FFCP PHASE1:Hg19::chr1:32169580..32169599,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1307 | |EntrezGene=1307 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2193 | |HGNC=2193 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=61bp_to_ENST00000532877_5end | |association_with_transcript=61bp_to_ENST00000532877_5end | ||
|cluster_id=chr1:32169580..32169599,- | |||
|coexpression_cluster_id=C2580 | |||
|description=CAGE_peak_2_at_COL16A1_5end | |description=CAGE_peak_2_at_COL16A1_5end | ||
|id=chr1:32169580..32169599,- | |id=chr1:32169580..32169599,- | ||
|ontology_enrichment_celltype=CL:0000055!9.94e-35!180;CL:0000057!6.17e-24!75;CL:0000680!6.20e-16!57;CL:0000056!6.20e-16!57;CL:0000355!6.20e-16!57;CL:0000183!2.29e-15!59;CL:0000187!2.96e-15!54;CL:0000393!3.36e-12!60;CL:0000211!3.36e-12!60;CL:0000192!3.86e-12!42;CL:0000514!3.86e-12!42;CL:0002620!2.12e-09!23;CL:0000359!1.26e-08!32;CL:0002334!4.14e-08!12;CL:0000136!1.66e-07!15 | |ontology_enrichment_celltype=CL:0000055!9.94e-35!180;CL:0000057!6.17e-24!75;CL:0000680!6.20e-16!57;CL:0000056!6.20e-16!57;CL:0000355!6.20e-16!57;CL:0000183!2.29e-15!59;CL:0000187!2.96e-15!54;CL:0000393!3.36e-12!60;CL:0000211!3.36e-12!60;CL:0000192!3.86e-12!42;CL:0000514!3.86e-12!42;CL:0002620!2.12e-09!23;CL:0000359!1.26e-08!32;CL:0002334!4.14e-08!12;CL:0000136!1.66e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000057;1.66e-10;73!CL:0002620;8.02e-10;23!CL:0000187;2.59e-09;55!CL:0000192;2.90e-09;43!CL:0002334;1.71e-08;12!CL:0000359;2.95e-08;32!CL:0002320;4.13e-07;188!CL:0000393;9.33e-07;61!CL:0000211;9.33e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.79e-26,76;CL:0000680,8.73e-17,58;CL:0000056,8.73e-17,58;CL:0000355,8.73e-17,58;CL:0000187,4.57e-16,55;CL:0000192,8.88e-13,43;CL:0000514,8.88e-13,43;CL:0000393,1.98e-12,61;CL:0000211,1.98e-12,61;CL:0002620,6.71e-10,23;CL:0000359,1.21e-08,32;CL:0002334,1.82e-08,12;CL:0000136,7.85e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000514;2.90e-09;43!CL:0000355;3.89e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.41e-27!365;UBERON:0000914!2.01e-22!83;UBERON:0002329!2.01e-22!83;UBERON:0003077!2.01e-22!83;UBERON:0003059!2.01e-22!83;UBERON:0007282!2.01e-22!83;UBERON:0009618!2.01e-22!83;UBERON:0007285!2.01e-22!83;UBERON:0004290!1.39e-19!70;UBERON:0000486!2.37e-18!82;UBERON:0002385!2.25e-17!63;UBERON:0001015!2.25e-17!63;UBERON:0000383!2.25e-17!63;UBERON:0001134!7.27e-17!61;UBERON:0002036!7.27e-17!61;UBERON:0003082!7.27e-17!61;UBERON:0000481!1.34e-16!347;UBERON:0003102!2.62e-16!95;UBERON:0000468!6.71e-15!659;UBERON:0005256!5.85e-13!143;UBERON:0000119!2.80e-11!312;UBERON:0000483!9.58e-11!309;UBERON:0000479!1.09e-10!787;UBERON:0002199!2.20e-10!45;UBERON:0002416!2.20e-10!45;UBERON:0002100!3.03e-10!216;UBERON:0000467!2.06e-09!625;UBERON:0000033!2.29e-09!123;UBERON:0000480!3.09e-09!626;UBERON:0000924!3.28e-09!173;UBERON:0006601!3.28e-09!173;UBERON:0000153!3.44e-09!129;UBERON:0007811!3.44e-09!129;UBERON:0007023!4.29e-09!115;UBERON:0004121!5.99e-09!169;UBERON:0000922!1.57e-08!612;UBERON:0002097!1.59e-08!40;UBERON:0002050!3.46e-08!605;UBERON:0005423!3.46e-08!605;UBERON:0000477!4.62e-08!286;UBERON:0001013!5.02e-08!14;UBERON:0000923!6.94e-08!604;UBERON:0005291!6.94e-08!604;UBERON:0006598!6.94e-08!604;UBERON:0002532!6.94e-08!604;UBERON:0003104!4.12e-07!238;UBERON:0009142!4.12e-07!238;UBERON:0004111!4.53e-07!241;UBERON:0004872!9.91e-07!84 | |ontology_enrichment_uberon=UBERON:0000475!4.41e-27!365;UBERON:0000914!2.01e-22!83;UBERON:0002329!2.01e-22!83;UBERON:0003077!2.01e-22!83;UBERON:0003059!2.01e-22!83;UBERON:0007282!2.01e-22!83;UBERON:0009618!2.01e-22!83;UBERON:0007285!2.01e-22!83;UBERON:0004290!1.39e-19!70;UBERON:0000486!2.37e-18!82;UBERON:0002385!2.25e-17!63;UBERON:0001015!2.25e-17!63;UBERON:0000383!2.25e-17!63;UBERON:0001134!7.27e-17!61;UBERON:0002036!7.27e-17!61;UBERON:0003082!7.27e-17!61;UBERON:0000481!1.34e-16!347;UBERON:0003102!2.62e-16!95;UBERON:0000468!6.71e-15!659;UBERON:0005256!5.85e-13!143;UBERON:0000119!2.80e-11!312;UBERON:0000483!9.58e-11!309;UBERON:0000479!1.09e-10!787;UBERON:0002199!2.20e-10!45;UBERON:0002416!2.20e-10!45;UBERON:0002100!3.03e-10!216;UBERON:0000467!2.06e-09!625;UBERON:0000033!2.29e-09!123;UBERON:0000480!3.09e-09!626;UBERON:0000924!3.28e-09!173;UBERON:0006601!3.28e-09!173;UBERON:0000153!3.44e-09!129;UBERON:0007811!3.44e-09!129;UBERON:0007023!4.29e-09!115;UBERON:0004121!5.99e-09!169;UBERON:0000922!1.57e-08!612;UBERON:0002097!1.59e-08!40;UBERON:0002050!3.46e-08!605;UBERON:0005423!3.46e-08!605;UBERON:0000477!4.62e-08!286;UBERON:0001013!5.02e-08!14;UBERON:0000923!6.94e-08!604;UBERON:0005291!6.94e-08!604;UBERON:0006598!6.94e-08!604;UBERON:0002532!6.94e-08!604;UBERON:0003104!4.12e-07!238;UBERON:0009142!4.12e-07!238;UBERON:0004111!4.53e-07!241;UBERON:0004872!9.91e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.54e-10;31!UBERON:0001015;5.54e-10;31!UBERON:0000383;5.54e-10;31!UBERON:0001013;2.22e-08;14!UBERON:0002384;3.93e-08;198!UBERON:0003102;1.68e-07;50!UBERON:0002199;2.10e-07;46!UBERON:0002416;2.10e-07;46!UBERON:0002097;4.88e-07;41 | |||
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| ||
|short_description=p2@COL16A1 | |short_description=p2@COL16A1 | ||
}} | }} |
Latest revision as of 13:44, 17 September 2015
Short description: | p2@COL16A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL16A1_5end |
Coexpression cluster: | C2580_Fibroblast_Preadipocyte_Pericytes_Adipocyte_Hair_Ewing_Mesenchymal |
Association with transcript: | 61bp_to_ENST00000532877_5end |
EntrezGene: | COL16A1 |
HGNC: | 2193 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.79e-26 | 76 |
muscle precursor cell | 8.73e-17 | 58 |
myoblast | 8.73e-17 | 58 |
multi-potent skeletal muscle stem cell | 8.73e-17 | 58 |
muscle cell | 4.57e-16 | 55 |
smooth muscle cell | 8.88e-13 | 43 |
smooth muscle myoblast | 8.88e-13 | 43 |
electrically responsive cell | 1.98e-12 | 61 |
electrically active cell | 1.98e-12 | 61 |
skin fibroblast | 6.71e-10 | 23 |
vascular associated smooth muscle cell | 1.21e-08 | 32 |
preadipocyte | 1.82e-08 | 12 |
fat cell | 7.85e-08 | 15 |