UBERON:0001869!2.03e-34!32;UBERON:0002020!1.01e-33!34;UBERON:0003528!1.01e-33!34;UBERON:0001017!1.38e-33!82;UBERON:0001049!2.95e-33!57;UBERON:0005068!2.95e-33!57;UBERON:0006241!2.95e-33!57;UBERON:0007135!2.95e-33!57;UBERON:0002780!5.75e-33!41;UBERON:0001890!5.75e-33!41;UBERON:0006240!5.75e-33!41;UBERON:0005743!1.10e-32!86;UBERON:0000073!1.84e-32!94;UBERON:0001016!1.84e-32!94;UBERON:0003080!6.14e-32!42;UBERON:0002619!4.25e-29!22;UBERON:0000955!2.88e-26!69;UBERON:0006238!2.88e-26!69;UBERON:0001950!4.05e-26!20;UBERON:0002616!4.18e-26!59;UBERON:0000956!6.89e-25!25;UBERON:0000203!6.89e-25!25;UBERON:0007023!1.96e-23!115;UBERON:0003075!2.45e-21!86;UBERON:0007284!2.45e-21!86;UBERON:0002346!6.26e-21!90;UBERON:0003056!4.55e-20!61;UBERON:0000153!1.20e-17!129;UBERON:0007811!1.20e-17!129;UBERON:0000033!5.33e-16!123;UBERON:0004121!8.97e-16!169;UBERON:0000924!9.17e-16!173;UBERON:0006601!9.17e-16!173;UBERON:0000200!9.07e-11!6;UBERON:0002420!1.30e-10!9;UBERON:0007245!1.30e-10!9;UBERON:0010009!1.30e-10!9;UBERON:0010011!1.30e-10!9;UBERON:0000454!1.30e-10!9;UBERON:0009663!1.43e-10!7;UBERON:0002308!3.33e-10!9;UBERON:0000125!3.33e-10!9;UBERON:0001872!1.04e-08!5;UBERON:0002021!1.20e-08!5;UBERON:0001871!8.24e-08!7;UBERON:0000369!2.91e-07!4;UBERON:0002435!2.91e-07!4;UBERON:0000204!2.91e-07!4;UBERON:0010082!2.91e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.41e-41;22!UBERON:0001869;1.05e-37;32!UBERON:0000956;3.16e-36;25!UBERON:0000203;3.16e-36;25!UBERON:0001950;1.91e-33;20!UBERON:0002791;6.67e-33;32!UBERON:0001893;7.67e-32;34!UBERON:0003528;1.82e-31;34!UBERON:0002020;1.82e-31;34!UBERON:0002780;7.66e-26;41!UBERON:0001890;7.66e-26;41!UBERON:0000200;2.58e-21;6!UBERON:0000073;3.44e-18;53!UBERON:0002616;3.44e-18;53!UBERON:0000349;9.92e-17;5!UBERON:0001017;3.20e-14;75!UBERON:0001016;1.26e-12;83!UBERON:0000955;2.13e-12;68!UBERON:0001871;2.98e-12;6!UBERON:0002370;3.42e-12;2!UBERON:0005058;3.42e-12;2!UBERON:0009113;3.42e-12;2!UBERON:0002771;3.82e-11;2!UBERON:0001954;3.82e-11;2!UBERON:0003022;3.82e-11;2!UBERON:0002421;3.82e-11;2!UBERON:0002600;3.82e-11;2!UBERON:0001872;5.50e-10;5!UBERON:0001870;5.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.69e-41,22;UBERON:0001869,2.10e-41,32;UBERON:0001893,8.01e-39,34;UBERON:0002791,1.34e-36,32;UBERON:0000956,2.31e-36,25;UBERON:0000203,2.31e-36,25;UBERON:0003528,2.63e-34,34;UBERON:0002020,2.63e-34,34;UBERON:0001950,1.18e-33,20;UBERON:0002780,1.01e-31,41;UBERON:0001890,1.01e-31,41;UBERON:0003080,1.01e-31,41;UBERON:0006240,1.01e-31,41;UBERON:0001049,2.45e-28,56;UBERON:0005068,2.45e-28,56;UBERON:0006241,2.45e-28,56;UBERON:0007135,2.45e-28,56;UBERON:0001017,9.12e-28,81;UBERON:0001016,6.26e-27,89;UBERON:0000073,7.57e-27,53;UBERON:0002616,7.57e-27,53;UBERON:0000955,2.18e-22,68;UBERON:0006238,2.18e-22,68;UBERON:0000200,1.15e-21,6;UBERON:0003056,2.87e-20,61;UBERON:0003075,3.95e-18,82;UBERON:0007284,3.95e-18,82;UBERON:0002346,4.20e-17,86;UBERON:0000349,1.67e-16,5;UBERON:0010371,1.87e-13,104;UBERON:0001871,1.57e-12,6;UBERON:0011216,5.87e-12,223;UBERON:0007023,6.22e-12,114;UBERON:0004121,9.32e-12,171;UBERON:0000924,9.32e-12,171;UBERON:0006601,9.32e-12,171;UBERON:0002771,1.28e-11,2;UBERON:0010314,4.76e-11,132;UBERON:0001954,4.97e-11,2;UBERON:0003022,4.97e-11,2;UBERON:0002421,4.97e-11,2;UBERON:0002600,4.97e-11,2;UBERON:0001872,7.40e-10,5;UBERON:0001870,6.00e-08,3 | |||
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| ||
|short_description=p6@LINC00340 | |||
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Latest revision as of 04:32, 17 September 2015
Short description: | p6@LINC00340 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LINC00340_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_uc003ndn.2_5end |
EntrezGene: | LINC00340 |
HGNC: | 28245 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data