FFCP PHASE1:Hg19::chr1:27961629..27961665,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2268 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3697 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000475472_5end | |||
|cluster_id=chr1:27961629..27961665,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_FGR_5end | |||
|id=chr1:27961629..27961665,- | |||
|ontology_enrichment_celltype=CL:0000738!4.48e-50!140;CL:0000766!3.69e-48!76;CL:0000037!9.80e-45!172;CL:0000566!9.80e-45!172;CL:0000557!4.32e-43!71;CL:0002031!5.69e-43!124;CL:0002032!7.05e-42!165;CL:0000837!7.05e-42!165;CL:0000839!3.29e-41!70;CL:0000988!9.81e-41!182;CL:0002087!8.99e-40!119;CL:0002009!2.01e-39!65;CL:0002194!4.11e-38!63;CL:0000576!4.11e-38!63;CL:0000040!4.11e-38!63;CL:0000559!4.11e-38!63;CL:0000763!6.86e-38!112;CL:0000049!6.86e-38!112;CL:0002057!7.47e-36!42;CL:0000860!6.25e-32!45;CL:0002393!8.24e-09!9;CL:0002397!8.24e-09!9;CL:0000094!4.26e-08!8;CL:0000134!8.14e-08!358;CL:0002320!3.52e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-30;33!CL:0002057;2.63e-30;33!CL:0000473;2.33e-29;39!CL:0000234;2.33e-29;39!CL:0000576;4.80e-28;48!CL:0000766;2.20e-25;69!CL:0000738;1.16e-13;136!CL:0002087;3.58e-13;104!CL:0000763;3.77e-12;100!CL:0000094;2.72e-09;8!CL:0000988;1.18e-07;177!CL:0002393;1.91e-07;6!CL:0002397;1.91e-07;6!CL:0000236;3.85e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.84e-61,72;CL:0000738,6.44e-59,136;CL:0000557,3.97e-55,67;CL:0000839,1.01e-51,66;CL:0002009,8.37e-51,61;CL:0002031,2.99e-49,120;CL:0002194,3.00e-49,59;CL:0000576,3.00e-49,59;CL:0000040,3.00e-49,59;CL:0000559,3.00e-49,59;CL:0000473,5.40e-47,48;CL:0000234,5.40e-47,48;CL:0000037,1.43e-46,168;CL:0002087,2.21e-46,115;CL:0002032,5.65e-44,161;CL:0000837,5.65e-44,161;CL:0000860,4.03e-42,42;CL:0002057,4.03e-42,42;CL:0000988,4.90e-42,177;CL:0000763,7.68e-42,108;CL:0000049,7.68e-42,108;CL:0002393,3.97e-10,9;CL:0002397,3.97e-10,9;CL:0000094,2.75e-09,8;CL:0000134,3.49e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.90e-30;42!CL:0000049;1.67e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.45e-42!102;UBERON:0003061!2.45e-42!102;UBERON:0007023!9.13e-42!115;UBERON:0002193!3.69e-39!112;UBERON:0002371!1.94e-36!80;UBERON:0001474!1.13e-31!86;UBERON:0002405!2.18e-26!115;UBERON:0004765!4.94e-26!101;UBERON:0001434!4.94e-26!101;UBERON:0003081!4.64e-14!216;UBERON:0001049!3.32e-12!57;UBERON:0005068!3.32e-12!57;UBERON:0006241!3.32e-12!57;UBERON:0007135!3.32e-12!57;UBERON:0000479!3.03e-10!787;UBERON:0002204!2.04e-09!167;UBERON:0003080!3.36e-09!42;UBERON:0002616!5.48e-09!59;UBERON:0002780!8.68e-09!41;UBERON:0001890!8.68e-09!41;UBERON:0006240!8.68e-09!41;UBERON:0002020!2.15e-07!34;UBERON:0003528!2.15e-07!34;UBERON:0001893!4.06e-07!34;UBERON:0000178!4.95e-07!15;UBERON:0000179!4.95e-07!15;UBERON:0000463!4.95e-07!15;UBERON:0003075!5.25e-07!86;UBERON:0007284!5.25e-07!86;UBERON:0002791!6.51e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.63e-10;114!UBERON:0000178;2.15e-08;15!UBERON:0000179;2.15e-08;15!UBERON:0000463;2.15e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.57e-53,98;UBERON:0003061,8.57e-53,98;UBERON:0002193,1.24e-47,108;UBERON:0002371,2.97e-45,76;UBERON:0007023,4.16e-41,114;UBERON:0001474,6.50e-40,82;UBERON:0002405,1.27e-39,93;UBERON:0004765,5.93e-34,90;UBERON:0001434,7.19e-29,100;UBERON:0003081,1.38e-20,203;UBERON:0002204,4.89e-11,167;UBERON:0000479,1.23e-10,773;UBERON:0001049,1.47e-09,56;UBERON:0005068,1.47e-09,56;UBERON:0006241,1.47e-09,56;UBERON:0007135,1.47e-09,56;UBERON:0000926,1.47e-08,315;UBERON:0004120,1.47e-08,315;UBERON:0006603,1.47e-08,315;UBERON:0000178,2.17e-08,15;UBERON:0000179,2.17e-08,15;UBERON:0000463,2.17e-08,15;UBERON:0000073,2.32e-08,53;UBERON:0002616,2.32e-08,53;UBERON:0003528,4.06e-07,34;UBERON:0002020,4.06e-07,34;UBERON:0002780,4.16e-07,41;UBERON:0001890,4.16e-07,41;UBERON:0003080,4.16e-07,41;UBERON:0006240,4.16e-07,41;UBERON:0001893,7.96e-07,34 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,1.34465029290355,0,0,0,0,0.408001382488506,0,0,0,0,3.2857764471619,2.21671591514854,2.2826126580967,145.151418157246,72.159926842276,141.966385080842,0,0,0,0,0.284338464974843,0.587200878669695,373.392905350485,432.774917640566,310.542555994384,26.1981104860711,42.4300702484863,40.1817885509331,280.182406128221,292.09810447145,284.551103773308,345.389548841847,312.898762784609,326.430514923439,303.515473899869,301.757312291281,269.826224302876,278.554510035188,267.230659003704,316.89797863076,322.270885296939,313.296260266407,262.926476800749,323.224590343673,298.463995180767,285.144358106372,288.29003636319,298.796559117205,324.783259905913,377.562219455788,347.807142735669,361.859726666429,275.619785786647,270.128151741664,255.631270217922,333.575125950986,319.664988037206,316.778849828325,284.138360089562,334.001355245083,224.125092048454,271.722958743372,267.16469236504,199.299727504379,246.821036079921,310.906766462178,252.076532195195,12.3197371122926,22.9378216730095,14.2321480618169,19.6295902380593,10.4102956629363,21.8405927182704,27.1028397841793,21.9432363543134,10.2458334439701,11.1575065980478,7.64546456250458,0,42.0381422236152,2.63384084775077,0.983548850569165,1.96505381374582,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0,0.253019692019503,5.09704662918555,1.95325036156926,0,15.8103875031661,7.93516989157394,14.9916871862815,17.2847393992132,4.10563998460523,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0.486634870302636,0,0,0.87834785693126,4.84622579341537,0,0,51.9275829847493,59.2041106817509,85.757884534668,11.6860405909618,6.29194401858141,5.94332002127304,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0,0.450445921933289,0,0,0,636.499416216186,825.971962635933,0,0,0,0,0,2.4826786753885,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0,0,0,6.25798129319264,3.21620469096443,2.76269842704961,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,2.94848165003288,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5460407304877,126.128298910049,72.5320071968994,0,0,0,0,0,0,54.6856194064497,5.63509977684647,9.53709331487551,18.591473990788,7.95327330586194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,41.3520854180048,20.5925407487172,59.0335030552489,0,0,0,0,0,0,0,16.35355309676,3.45004119775228,16.1712225712483,0,1.30139853857622,0,0,0,543.030092361707,385.918282373192,435.965120134709,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.347534457872331,0,0,102.350172930829,154.882796187767,102.2450003757,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0.211103257785751,0,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0.219259876645935,1.0457418040996,0,0,0,10.7162652113631,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.681813019328807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,1.34060455107157,0,9.69681148000825,0,0,0,0,201.964148474403,253.094915564126,181.717452708558,113.398325117908,167.424445146081,228.911078851029,220.872857830389,212.557547246864,0,0,0,0,0,1.77854608371035,0,0,3.63860203251497,0.211673582723883,0,0.280797178113459,0,0.94007937463814,0,0.169291777801603,0,0.201799707191048,2.12923118845163,0,0.614481528616916,3.13146551049382,1.83534055883099,0.976940477010201,0,0,0.270455678475983,1.6653598399891,0,0,16.4089160784521,0,0,0,0.23874448473769,4.75143489332222,0,1.9882952955326,2.11004124615769,0,0,0,4.18420775327246,2.48655523978033,0,0,0.738508832766417,0,0,0,4.60415133204185,2.66337195219721,81.4242513979595,0,0,1.66982576691332,0,0,0,5.79999660347835,0,0,0,0,0,0,1.77148277162768,2.41192877250816,1.52581736317083,1.21637185924347,0.591095237907095,2.19385397153973,0,0,3.46276163267087,0,0,0,0,1.5950057986596,0.183195186803725,3.19820865611181,0,0,1.66211681900156,0,0,0,0,0.158936578980379,0,0,0,0,2.98578579323551,2.38835424159016,1.22206028986725,0,0,0,2.02203398942031,0,1.63985112007737,0,0,0,5.52418163989147,2.41981432097328,0.61214552326098,18.260921512633,0,0,0,0,0,0,0,0,0,0,0,3.31980669659857,0,0,0,0,1.93978032976839,0,1.12990370390266,0,0,1.58276989889697,0.391102765469606,0,3.84215390530835,0.39961921916426,0,0,0,0,0,0,0,0,0,0,3.00210144354895,3.9702559878678,8.94226116468806,0,0,10.8920136496179,3.66656678418694,7.89660327034495,3.19486400798386,3.43380838509257,7.14148663813992,1.94832070211506,0,0,0,0,0,0,0,2.38568906942791,2.31545790389679,0.160753148465019,0,0,14.6233029508475,27.8568703640862,1.88323625639876,0,2.20655980437755,2.15063811353492,0,0,0,3.57347663186684,7.28301167401975,0,0,0,0,0,0,0,0,1.90517903781507,2.65013777824443,3.619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| |||
|short_description=p1@FGR | |||
}} |
Latest revision as of 08:41, 17 September 2015
Short description: | p1@FGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGR_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000475472_5end |
EntrezGene: | FGR |
HGNC: | 3697 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.84e-61 | 72 |
leukocyte | 6.44e-59 | 136 |
granulocyte monocyte progenitor cell | 3.97e-55 | 67 |
myeloid lineage restricted progenitor cell | 1.01e-51 | 66 |
macrophage dendritic cell progenitor | 8.37e-51 | 61 |
hematopoietic lineage restricted progenitor cell | 2.99e-49 | 120 |
monopoietic cell | 3.00e-49 | 59 |
monocyte | 3.00e-49 | 59 |
monoblast | 3.00e-49 | 59 |
promonocyte | 3.00e-49 | 59 |
defensive cell | 5.40e-47 | 48 |
phagocyte | 5.40e-47 | 48 |
hematopoietic stem cell | 1.43e-46 | 168 |
nongranular leukocyte | 2.21e-46 | 115 |
hematopoietic oligopotent progenitor cell | 5.65e-44 | 161 |
hematopoietic multipotent progenitor cell | 5.65e-44 | 161 |
classical monocyte | 4.03e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.03e-42 | 42 |
hematopoietic cell | 4.90e-42 | 177 |
myeloid cell | 7.68e-42 | 108 |
common myeloid progenitor | 7.68e-42 | 108 |
intermediate monocyte | 3.97e-10 | 9 |
CD14-positive, CD16-positive monocyte | 3.97e-10 | 9 |
granulocyte | 2.75e-09 | 8 |
mesenchymal cell | 3.49e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.57e-53 | 98 |
blood island | 8.57e-53 | 98 |
hemolymphoid system | 1.24e-47 | 108 |
bone marrow | 2.97e-45 | 76 |
adult organism | 4.16e-41 | 114 |
bone element | 6.50e-40 | 82 |
immune system | 1.27e-39 | 93 |
skeletal element | 5.93e-34 | 90 |
skeletal system | 7.19e-29 | 100 |
lateral plate mesoderm | 1.38e-20 | 203 |
musculoskeletal system | 4.89e-11 | 167 |
tissue | 1.23e-10 | 773 |
neural tube | 1.47e-09 | 56 |
neural rod | 1.47e-09 | 56 |
future spinal cord | 1.47e-09 | 56 |
neural keel | 1.47e-09 | 56 |
mesoderm | 1.47e-08 | 315 |
mesoderm-derived structure | 1.47e-08 | 315 |
presumptive mesoderm | 1.47e-08 | 315 |
blood | 2.17e-08 | 15 |
haemolymphatic fluid | 2.17e-08 | 15 |
organism substance | 2.17e-08 | 15 |
regional part of nervous system | 2.32e-08 | 53 |
regional part of brain | 2.32e-08 | 53 |
brain grey matter | 4.06e-07 | 34 |
gray matter | 4.06e-07 | 34 |
regional part of forebrain | 4.16e-07 | 41 |
forebrain | 4.16e-07 | 41 |
anterior neural tube | 4.16e-07 | 41 |
future forebrain | 4.16e-07 | 41 |
telencephalon | 7.96e-07 | 34 |