FFCP PHASE1:Hg19::chr13:37494248..37494260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4093 | |EntrezGene=4093 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6774 | |HGNC=6774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=114bp_to_ENST00000350148_5end | |association_with_transcript=114bp_to_ENST00000350148_5end | ||
|cluster_id=chr13:37494248..37494260,- | |||
|coexpression_cluster_id=C3369 | |coexpression_cluster_id=C3369 | ||
|description=CAGE_peak_3_at_SMAD9_5end | |description=CAGE_peak_3_at_SMAD9_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.27e-10;82 | |ontology_enrichment_development_v019=UBERON:0006601;2.27e-10;82 | ||
|ontology_enrichment_disease=DOID:171!9.67e-07!10 | |ontology_enrichment_disease=DOID:171!9.67e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:171;8.43e-10;10 | |ontology_enrichment_disease_v019=DOID:171;8.43e-10;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,5.29e-10,10 | |||
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| ||
|short_description=p3@SMAD9 | |short_description=p3@SMAD9 | ||
}} | }} |
Latest revision as of 06:18, 17 September 2015
Short description: | p3@SMAD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMAD9_5end |
Coexpression cluster: | C3369_peripheral_thyroid_medulloblastoma_argyrophil_neuroblastoma_Adipocyte_neuroectodermal |
Association with transcript: | 114bp_to_ENST00000350148_5end |
EntrezGene: | SMAD9 |
HGNC: | 6774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.29e-10 | 10 |