FFCP PHASE1:Hg19::chr10:135379074..135379092,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93426 | |EntrezGene=93426 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28852 | |HGNC=28852 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460441,ENST00000482127_5end | |association_with_transcript=0bp_to_ENST00000460441,ENST00000482127_5end | ||
|cluster_id=chr10:135379074..135379092,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_SYCE1_5end | |description=CAGE_peak_2_at_SYCE1_5end | ||
|id=chr10:135379074..135379092,- | |id=chr10:135379074..135379092,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002573;2.48e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.11e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.13e-32!115;UBERON:0001049!5.24e-19!57;UBERON:0005068!5.24e-19!57;UBERON:0006241!5.24e-19!57;UBERON:0007135!5.24e-19!57;UBERON:0001893!1.29e-17!34;UBERON:0001869!1.64e-17!32;UBERON:0002619!3.68e-17!22;UBERON:0001950!3.85e-17!20;UBERON:0002791!1.76e-16!33;UBERON:0000073!4.45e-16!94;UBERON:0001016!4.45e-16!94;UBERON:0002020!4.54e-16!34;UBERON:0003528!4.54e-16!34;UBERON:0001017!6.60e-16!82;UBERON:0002616!1.12e-15!59;UBERON:0005743!1.89e-15!86;UBERON:0000955!3.51e-15!69;UBERON:0006238!3.51e-15!69;UBERON:0002780!7.85e-15!41;UBERON:0001890!7.85e-15!41;UBERON:0006240!7.85e-15!41;UBERON:0000956!1.69e-14!25;UBERON:0000203!1.69e-14!25;UBERON:0003075!2.28e-14!86;UBERON:0007284!2.28e-14!86;UBERON:0003080!2.65e-14!42;UBERON:0002346!3.23e-13!90;UBERON:0004121!2.61e-10!169;UBERON:0000924!9.68e-10!173;UBERON:0006601!9.68e-10!173;UBERON:0000200!1.24e-09!6;UBERON:0000153!2.60e-09!129;UBERON:0007811!2.60e-09!129;UBERON:0000033!1.33e-08!123;UBERON:0003056!2.31e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.11e-19;20!UBERON:0002619;1.50e-17;22!UBERON:0001869;4.49e-16;32!UBERON:0001893;1.34e-15;34!UBERON:0000956;2.63e-15;25!UBERON:0000203;2.63e-15;25!UBERON:0003528;2.15e-14;34!UBERON:0002020;2.15e-14;34!UBERON:0002791;2.44e-13;32!UBERON:0000200;2.44e-12;6!UBERON:0000955;6.34e-10;68!UBERON:0001017;7.61e-10;75!UBERON:0002780;3.52e-09;41!UBERON:0001890;3.52e-09;41!UBERON:0000073;6.98e-09;53!UBERON:0002616;6.98e-09;53!UBERON:0002021;1.39e-08;5!UBERON:0001872;1.59e-08;5!UBERON:0004732;3.08e-08;13!UBERON:0001016;5.47e-08;83!UBERON:0002298;3.56e-07;6!UBERON:0001870;4.30e-07;3!UBERON:0000988;6.84e-07;3!UBERON:0007023;8.21e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.95e-20,89;UBERON:0001950,1.51e-19,20;UBERON:0000955,2.12e-18,68;UBERON:0006238,2.12e-18,68;UBERON:0002619,1.11e-17,22;UBERON:0000073,2.28e-17,53;UBERON:0002616,2.28e-17,53;UBERON:0001869,5.59e-17,32;UBERON:0001017,1.06e-16,81;UBERON:0001049,2.90e-16,56;UBERON:0005068,2.90e-16,56;UBERON:0006241,2.90e-16,56;UBERON:0007135,2.90e-16,56;UBERON:0001893,7.25e-16,34;UBERON:0003528,7.57e-16,34;UBERON:0002020,7.57e-16,34;UBERON:0000956,2.02e-15,25;UBERON:0000203,2.02e-15,25;UBERON:0007023,2.23e-15,114;UBERON:0002791,3.48e-14,32;UBERON:0002780,8.30e-13,41;UBERON:0001890,8.30e-13,41;UBERON:0003080,8.30e-13,41;UBERON:0006240,8.30e-13,41;UBERON:0000200,1.69e-12,6;UBERON:0003075,1.57e-11,82;UBERON:0007284,1.57e-11,82;UBERON:0010371,6.79e-11,104;UBERON:0002346,7.89e-11,86;UBERON:0004121,2.73e-10,171;UBERON:0000924,2.73e-10,171;UBERON:0006601,2.73e-10,171;UBERON:0003056,2.26e-09,61;UBERON:0011216,4.67e-09,223;UBERON:0010314,1.05e-08,132;UBERON:0002021,1.24e-08,5;UBERON:0001872,1.34e-08,5;UBERON:0004732,3.01e-08,13;UBERON:0002298,3.53e-07,6;UBERON:0001870,3.93e-07,3;UBERON:0000988,5.99e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.986680828671798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1104262862187,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5608003841516,0,0,0,0,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743155811443641,0,0.503946384596579,0,0,0.290633938513962,1.91691339582606,0,0,1.03664057770386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.533637789017222,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.154209693802656,0.710246901252508,0.410635780069046,1.03850885836724,0.581051892299796,0,0,1.10497186723076,0,0,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6575188799237,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.20598527610407,1.99613798001194,0,0,0,0,4.57656570526979,0,0,0,0,0,0.120596438625408,0,0.110579259931225,1.18219047581419,2.63262476584767,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,13.6682954331232,0.17472666824203,0,0,0,0,0,0,0,4.93350928728303,0,2.21587785845575,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.607495566580247,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,1.55139547633861,0,0,0,0,0,0,0,0,0,0,0,1.0027595760908,0.306345576763462,0.655745261419609,0,2.65820453990096,2.80660409274515,0.876336514945499,1.14681839138014,0.332787154610557,0.807253238237985,0,0,0,11.1331480082537,0,0,0,0.895528817321244,0,1.10961172300523,0,0.251567901752575,0,0.228840068396924,0,0.466311601748341,1.33069634990671,0,0,0.310525913752519,0,0,0,0,0,0,2.00033525122815,0,0,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0.194860308839388,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,1.41696576325585,0.478901577171454,3.07674546361133,0,1.38314504928436,2.09918339321406,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.82351478469666,1.56215619722769,0.206686796501184,1.33173201407204,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,2.10706172228178,2.10472875401117,0,0,0.235479278551542,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,7.33658404529505,7.66920642832419,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,12.962289894755,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,8.04634967185241,1.22384682343646,0,0,0,0.462175628631418,0,0,0,0,0.305966489225945,0,0,3.76061308938563,20.0055763296152,56.8083955931098,0.829169439458779,0,0,0.23806443146374,0.0645889098360061,0.186224142887574,0,0.318235791390825,0.404234377916439,0.217716747896961,0,0.202056159043763,0.286888821570705,0,0,0,0,0,0,0.488965776731466,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0.986680828671798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1104262862187,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5608003841516,0,0,0,0,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743155811443641,0,0.503946384596579,0,0,0.290633938513962,1.91691339582606,0,0,1.03664057770386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.533637789017222,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.154209693802656,0.710246901252508,0.410635780069046,1.03850885836724,0.581051892299796,0,0,1.10497186723076,0,0,0.131124414959424,0,0.308061348417659,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0.384380134730212,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6575188799237,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,1.20598527610407,1.99613798001194,0,0,0,0,4.57656570526979,0,0,0,0,0,0.120596438625408,0,0.110579259931225,1.18219047581419,2.63262476584767,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,13.6682954331232,0.17472666824203,0,0,0,0,0,0,0,4.93350928728303,0,2.21587785845575,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,0.229160424011684,0.717873024576814,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.607495566580247,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,1.55139547633861,0,0,0,0,0,0,0,0,0,0,0,1.0027595760908,0.306345576763462,0.655745261419609,0,2.65820453990096,2.80660409274515,0.876336514945499,1.14681839138014,0.332787154610557,0.807253238237985,0,0,0,11.1331480082537,0,0,0,0.895528817321244,0,1.10961172300523,0,0.251567901752575,0,0.228840068396924,0,0.466311601748341,1.33069634990671,0,0,0.310525913752519,0,0,0,0,0,0,2.00033525122815,0,0,0.398095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0.194860308839388,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09189682663981,1.41696576325585,0.478901577171454,3.07674546361133,0,1.38314504928436,2.09918339321406,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,1.82351478469666,1.56215619722769,0.206686796501184,1.33173201407204,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,2.10706172228178,2.10472875401117,0,0,0.235479278551542,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,7.33658404529505,7.66920642832419,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,12.962289894755,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0.339854229375634,0.0939839179798536,0,0,0,0,0,0,0,0,8.04634967185241,1.22384682343646,0,0,0,0.462175628631418,0,0,0,0,0.305966489225945,0,0,3.76061308938563,20.0055763296152,56.8083955931098,0.829169439458779,0,0,0.23806443146374,0.0645889098360061,0.186224142887574,0,0.318235791390825,0.404234377916439,0.217716747896961,0,0.202056159043763,0.286888821570705,0,0,0,0,0,0,0.488965776731466,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p2@SYCE1 | |short_description=p2@SYCE1 | ||
}} | }} |
Latest revision as of 06:24, 17 September 2015
Short description: | p2@SYCE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYCE1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000460441, ENST00000482127_5end |
EntrezGene: | SYCE1 |
HGNC: | 28852 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.48e-07 | 2 |