FFCP PHASE1:Hg19::chr19:39826639..39826719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9535 | |EntrezGene=9535 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4374 | |HGNC=4374 | ||
|TSSclassifier=strong | |||
|UniProt=O60234,Q6IB37 | |UniProt=O60234,Q6IB37 | ||
|association_with_transcript=6bp_to_ENST00000253054,NM_004877,uc002okx.3,uc002okz.3_5end | |association_with_transcript=6bp_to_ENST00000253054,NM_004877,uc002okx.3,uc002okz.3_5end | ||
|cluster_id=chr19:39826639..39826719,- | |||
|coexpression_cluster_id=C57 | |coexpression_cluster_id=C57 | ||
|description=CAGE_peak_1_at_GMFG_5end | |description=CAGE_peak_1_at_GMFG_5end | ||
|id=chr19:39826639..39826719,- | |id=chr19:39826639..39826719,- | ||
|ontology_enrichment_celltype=CL:0000037!1.18e-74!172;CL:0000566!1.18e-74!172;CL:0000988!5.60e-71!182;CL:0002032!3.73e-70!165;CL:0000837!3.73e-70!165;CL:0000738!6.98e-60!140;CL:0002031!7.06e-50!124;CL:0002087!5.95e-49!119;CL:0000763!1.01e-42!112;CL:0000049!1.01e-42!112;CL:0000766!7.41e-30!76;CL:0000557!2.34e-25!71;CL:0000839!5.99e-25!70;CL:0002009!1.63e-23!65;CL:0000542!2.69e-23!53;CL:0000051!2.69e-23!53;CL:0002194!5.37e-23!63;CL:0000576!5.37e-23!63;CL:0000040!5.37e-23!63;CL:0000559!5.37e-23!63;CL:0000838!5.66e-23!52;CL:0002057!3.50e-20!42;CL:0000134!5.25e-18!358;CL:0000860!2.00e-17!45;CL:0002320!1.18e-16!365;CL:0000084!9.56e-14!25;CL:0000827!9.56e-14!25;CL:0000219!7.36e-12!390;CL:0000791!4.20e-11!18;CL:0000789!4.20e-11!18;CL:0002420!4.20e-11!18;CL:0002419!4.20e-11!18;CL:0000790!4.20e-11!18;CL:0000048!1.29e-09!430;CL:0000945!1.83e-09!24;CL:0000826!1.83e-09!24;CL:0000034!8.68e-09!444;CL:0000723!1.99e-08!436;CL:0000625!2.24e-07!11;CL:0000236!2.35e-07!14;CL:0000115!2.72e-07!35;CL:0002393!7.41e-07!9;CL:0002397!7.41e-07!9;CL:0000094!9.51e-07!8 | |ontology_enrichment_celltype=CL:0000037!1.18e-74!172;CL:0000566!1.18e-74!172;CL:0000988!5.60e-71!182;CL:0002032!3.73e-70!165;CL:0000837!3.73e-70!165;CL:0000738!6.98e-60!140;CL:0002031!7.06e-50!124;CL:0002087!5.95e-49!119;CL:0000763!1.01e-42!112;CL:0000049!1.01e-42!112;CL:0000766!7.41e-30!76;CL:0000557!2.34e-25!71;CL:0000839!5.99e-25!70;CL:0002009!1.63e-23!65;CL:0000542!2.69e-23!53;CL:0000051!2.69e-23!53;CL:0002194!5.37e-23!63;CL:0000576!5.37e-23!63;CL:0000040!5.37e-23!63;CL:0000559!5.37e-23!63;CL:0000838!5.66e-23!52;CL:0002057!3.50e-20!42;CL:0000134!5.25e-18!358;CL:0000860!2.00e-17!45;CL:0002320!1.18e-16!365;CL:0000084!9.56e-14!25;CL:0000827!9.56e-14!25;CL:0000219!7.36e-12!390;CL:0000791!4.20e-11!18;CL:0000789!4.20e-11!18;CL:0002420!4.20e-11!18;CL:0002419!4.20e-11!18;CL:0000790!4.20e-11!18;CL:0000048!1.29e-09!430;CL:0000945!1.83e-09!24;CL:0000826!1.83e-09!24;CL:0000034!8.68e-09!444;CL:0000723!1.99e-08!436;CL:0000625!2.24e-07!11;CL:0000236!2.35e-07!14;CL:0000115!2.72e-07!35;CL:0002393!7.41e-07!9;CL:0002397!7.41e-07!9;CL:0000094!9.51e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000576;2.18e-15;48!CL:0000542;6.81e-15;53!CL:0000766;7.59e-15;69!CL:0002087;1.13e-14;104!CL:0000084;1.33e-14;25!CL:0000860;2.04e-14;33!CL:0002057;2.04e-14;33!CL:0000763;2.16e-14;100!CL:0000738;3.70e-14;136!CL:0000473;3.90e-14;39!CL:0000234;3.90e-14;39!CL:0000988;3.66e-13;177!CL:0000791;8.93e-12;18!CL:0000789;8.93e-12;18!CL:0002419;8.93e-12;18!CL:0000945;5.14e-10;24!CL:0000625;8.72e-08;11!CL:0000236;1.46e-07;13!CL:0000094;4.06e-07;8!CL:0002139;9.61e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.23e-83,168;CL:0002032,2.34e-78,161;CL:0000837,2.34e-78,161;CL:0000988,1.75e-77,177;CL:0000738,2.08e-67,136;CL:0002031,1.46e-56,120;CL:0002087,1.24e-55,115;CL:0000763,8.69e-49,108;CL:0000049,8.69e-49,108;CL:0000766,4.02e-35,72;CL:0000557,4.45e-30,67;CL:0000839,1.23e-29,66;CL:0002009,3.85e-28,61;CL:0002194,1.31e-27,59;CL:0000576,1.31e-27,59;CL:0000040,1.31e-27,59;CL:0000559,1.31e-27,59;CL:0000542,7.84e-25,53;CL:0000051,7.84e-25,53;CL:0000838,1.74e-24,52;CL:0000473,7.67e-24,48;CL:0000234,7.67e-24,48;CL:0000860,1.70e-21,42;CL:0002057,1.70e-21,42;CL:0000134,2.40e-17,354;CL:0002320,2.99e-16,361;CL:0000084,1.33e-14,25;CL:0000827,1.33e-14,25;CL:0000791,8.93e-12,18;CL:0000789,8.93e-12,18;CL:0002420,8.93e-12,18;CL:0002419,8.93e-12,18;CL:0000790,8.93e-12,18;CL:0000219,1.70e-11,386;CL:0000945,5.07e-10,24;CL:0000826,5.07e-10,24;CL:0000625,8.68e-08,11;CL:0000236,9.13e-08,14;CL:0000048,1.24e-07,427;CL:0000115,2.11e-07,36;CL:0002393,3.12e-07,9;CL:0002397,3.12e-07,9;CL:0000094,4.08e-07,8;CL:0000723,9.23e-07,433;CL:0002139,9.44e-07,24;CL:0000034,9.90e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-15;42!CL:0000051;6.81e-15;53!CL:0000049;1.01e-13;108!CL:0000790;8.93e-12;18 | |||
|ontology_enrichment_disease=DOID:2531!1.46e-18!51;DOID:0060083!1.46e-18!51;DOID:1240!8.54e-16!39;DOID:8692!1.59e-12!31 | |ontology_enrichment_disease=DOID:2531!1.46e-18!51;DOID:0060083!1.46e-18!51;DOID:1240!8.54e-16!39;DOID:8692!1.59e-12!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;5.55e-13;39!DOID:8692;8.05e-13;31!DOID:2531;3.68e-12;51!DOID:0060083;3.68e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.22e-20,51;DOID:0060083,9.22e-20,51;DOID:1240,8.48e-17,39;DOID:8692,2.68e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.56e-33!112;UBERON:0002390!3.71e-31!102;UBERON:0003061!3.71e-31!102;UBERON:0002405!1.16e-24!115;UBERON:0002371!2.44e-22!80;UBERON:0001474!1.37e-19!86;UBERON:0002384!1.64e-15!375;UBERON:0004765!2.94e-15!101;UBERON:0001434!2.94e-15!101;UBERON:0007023!4.26e-10!115;UBERON:0003081!4.47e-10!216 | |ontology_enrichment_uberon=UBERON:0002193!1.56e-33!112;UBERON:0002390!3.71e-31!102;UBERON:0003061!3.71e-31!102;UBERON:0002405!1.16e-24!115;UBERON:0002371!2.44e-22!80;UBERON:0001474!1.37e-19!86;UBERON:0002384!1.64e-15!375;UBERON:0004765!2.94e-15!101;UBERON:0001434!2.94e-15!101;UBERON:0007023!4.26e-10!115;UBERON:0003081!4.47e-10!216 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@GMFG | |short_description=p1@GMFG | ||
}} | }} |
Latest revision as of 22:09, 17 September 2015
Short description: | p1@GMFG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GMFG_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 6bp_to_ENST00000253054, NM_004877, uc002okx.3, uc002okz.3_5end |
EntrezGene: | GMFG |
HGNC: | 4374 |
UniProt: | O60234Q6IB37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.39e-37 | 108 |
hematopoietic system | 4.41e-35 | 98 |
blood island | 4.41e-35 | 98 |
immune system | 1.44e-31 | 93 |
bone marrow | 6.36e-26 | 76 |
bone element | 1.69e-21 | 82 |
skeletal element | 1.03e-16 | 90 |
skeletal system | 1.81e-15 | 100 |
connective tissue | 3.08e-15 | 371 |
lateral plate mesoderm | 1.19e-14 | 203 |
adult organism | 1.48e-10 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.22e-20 | 51 |
immune system cancer | 9.22e-20 | 51 |
leukemia | 8.48e-17 | 39 |
myeloid leukemia | 2.68e-13 | 31 |