FFCP PHASE1:Hg19::chr12:132195617..132195648,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6433 | |EntrezGene=6433 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10790 | |HGNC=10790 | ||
|TSSclassifier=strong | |||
|UniProt=Q12872,F5H5X1,F5H1A5,F5H525,Q59H38 | |UniProt=Q12872,F5H5X1,F5H1A5,F5H525,Q59H38 | ||
|association_with_transcript=0bp_to_ENST00000261674,ENST00000535236,ENST00000535399,ENST00000538548,ENST00000540469,ENST00000544623,NM_004592,uc001uiz.1,uc001uja.1,uc001ujb.1,uc010tbn.1_5end | |association_with_transcript=0bp_to_ENST00000261674,ENST00000535236,ENST00000535399,ENST00000538548,ENST00000540469,ENST00000544623,NM_004592,uc001uiz.1,uc001uja.1,uc001ujb.1,uc010tbn.1_5end | ||
|cluster_id=chr12:132195617..132195648,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_SFSWAP_5end | |description=CAGE_peak_1_at_SFSWAP_5end | ||
|id=chr12:132195617..132195648,+ | |id=chr12:132195617..132195648,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.94e-28!172;CL:0000566!1.94e-28!172;CL:0000988!5.68e-27!182;CL:0002032!6.43e-26!165;CL:0000837!6.43e-26!165;CL:0000738!1.25e-24!140;CL:0002031!1.32e-18!124;CL:0000763!3.41e-17!112;CL:0000049!3.41e-17!112;CL:0002087!1.16e-16!119;CL:0002057!9.27e-16!42;CL:0000860!1.76e-14!45;CL:0000766!1.67e-12!76;CL:0000557!1.90e-10!71;CL:0000839!8.74e-10!70;CL:0002009!1.52e-08!65;CL:0000838!1.78e-08!52;CL:0000542!2.23e-08!53;CL:0000051!2.23e-08!53;CL:0000791!8.61e-08!18;CL:0000789!8.61e-08!18;CL:0002420!8.61e-08!18;CL:0002419!8.61e-08!18;CL:0000790!8.61e-08!18;CL:0002194!9.98e-08!63;CL:0000576!9.98e-08!63;CL:0000040!9.98e-08!63;CL:0000559!9.98e-08!63 | |ontology_enrichment_celltype=CL:0000037!1.94e-28!172;CL:0000566!1.94e-28!172;CL:0000988!5.68e-27!182;CL:0002032!6.43e-26!165;CL:0000837!6.43e-26!165;CL:0000738!1.25e-24!140;CL:0002031!1.32e-18!124;CL:0000763!3.41e-17!112;CL:0000049!3.41e-17!112;CL:0002087!1.16e-16!119;CL:0002057!9.27e-16!42;CL:0000860!1.76e-14!45;CL:0000766!1.67e-12!76;CL:0000557!1.90e-10!71;CL:0000839!8.74e-10!70;CL:0002009!1.52e-08!65;CL:0000838!1.78e-08!52;CL:0000542!2.23e-08!53;CL:0000051!2.23e-08!53;CL:0000791!8.61e-08!18;CL:0000789!8.61e-08!18;CL:0002420!8.61e-08!18;CL:0002419!8.61e-08!18;CL:0000790!8.61e-08!18;CL:0002194!9.98e-08!63;CL:0000576!9.98e-08!63;CL:0000040!9.98e-08!63;CL:0000559!9.98e-08!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-11;33!CL:0002057;1.60e-11;33!CL:0000576;2.90e-09;48!CL:0000766;7.03e-08;69!CL:0000791;7.50e-08;18!CL:0000789;7.50e-08;18!CL:0002419;7.50e-08;18!CL:0002087;1.41e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.32e-30,168;CL:0000988,1.90e-28,177;CL:0002032,3.43e-27,161;CL:0000837,3.43e-27,161;CL:0000738,5.09e-26,136;CL:0002031,7.62e-20,120;CL:0000763,1.88e-18,108;CL:0000049,1.88e-18,108;CL:0002087,7.77e-18,115;CL:0000860,9.27e-16,42;CL:0002057,9.27e-16,42;CL:0000766,7.96e-14,72;CL:0000557,1.18e-11,67;CL:0000839,6.07e-11,66;CL:0000473,9.33e-11,48;CL:0000234,9.33e-11,48;CL:0002009,1.21e-09,61;CL:0002194,9.20e-09,59;CL:0000576,9.20e-09,59;CL:0000040,9.20e-09,59;CL:0000559,9.20e-09,59;CL:0000838,1.78e-08,52;CL:0000542,2.23e-08,53;CL:0000051,2.23e-08,53;CL:0000791,8.61e-08,18;CL:0000789,8.61e-08,18;CL:0002420,8.61e-08,18;CL:0002419,8.61e-08,18;CL:0000790,8.61e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-11;42!CL:0000790;7.50e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.53e-13!102;UBERON:0003061!3.53e-13!102;UBERON:0007023!2.47e-12!115;UBERON:0002193!5.55e-12!112;UBERON:0001049!1.01e-08!57;UBERON:0005068!1.01e-08!57;UBERON:0006241!1.01e-08!57;UBERON:0007135!1.01e-08!57;UBERON:0002371!2.12e-08!80;UBERON:0001474!2.36e-08!86;UBERON:0002780!3.16e-07!41;UBERON:0001890!3.16e-07!41;UBERON:0006240!3.16e-07!41;UBERON:0002405!7.76e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.78e-14,98;UBERON:0003061,2.78e-14,98;UBERON:0002193,6.10e-13,108;UBERON:0007023,4.21e-12,114;UBERON:0001049,1.97e-09,56;UBERON:0005068,1.97e-09,56;UBERON:0006241,1.97e-09,56;UBERON:0007135,1.97e-09,56;UBERON:0002371,2.49e-09,76;UBERON:0001474,3.12e-09,82;UBERON:0002405,3.38e-09,93;UBERON:0000073,6.99e-09,53;UBERON:0002616,6.99e-09,53;UBERON:0002780,3.16e-07,41;UBERON:0001890,3.16e-07,41;UBERON:0003080,3.16e-07,41;UBERON:0006240,3.16e-07,41 | |||
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| ||
|short_description=p1@SFSWAP | |short_description=p1@SFSWAP | ||
}} | }} |
Latest revision as of 09:29, 17 September 2015
Short description: | p1@SFSWAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SFSWAP_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000261674, ENST00000535236, ENST00000535399, ENST00000538548, ENST00000540469, ENST00000544623, NM_004592, uc001uiz.1, uc001uja.1, uc001ujb.1, uc010tbn.1_5end |
EntrezGene: | SFSWAP |
HGNC: | 10790 |
UniProt: | Q12872F5H5X1F5H1A5F5H525Q59H38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.78e-14 | 98 |
blood island | 2.78e-14 | 98 |
hemolymphoid system | 6.10e-13 | 108 |
adult organism | 4.21e-12 | 114 |
neural tube | 1.97e-09 | 56 |
neural rod | 1.97e-09 | 56 |
future spinal cord | 1.97e-09 | 56 |
neural keel | 1.97e-09 | 56 |
bone marrow | 2.49e-09 | 76 |
bone element | 3.12e-09 | 82 |
immune system | 3.38e-09 | 93 |
regional part of nervous system | 6.99e-09 | 53 |
regional part of brain | 6.99e-09 | 53 |
regional part of forebrain | 3.16e-07 | 41 |
forebrain | 3.16e-07 | 41 |
anterior neural tube | 3.16e-07 | 41 |
future forebrain | 3.16e-07 | 41 |