FFCP PHASE1:Hg19::chr2:61698265..61698274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9736 | |EntrezGene=9736 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20066 | |HGNC=20066 | ||
|TSSclassifier=strong | |||
|UniProt=Q70CQ2 | |UniProt=Q70CQ2 | ||
|association_with_transcript=-361bp_to_ENST00000398571_5end | |association_with_transcript=-361bp_to_ENST00000398571_5end | ||
|cluster_id=chr2:61698265..61698274,- | |||
|description=CAGE_peak_8_at_USP34_5end | |description=CAGE_peak_8_at_USP34_5end | ||
|id=chr2:61698265..61698274,- | |id=chr2:61698265..61698274,- | ||
|ontology_enrichment_celltype=CL:0002057!3.87e-11!42;CL:0000860!1.80e-10!45;CL:0000738!5.98e-10!140;CL:0000037!7.30e-10!172;CL:0000566!7.30e-10!172;CL:0002032!9.74e-10!165;CL:0000837!9.74e-10!165;CL:0002031!1.34e-09!124;CL:0000988!2.57e-09!182;CL:0000766!9.55e-09!76;CL:0000839!2.58e-08!70;CL:0000763!2.67e-08!112;CL:0000049!2.67e-08!112;CL:0002087!3.25e-08!119;CL:0000557!4.33e-08!71 | |ontology_enrichment_celltype=CL:0002057!3.87e-11!42;CL:0000860!1.80e-10!45;CL:0000738!5.98e-10!140;CL:0000037!7.30e-10!172;CL:0000566!7.30e-10!172;CL:0002032!9.74e-10!165;CL:0000837!9.74e-10!165;CL:0002031!1.34e-09!124;CL:0000988!2.57e-09!182;CL:0000766!9.55e-09!76;CL:0000839!2.58e-08!70;CL:0000763!2.67e-08!112;CL:0000049!2.67e-08!112;CL:0002087!3.25e-08!119;CL:0000557!4.33e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.08e-08;33!CL:0002057;6.08e-08;33 | |ontology_enrichment_celltype_v019=CL:0000860;6.08e-08;33!CL:0002057;6.08e-08;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.18e-12,136;CL:0002032,7.41e-11,161;CL:0000837,7.41e-11,161;CL:0002031,7.79e-11,120;CL:0000037,1.68e-10,168;CL:0000766,3.27e-10,72;CL:0000988,2.63e-09,177;CL:0002087,1.03e-08,115;CL:0000839,8.05e-08,66;CL:0000860,1.30e-07,42;CL:0002057,1.30e-07,42;CL:0000557,1.63e-07,67;CL:0000763,2.53e-07,108;CL:0000049,2.53e-07,108 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.55e-27!115;UBERON:0001049!3.42e-13!57;UBERON:0005068!3.42e-13!57;UBERON:0006241!3.42e-13!57;UBERON:0007135!3.42e-13!57;UBERON:0003080!3.12e-11!42;UBERON:0002780!8.86e-11!41;UBERON:0001890!8.86e-11!41;UBERON:0006240!8.86e-11!41;UBERON:0002616!9.64e-11!59;UBERON:0001017!5.58e-09!82;UBERON:0002020!6.53e-09!34;UBERON:0003528!6.53e-09!34;UBERON:0002390!9.49e-09!102;UBERON:0003061!9.49e-09!102;UBERON:0000955!1.10e-08!69;UBERON:0006238!1.10e-08!69;UBERON:0001893!1.17e-08!34;UBERON:0002791!2.56e-08!33;UBERON:0002619!2.75e-08!22;UBERON:0001869!3.27e-08!32;UBERON:0003075!4.24e-08!86;UBERON:0007284!4.24e-08!86;UBERON:0005743!6.60e-08!86;UBERON:0002193!8.53e-08!112;UBERON:0000073!1.23e-07!94;UBERON:0001016!1.23e-07!94;UBERON:0002346!1.46e-07!90;UBERON:0000956!3.31e-07!25;UBERON:0000203!3.31e-07!25;UBERON:0001950!3.32e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!2.55e-27!115;UBERON:0001049!3.42e-13!57;UBERON:0005068!3.42e-13!57;UBERON:0006241!3.42e-13!57;UBERON:0007135!3.42e-13!57;UBERON:0003080!3.12e-11!42;UBERON:0002780!8.86e-11!41;UBERON:0001890!8.86e-11!41;UBERON:0006240!8.86e-11!41;UBERON:0002616!9.64e-11!59;UBERON:0001017!5.58e-09!82;UBERON:0002020!6.53e-09!34;UBERON:0003528!6.53e-09!34;UBERON:0002390!9.49e-09!102;UBERON:0003061!9.49e-09!102;UBERON:0000955!1.10e-08!69;UBERON:0006238!1.10e-08!69;UBERON:0001893!1.17e-08!34;UBERON:0002791!2.56e-08!33;UBERON:0002619!2.75e-08!22;UBERON:0001869!3.27e-08!32;UBERON:0003075!4.24e-08!86;UBERON:0007284!4.24e-08!86;UBERON:0005743!6.60e-08!86;UBERON:0002193!8.53e-08!112;UBERON:0000073!1.23e-07!94;UBERON:0001016!1.23e-07!94;UBERON:0002346!1.46e-07!90;UBERON:0000956!3.31e-07!25;UBERON:0000203!3.31e-07!25;UBERON:0001950!3.32e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.11e-11;22!UBERON:0000956;3.97e-09;25!UBERON:0000203;3.97e-09;25!UBERON:0002780;4.89e-09;41!UBERON:0001890;4.89e-09;41!UBERON:0001950;9.83e-09;20!UBERON:0000073;2.83e-08;53!UBERON:0002616;2.83e-08;53!UBERON:0001869;6.90e-08;32!UBERON:0003528;1.15e-07;34!UBERON:0002020;1.15e-07;34!UBERON:0003296;1.76e-07;4!UBERON:0010133;1.76e-07;4!UBERON:0002791;9.63e-07;32!UBERON:0007023;9.74e-07;114 | |ontology_enrichment_uberon_v019=UBERON:0002619;8.11e-11;22!UBERON:0000956;3.97e-09;25!UBERON:0000203;3.97e-09;25!UBERON:0002780;4.89e-09;41!UBERON:0001890;4.89e-09;41!UBERON:0001950;9.83e-09;20!UBERON:0000073;2.83e-08;53!UBERON:0002616;2.83e-08;53!UBERON:0001869;6.90e-08;32!UBERON:0003528;1.15e-07;34!UBERON:0002020;1.15e-07;34!UBERON:0003296;1.76e-07;4!UBERON:0010133;1.76e-07;4!UBERON:0002791;9.63e-07;32!UBERON:0007023;9.74e-07;114 | ||
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|phase1_expression=0.181678379270557,0,0.422863212287913,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0.61130724598361,0.164201178899891,0.393553906568396,1.18009283054671,0,0.309632246632152,0,0,0.369754010166788,1.78174561334694,0.142169232487422,0.293600439334847,1.10799081706375,1.00272223735071,0.868043482863407,0.223915474239924,1.94336199611388,1.03030227053675,0.581592955118259,0.755751887377619,1.69808842831471,0.929716147622738,1.23350366406548,0.929119112685311,1.1507695692886,0.512321413058201,1.18241114944293,1.03423704220986,1.29096936716765,1.35426486594342,0.752969358170419,1.09162460023138,1.12361742222542,1.22433556948361,0.641858054152187,1.91801137739712,0.659702600373432,0.997318288108159,1.70489900213078,1.16083695451434,0,1.86846674698672,2.26123798731069,0.521482918420201,0.434377689410233,0.605399502633369,2.94622108790052,1.58231193720442,0.422510572623884,0,0.419317291016752,0.22465726229299,0.600707571366025,0.964353520182481,0.855038231223746,0.79566670879636,0.91332076882317,0,0,0,1.28019066769952,0,2.29900975981793,0.661044872784862,0,2.27685187643779,1.17447437874188,2.6759125968766,0,1.12101712596307,0.526768169550154,1.57367816091066,0.786021525498329,1.23360899399706,0.167186495390678,0.651844533267181,0.473447805734733,3.89653456815823,0.334231370655521,0.589211814949674,0.443067789167242,0.270803863765016,0.512365278902701,0.390178042679635,0.657751618414705,0.552700035571697,0,0.444859689486181,0.535081656179426,0,0.339928028092699,1.14966148080576,0,1.26509846009751,1.59282707162048,0,0,1.05402583354441,1.02389288923535,0,0.947109008176067,1.64225599384209,1.81446068902259,1.87208137048455,0.868946423296794,0,0,0.639312809217652,0,0,0,0,0,0.189069634328136,0.221729397462564,0.263504357079378,0.523916301990851,0,0.370784442784429,0,0,0.26591592103773,0.953962497221368,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0.24406205754817,1.10298924103761,0,0.357198913136319,0.898117490504679,0.337834441449967,0,0,0.366403487860815,2.63560834872127,3.87780264148325,0,0.496971951695318,0,0.529636723252875,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0.622422070799533,0.404132016209064,0,0,0.576175924479999,0.234321431833797,0.312160076830321,0,0.298897361103602,0.23486899728753,0.323745888736263,0.280901613404497,0,0.245668634623536,0.103325781175765,0,0.989067717114227,0,0,0,0,0.554128230968366,0,0,0.600952235626387,0.113432183160021,0.538168907066586,0.213557388818567,0.423863802319124,0.900273288253207,0.618315175430633,0.257640540045629,0.18611685633159,0.168776332241266,0.487185025805993,0.757301322732344,0.460249493211497,0,0.710019185033229,0,0.169560592310488,0.773043412653187,0.272746120590835,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0.441463099414651,0.122988438543114,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.469634776943287,0.288732895522148,0.462985512576611,0,0.790204397959275,0,0.246217006087397,0,0.594524649154913,0.93733833986777,0,0.283550194484773,0.268675568108545,0,0,2.46331618947972,0.264145302039678,1.4512968087854,1.15295962733569,1.51490920111656,0.126995788584338,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0,1.04007436911366,0,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0.958499421966331,0,0,0.579125226670317,0.821905290201534,0.358121926479791,0,1.77327684181734,0.646882724578552,0.513372145118994,0.508189248444927,1.30139853857622,0,0.167516265334349,0.637938751653163,3.74503511973591,0,2.07207756718018,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.468565659970853,0.300946099727719,0,0,0,0,0.0868836144680828,0,0.686286847621712,1.44737618286021,0.862856803274467,0.960548020230999,0,0,0,0.496215615637554,0.306923946576125,0.841980283299221,0.384417447767103,0,0.64341568457443,0,0.308419387605311,0.532685175939381,0.164254312027618,0.519254429183621,0.348631135379878,0.362578348774867,0.40101294060657,0.184161977871793,0,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0,1.97333888981341,0.784306353074702,0,0,0,0.9273691048295,0.27470839445503,0.742585499285292,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0.322260734604821,0.290033387828457,0.255679882248303,0.356128142586949,0.495854746082934,0.192190067365106,0.510450849978337,0.50578890427775,0,1.88887408098384,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0.42793898803392,0.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| ||
|short_description=p8@USP34 | |short_description=p8@USP34 | ||
}} | }} |
Latest revision as of 21:22, 17 September 2015
Short description: | p8@USP34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_USP34_5end |
Coexpression cluster: | NA |
Association with transcript: | -361bp_to_ENST00000398571_5end |
EntrezGene: | USP34 |
HGNC: | 20066 |
UniProt: | Q70CQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.18e-12 | 136 |
hematopoietic oligopotent progenitor cell | 7.41e-11 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 7.79e-11 | 120 |
hematopoietic stem cell | 1.68e-10 | 168 |
myeloid leukocyte | 3.27e-10 | 72 |
hematopoietic cell | 2.63e-09 | 177 |
nongranular leukocyte | 1.03e-08 | 115 |
myeloid lineage restricted progenitor cell | 8.05e-08 | 66 |
classical monocyte | 1.30e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-07 | 42 |
granulocyte monocyte progenitor cell | 1.63e-07 | 67 |
myeloid cell | 2.53e-07 | 108 |
common myeloid progenitor | 2.53e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.48e-20 | 114 |
neural tube | 1.10e-14 | 56 |
neural rod | 1.10e-14 | 56 |
future spinal cord | 1.10e-14 | 56 |
neural keel | 1.10e-14 | 56 |
regional part of nervous system | 1.24e-14 | 53 |
regional part of brain | 1.24e-14 | 53 |
regional part of forebrain | 7.99e-12 | 41 |
forebrain | 7.99e-12 | 41 |
anterior neural tube | 7.99e-12 | 41 |
future forebrain | 7.99e-12 | 41 |
neural plate | 2.86e-11 | 82 |
presumptive neural plate | 2.86e-11 | 82 |
regional part of cerebral cortex | 4.03e-11 | 22 |
neurectoderm | 2.44e-10 | 86 |
brain | 1.67e-09 | 68 |
future brain | 1.67e-09 | 68 |
cerebral cortex | 2.18e-09 | 25 |
pallium | 2.18e-09 | 25 |
central nervous system | 4.01e-09 | 81 |
brain grey matter | 4.25e-09 | 34 |
gray matter | 4.25e-09 | 34 |
neocortex | 6.64e-09 | 20 |
cerebral hemisphere | 1.41e-08 | 32 |
nervous system | 2.83e-08 | 89 |
pre-chordal neural plate | 5.38e-08 | 61 |
telencephalon | 7.56e-08 | 34 |
gland of diencephalon | 8.08e-08 | 4 |
neuroendocrine gland | 8.08e-08 | 4 |
regional part of telencephalon | 1.42e-07 | 32 |
ecto-epithelium | 4.01e-07 | 104 |