FFCP PHASE1:Hg19::chr8:21646290..21646308,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2675 | |EntrezGene=2675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4244 | |HGNC=4244 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJ44 | |UniProt=E5RJ44 | ||
|association_with_transcript=0bp_to_ENST00000519195_5end | |association_with_transcript=0bp_to_ENST00000519195_5end | ||
|cluster_id=chr8:21646290..21646308,- | |||
|coexpression_cluster_id=C1759 | |||
|description=CAGE_peak_4_at_GFRA2_5end | |description=CAGE_peak_4_at_GFRA2_5end | ||
|id=chr8:21646290..21646308,- | |id=chr8:21646290..21646308,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;1.71e-08;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.04e-09;82!UBERON:0007297;3.66e-09;2 | |||
|ontology_enrichment_disease=DOID:171!2.34e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.01e-20;10!DOID:3095;1.04e-08;22!DOID:2994;1.04e-08;22!DOID:169;3.89e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.57e-20,10;DOID:3095,9.36e-09,22;DOID:2994,9.36e-09,22;DOID:169,4.23e-07,6 | |||
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|short_description=p4@GFRA2 | |short_description=p4@GFRA2 | ||
}} | }} |
Latest revision as of 09:12, 17 September 2015
Short description: | p4@GFRA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GFRA2_5end |
Coexpression cluster: | C1759_neuroectodermal_neuroblastoma_peripheral_occipital_postcentral_paracentral_parietal |
Association with transcript: | 0bp_to_ENST00000519195_5end |
EntrezGene: | GFRA2 |
HGNC: | 4244 |
UniProt: | E5RJ44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.57e-20 | 10 |
germ cell and embryonal cancer | 9.36e-09 | 22 |
germ cell cancer | 9.36e-09 | 22 |
neuroendocrine tumor | 4.23e-07 | 6 |