FFCP PHASE1:Hg19::chr6:2971973..2971994,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5269 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8950 | |||
|TSSclassifier=strong | |||
|UniProt=P35237 | |||
|association_with_transcript=95bp_to_ENST00000335686,uc003mum.2_5end | |||
|cluster_id=chr6:2971973..2971994,- | |||
|description=CAGE_peak_7_at_SERPINB6_5end | |||
|id=chr6:2971973..2971994,- | |||
|ontology_enrichment_celltype=CL:0000222!2.80e-21!119;CL:0000055!6.16e-21!180;CL:0000183!2.85e-12!59;CL:0000680!3.69e-12!57;CL:0000056!3.69e-12!57;CL:0000355!3.69e-12!57;CL:0000187!1.28e-11!54;CL:0000192!1.08e-10!42;CL:0000514!1.08e-10!42;CL:0000213!1.18e-10!57;CL:0000215!1.18e-10!57;CL:0000115!1.53e-10!35;CL:0000393!5.98e-10!60;CL:0000211!5.98e-10!60;CL:0000359!7.75e-10!32;CL:0000220!1.45e-09!246;CL:0002139!1.80e-09!24;CL:0002321!4.63e-09!248;CL:0002078!9.25e-09!44;CL:0000057!2.07e-08!75;CL:0000071!1.70e-07!18;CL:0002546!1.70e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.16e-10;24!CL:0000115;1.53e-09;36!CL:0000359;4.22e-09;32!CL:0000192;2.68e-08;43!CL:0000071;4.07e-08;18!CL:0000213;6.54e-07;58!CL:0000215;6.54e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.25e-22,121;CL:0000680,2.41e-13,58;CL:0000056,2.41e-13,58;CL:0000355,2.41e-13,58;CL:0000187,9.14e-13,55;CL:0000192,1.34e-11,43;CL:0000514,1.34e-11,43;CL:0000393,3.48e-11,61;CL:0000211,3.48e-11,61;CL:0000115,5.11e-11,36;CL:0000213,1.18e-10,58;CL:0000215,1.18e-10,58;CL:0000359,2.09e-10,32;CL:0002139,5.14e-10,24;CL:0002078,3.50e-09,45;CL:0002321,1.37e-08,250;CL:0000057,1.94e-08,76;CL:0000071,6.62e-08,18;CL:0002546,6.62e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000514;2.68e-08;43!CL:0002546;4.07e-08;18!CL:0000222;2.96e-07;121!CL:0000355;4.99e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.48e-23!79;UBERON:0007798!7.48e-23!79;UBERON:0004872!5.88e-20!84;UBERON:0000055!1.52e-19!69;UBERON:0001009!2.06e-19!113;UBERON:0001981!1.89e-18!60;UBERON:0007500!1.89e-18!60;UBERON:0004537!1.89e-18!60;UBERON:0006965!1.89e-18!60;UBERON:0004535!3.49e-18!110;UBERON:0003914!1.89e-17!118;UBERON:0000477!3.99e-16!286;UBERON:0000481!9.75e-15!347;UBERON:0000468!1.11e-14!659;UBERON:0001637!4.63e-14!42;UBERON:0003509!4.63e-14!42;UBERON:0004572!4.63e-14!42;UBERON:0000490!1.44e-13!138;UBERON:0000467!3.40e-13!625;UBERON:0000480!6.83e-13!626;UBERON:0000914!1.06e-12!83;UBERON:0002329!1.06e-12!83;UBERON:0003077!1.06e-12!83;UBERON:0003059!1.06e-12!83;UBERON:0007282!1.06e-12!83;UBERON:0009618!1.06e-12!83;UBERON:0007285!1.06e-12!83;UBERON:0005256!1.13e-12!143;UBERON:0004111!1.17e-12!241;UBERON:0004290!1.92e-12!70;UBERON:0000119!3.64e-12!312;UBERON:0002100!3.67e-12!216;UBERON:0002385!7.01e-12!63;UBERON:0001015!7.01e-12!63;UBERON:0000383!7.01e-12!63;UBERON:0000483!9.05e-12!309;UBERON:0003104!1.09e-11!238;UBERON:0009142!1.09e-11!238;UBERON:0001134!1.77e-11!61;UBERON:0002036!1.77e-11!61;UBERON:0003082!1.77e-11!61;UBERON:0004573!6.21e-11!33;UBERON:0004571!6.21e-11!33;UBERON:0000926!6.28e-11!448;UBERON:0004120!6.28e-11!448;UBERON:0006603!6.28e-11!448;UBERON:0000025!1.06e-10!194;UBERON:0000475!6.86e-10!365;UBERON:0002050!1.14e-09!605;UBERON:0005423!1.14e-09!605;UBERON:0000923!1.86e-09!604;UBERON:0005291!1.86e-09!604;UBERON:0006598!1.86e-09!604;UBERON:0002532!1.86e-09!604;UBERON:0000486!2.38e-09!82;UBERON:0000922!4.47e-09!612;UBERON:0007100!2.98e-08!27;UBERON:0001986!1.70e-07!18;UBERON:0004638!1.70e-07!18;UBERON:0004852!1.70e-07!18;UBERON:0003103!3.20e-07!69;UBERON:0006914!4.62e-07!25;UBERON:0000948!5.25e-07!24;UBERON:0005498!5.25e-07!24;UBERON:0004140!5.25e-07!24;UBERON:0009881!5.25e-07!24;UBERON:0004141!5.25e-07!24;UBERON:0003084!5.25e-07!24;UBERON:0007005!5.25e-07!24;UBERON:0004139!5.25e-07!24;UBERON:0004291!5.25e-07!24;UBERON:0000487!5.25e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.07e-10;42!UBERON:0003509;2.07e-10;42!UBERON:0004572;2.07e-10;42!UBERON:0007500;2.81e-10;56!UBERON:0001981;2.81e-10;56!UBERON:0004537;2.81e-10;56!UBERON:0004573;5.84e-10;33!UBERON:0004571;5.84e-10;33!UBERON:0000055;7.63e-10;65!UBERON:0002049;2.02e-09;75!UBERON:0007798;2.02e-09;75!UBERON:0004638;4.07e-08;18!UBERON:0001986;4.07e-08;18!UBERON:0004852;4.07e-08;18!UBERON:0007100;1.03e-07;25!UBERON:0000487;2.69e-07;22!UBERON:0006914;4.22e-07;25!UBERON:0003914;6.46e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,6.71e-24,78;UBERON:0007798,6.71e-24,78;UBERON:0001009,8.28e-21,112;UBERON:0004872,1.01e-20,83;UBERON:0000055,1.40e-20,68;UBERON:0004535,1.73e-19,109;UBERON:0007500,3.33e-19,59;UBERON:0001981,3.33e-19,59;UBERON:0004537,3.33e-19,59;UBERON:0006965,3.33e-19,59;UBERON:0003914,9.79e-18,117;UBERON:0000490,1.35e-15,148;UBERON:0003104,2.34e-15,160;UBERON:0009142,2.34e-15,160;UBERON:0007503,6.13e-15,78;UBERON:0001637,6.41e-15,42;UBERON:0003509,6.41e-15,42;UBERON:0004572,6.41e-15,42;UBERON:0005256,8.94e-14,122;UBERON:0007524,9.90e-14,73;UBERON:0002329,2.59e-13,71;UBERON:0003059,2.59e-13,71;UBERON:0007282,2.59e-13,71;UBERON:0004290,2.59e-13,71;UBERON:0009618,2.59e-13,71;UBERON:0003077,2.70e-13,72;UBERON:0007285,2.70e-13,72;UBERON:0002385,5.56e-13,64;UBERON:0001015,5.56e-13,64;UBERON:0000383,5.56e-13,64;UBERON:0001134,1.50e-12,62;UBERON:0002036,1.50e-12,62;UBERON:0003082,1.50e-12,62;UBERON:0004573,1.41e-11,33;UBERON:0004571,1.41e-11,33;UBERON:0000119,4.49e-11,309;UBERON:0004111,6.69e-11,240;UBERON:0002100,9.30e-11,199;UBERON:0000483,1.11e-10,306;UBERON:0000025,2.88e-09,192;UBERON:0000486,3.79e-09,83;UBERON:0007100,1.33e-08,27;UBERON:0004638,6.62e-08,18;UBERON:0001986,6.62e-08,18;UBERON:0004852,6.62e-08,18;UBERON:0000948,2.83e-07,24;UBERON:0005498,2.83e-07,24;UBERON:0004140,2.83e-07,24;UBERON:0009881,2.83e-07,24;UBERON:0004141,2.83e-07,24;UBERON:0003084,2.83e-07,24;UBERON:0007005,2.83e-07,24;UBERON:0004139,2.83e-07,24;UBERON:0004291,2.83e-07,24;UBERON:0000926,3.52e-07,315;UBERON:0004120,3.52e-07,315;UBERON:0006603,3.52e-07,315;UBERON:0000487,4.49e-07,22;UBERON:0003103,5.56e-07,68;UBERON:0006914,5.77e-07,25 | |||
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| |||
|short_description=p7@SERPINB6 | |||
}} |
Latest revision as of 14:40, 17 September 2015
Short description: | p7@SERPINB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SERPINB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 95bp_to_ENST00000335686, uc003mum.2_5end |
EntrezGene: | SERPINB6 |
HGNC: | 8950 |
UniProt: | P35237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.25e-22 | 121 |
muscle precursor cell | 2.41e-13 | 58 |
myoblast | 2.41e-13 | 58 |
multi-potent skeletal muscle stem cell | 2.41e-13 | 58 |
muscle cell | 9.14e-13 | 55 |
smooth muscle cell | 1.34e-11 | 43 |
smooth muscle myoblast | 1.34e-11 | 43 |
electrically responsive cell | 3.48e-11 | 61 |
electrically active cell | 3.48e-11 | 61 |
endothelial cell | 5.11e-11 | 36 |
lining cell | 1.18e-10 | 58 |
barrier cell | 1.18e-10 | 58 |
vascular associated smooth muscle cell | 2.09e-10 | 32 |
endothelial cell of vascular tree | 5.14e-10 | 24 |
meso-epithelial cell | 3.50e-09 | 45 |
embryonic cell | 1.37e-08 | 250 |
fibroblast | 1.94e-08 | 76 |
blood vessel endothelial cell | 6.62e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.62e-08 | 18 |