FFCP PHASE1:Hg19::chr11:33183048..33183070,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1479 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2485 | |||
|TSSclassifier=strong | |||
|UniProt=Q96QK4 | |||
|association_with_transcript=6bp_to_ENST00000438862_5end | |||
|cluster_id=chr11:33183048..33183070,- | |||
|description=CAGE_peak_2_at_CSTF3_5end | |||
|id=chr11:33183048..33183070,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.65e-15!94;UBERON:0001016!1.65e-15!94;UBERON:0005743!2.38e-14!86;UBERON:0001017!9.80e-14!82;UBERON:0000955!2.33e-13!69;UBERON:0006238!2.33e-13!69;UBERON:0001049!4.41e-12!57;UBERON:0005068!4.41e-12!57;UBERON:0006241!4.41e-12!57;UBERON:0007135!4.41e-12!57;UBERON:0003075!2.17e-11!86;UBERON:0007284!2.17e-11!86;UBERON:0002346!5.66e-11!90;UBERON:0002616!7.29e-11!59;UBERON:0000119!1.05e-10!312;UBERON:0000483!2.26e-10!309;UBERON:0004121!2.35e-10!169;UBERON:0000924!3.53e-10!173;UBERON:0006601!3.53e-10!173;UBERON:0000153!6.33e-10!129;UBERON:0007811!6.33e-10!129;UBERON:0002780!7.41e-10!41;UBERON:0001890!7.41e-10!41;UBERON:0006240!7.41e-10!41;UBERON:0000033!7.68e-10!123;UBERON:0003080!2.31e-09!42;UBERON:0003056!7.71e-09!61;UBERON:0002020!2.22e-08!34;UBERON:0003528!2.22e-08!34;UBERON:0001893!3.80e-08!34;UBERON:0000477!4.06e-08!286;UBERON:0001869!4.33e-08!32;UBERON:0002791!5.24e-08!33;UBERON:0000475!6.29e-08!365;UBERON:0000481!8.41e-08!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.81e-08;32!UBERON:0002791;1.02e-07;32!UBERON:0002780;1.13e-07;41!UBERON:0001890;1.13e-07;41!UBERON:0003528;1.42e-07;34!UBERON:0002020;1.42e-07;34!UBERON:0001893;1.61e-07;34!UBERON:0000955;1.71e-07;68!UBERON:0001016;2.51e-07;83!UBERON:0000073;2.77e-07;53!UBERON:0002616;2.77e-07;53!UBERON:0001017;8.77e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.50e-15,89;UBERON:0001017,3.38e-14,81;UBERON:0000955,7.35e-14,68;UBERON:0006238,7.35e-14,68;UBERON:0001049,1.31e-12,56;UBERON:0005068,1.31e-12,56;UBERON:0006241,1.31e-12,56;UBERON:0007135,1.31e-12,56;UBERON:0000073,1.12e-11,53;UBERON:0002616,1.12e-11,53;UBERON:0003075,3.50e-11,82;UBERON:0007284,3.50e-11,82;UBERON:0010314,7.26e-11,132;UBERON:0002346,1.08e-10,86;UBERON:0000119,3.79e-10,309;UBERON:0002780,6.92e-10,41;UBERON:0001890,6.92e-10,41;UBERON:0003080,6.92e-10,41;UBERON:0006240,6.92e-10,41;UBERON:0000483,7.97e-10,306;UBERON:0003056,9.98e-10,61;UBERON:0004121,3.98e-09,171;UBERON:0000924,3.98e-09,171;UBERON:0006601,3.98e-09,171;UBERON:0010371,4.37e-09,104;UBERON:0011216,1.66e-08,223;UBERON:0003528,2.10e-08,34;UBERON:0002020,2.10e-08,34;UBERON:0001893,3.60e-08,34;UBERON:0001869,4.10e-08,32;UBERON:0002791,4.65e-08,32 | |||
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| |||
|short_description=p2@CSTF3 | |||
}} |
Latest revision as of 16:24, 17 September 2015
Short description: | p2@CSTF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CSTF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000438862_5end |
EntrezGene: | CSTF3 |
HGNC: | 2485 |
UniProt: | Q96QK4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.50e-15 | 89 |
central nervous system | 3.38e-14 | 81 |
brain | 7.35e-14 | 68 |
future brain | 7.35e-14 | 68 |
neural tube | 1.31e-12 | 56 |
neural rod | 1.31e-12 | 56 |
future spinal cord | 1.31e-12 | 56 |
neural keel | 1.31e-12 | 56 |
regional part of nervous system | 1.12e-11 | 53 |
regional part of brain | 1.12e-11 | 53 |
neural plate | 3.50e-11 | 82 |
presumptive neural plate | 3.50e-11 | 82 |
structure with developmental contribution from neural crest | 7.26e-11 | 132 |
neurectoderm | 1.08e-10 | 86 |
cell layer | 3.79e-10 | 309 |
regional part of forebrain | 6.92e-10 | 41 |
forebrain | 6.92e-10 | 41 |
anterior neural tube | 6.92e-10 | 41 |
future forebrain | 6.92e-10 | 41 |
epithelium | 7.97e-10 | 306 |
pre-chordal neural plate | 9.98e-10 | 61 |
ectoderm-derived structure | 3.98e-09 | 171 |
ectoderm | 3.98e-09 | 171 |
presumptive ectoderm | 3.98e-09 | 171 |
ecto-epithelium | 4.37e-09 | 104 |
organ system subdivision | 1.66e-08 | 223 |
brain grey matter | 2.10e-08 | 34 |
gray matter | 2.10e-08 | 34 |
telencephalon | 3.60e-08 | 34 |
cerebral hemisphere | 4.10e-08 | 32 |
regional part of telencephalon | 4.65e-08 | 32 |