FFCP PHASE1:Hg19::chr8:30242040..30242045,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11030 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19097 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000287771_5end | |||
|cluster_id=chr8:30242040..30242045,+ | |||
|description=CAGE_peak_2_at_RBPMS_5end | |||
|id=chr8:30242040..30242045,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.83e-19!180;CL:0000183!6.03e-13!59;CL:0000187!1.69e-11!54;CL:0000393!1.90e-11!60;CL:0000211!1.90e-11!60;CL:0000680!4.75e-11!57;CL:0000056!4.75e-11!57;CL:0000355!4.75e-11!57;CL:0000057!2.67e-10!75;CL:0002321!4.29e-10!248;CL:0000222!5.08e-10!119;CL:0000220!1.42e-09!246;CL:0000192!3.17e-09!42;CL:0000514!3.17e-09!42;CL:1000497!2.55e-08!18;CL:0002518!2.55e-08!18;CL:1000449!2.68e-08!16;CL:1000507!2.36e-07!12;CL:1000494!2.36e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.22e-08;15!CL:1000497;4.74e-08;17!CL:0002518;4.74e-08;17!CL:1000507;1.67e-07;10!CL:1000494;1.67e-07;10!CL:0000192;1.72e-07;43!CL:0000187;2.16e-07;55!CL:0000393;8.04e-07;61!CL:0000211;8.04e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,3.25e-12,55;CL:0000393,4.21e-12,61;CL:0000211,4.21e-12,61;CL:0000680,9.63e-12,58;CL:0000056,9.63e-12,58;CL:0000355,9.63e-12,58;CL:0000057,5.37e-11,76;CL:0000222,4.24e-10,121;CL:0000192,7.19e-10,43;CL:0000514,7.19e-10,43;CL:0002321,1.31e-09,250;CL:1000497,4.71e-08,17;CL:0002518,4.71e-08,17;CL:1000449,4.99e-08,15;CL:1000507,1.75e-07,10;CL:1000494,1.75e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.72e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.51e-27!216;UBERON:0005256!1.11e-26!143;UBERON:0003104!2.38e-22!238;UBERON:0009142!2.38e-22!238;UBERON:0000481!2.25e-21!347;UBERON:0000475!2.31e-20!365;UBERON:0003914!9.67e-17!118;UBERON:0009569!1.06e-14!113;UBERON:0000119!1.61e-14!312;UBERON:0000468!5.35e-14!659;UBERON:0000466!6.74e-14!126;UBERON:0000483!9.15e-14!309;UBERON:0003103!1.18e-13!69;UBERON:0002417!1.43e-13!61;UBERON:0000916!1.43e-13!61;UBERON:0000914!2.77e-13!83;UBERON:0002329!2.77e-13!83;UBERON:0003077!2.77e-13!83;UBERON:0003059!2.77e-13!83;UBERON:0007282!2.77e-13!83;UBERON:0009618!2.77e-13!83;UBERON:0007285!2.77e-13!83;UBERON:0000490!8.18e-13!138;UBERON:0001008!1.56e-12!45;UBERON:0004290!1.67e-12!70;UBERON:0005172!2.47e-12!55;UBERON:0005173!2.47e-12!55;UBERON:0003886!3.02e-12!63;UBERON:0000486!3.05e-12!82;UBERON:0006554!4.95e-12!44;UBERON:0002385!1.05e-11!63;UBERON:0001015!1.05e-11!63;UBERON:0000383!1.05e-11!63;UBERON:0005177!2.65e-11!107;UBERON:0001134!2.76e-11!61;UBERON:0002036!2.76e-11!61;UBERON:0003082!2.76e-11!61;UBERON:0002553!2.94e-11!70;UBERON:0001048!6.31e-11!168;UBERON:0000464!8.54e-11!104;UBERON:0003064!8.75e-11!37;UBERON:0002113!2.26e-10!27;UBERON:0003918!2.26e-10!27;UBERON:0005095!2.26e-10!27;UBERON:0007687!2.26e-10!27;UBERON:0004876!3.43e-10!20;UBERON:0000467!3.63e-10!625;UBERON:0000477!4.21e-10!286;UBERON:0000480!6.34e-10!626;UBERON:0000489!2.49e-09!32;UBERON:0000080!4.04e-09!18;UBERON:0002120!4.04e-09!18;UBERON:0004875!4.04e-09!18;UBERON:0005721!4.04e-09!18;UBERON:0005754!4.04e-09!18;UBERON:0007297!4.04e-09!18;UBERON:0000058!6.54e-09!26;UBERON:0006555!1.03e-08!17;UBERON:0005103!1.03e-08!17;UBERON:0000083!1.03e-08!17;UBERON:0009201!1.03e-08!17;UBERON:0004819!1.03e-08!17;UBERON:0006553!1.03e-08!17;UBERON:0003074!1.03e-08!17;UBERON:0003060!1.03e-08!17;UBERON:0004211!2.68e-08!16;UBERON:0001285!2.68e-08!16;UBERON:0007684!2.68e-08!16;UBERON:0003220!2.68e-08!16;UBERON:0004208!2.68e-08!16;UBERON:0003887!2.88e-08!21;UBERON:0004872!8.45e-08!84;UBERON:0004111!8.67e-08!241;UBERON:0000353!2.22e-07!17;UBERON:0009773!2.36e-07!12;UBERON:0001231!2.36e-07!12;UBERON:0004810!2.36e-07!12;UBERON:0000922!3.03e-07!612;UBERON:0002049!3.85e-07!79;UBERON:0007798!3.85e-07!79;UBERON:0003102!6.03e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.25e-09;30!UBERON:0001008;2.25e-09;30!UBERON:0002113;4.86e-09;24!UBERON:0011143;4.86e-09;24!UBERON:0006555;4.22e-08;15!UBERON:0004819;4.22e-08;15!UBERON:0001285;4.22e-08;15!UBERON:0007684;4.22e-08;15!UBERON:0005172;1.10e-07;52!UBERON:0005173;1.10e-07;52!UBERON:0000489;1.66e-07;29!UBERON:0004211;1.67e-07;10!UBERON:0009773;1.67e-07;10!UBERON:0001231;1.67e-07;10!UBERON:0004810;1.67e-07;10!UBERON:0002417;3.54e-07;58!UBERON:0000916;3.54e-07;58!UBERON:0003103;8.13e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.91e-30,160;UBERON:0009142,1.91e-30,160;UBERON:0002100,1.68e-26,199;UBERON:0005256,2.57e-22,122;UBERON:0003914,1.12e-16,117;UBERON:0007503,2.56e-15,78;UBERON:0000490,2.03e-14,148;UBERON:0009569,2.91e-14,112;UBERON:0002417,1.94e-13,60;UBERON:0000916,1.94e-13,60;UBERON:0002329,3.09e-13,71;UBERON:0003059,3.09e-13,71;UBERON:0007282,3.09e-13,71;UBERON:0004290,3.09e-13,71;UBERON:0009618,3.09e-13,71;UBERON:0003103,4.90e-13,68;UBERON:0000486,9.65e-13,83;UBERON:0003077,1.19e-12,72;UBERON:0007285,1.19e-12,72;UBERON:0007524,1.39e-12,73;UBERON:0002385,2.04e-12,64;UBERON:0001015,2.04e-12,64;UBERON:0000383,2.04e-12,64;UBERON:0005172,3.62e-12,54;UBERON:0005173,3.62e-12,54;UBERON:0001134,5.54e-12,62;UBERON:0002036,5.54e-12,62;UBERON:0003082,5.54e-12,62;UBERON:0001008,1.28e-11,48;UBERON:0000119,2.40e-11,309;UBERON:0006554,3.98e-11,47;UBERON:0005177,6.06e-11,101;UBERON:0000483,1.13e-10,306;UBERON:0001048,1.47e-10,160;UBERON:0002113,6.60e-10,26;UBERON:0003918,6.60e-10,26;UBERON:0011143,6.60e-10,26;UBERON:0005095,6.60e-10,26;UBERON:0007687,6.60e-10,26;UBERON:0003886,1.06e-08,54;UBERON:0006555,1.86e-08,16;UBERON:0004819,1.86e-08,16;UBERON:0000489,2.09e-08,31;UBERON:0004211,4.99e-08,15;UBERON:0009773,4.99e-08,15;UBERON:0001231,4.99e-08,15;UBERON:0001285,4.99e-08,15;UBERON:0007684,4.99e-08,15;UBERON:0004208,4.99e-08,15;UBERON:0002553,6.25e-08,61;UBERON:0004872,1.04e-07,83;UBERON:0004810,1.75e-07,10;UBERON:0002049,5.44e-07,78;UBERON:0007798,5.44e-07,78;UBERON:0007100,9.53e-07,27 | |||
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| |||
|short_description=p2@RBPMS | |||
}} |
Latest revision as of 23:14, 17 September 2015
Short description: | p2@RBPMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RBPMS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000287771_5end |
EntrezGene: | RBPMS |
HGNC: | 19097 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 3.25e-12 | 55 |
electrically responsive cell | 4.21e-12 | 61 |
electrically active cell | 4.21e-12 | 61 |
muscle precursor cell | 9.63e-12 | 58 |
myoblast | 9.63e-12 | 58 |
multi-potent skeletal muscle stem cell | 9.63e-12 | 58 |
fibroblast | 5.37e-11 | 76 |
mesodermal cell | 4.24e-10 | 121 |
smooth muscle cell | 7.19e-10 | 43 |
smooth muscle myoblast | 7.19e-10 | 43 |
embryonic cell | 1.31e-09 | 250 |
kidney cell | 4.71e-08 | 17 |
kidney epithelial cell | 4.71e-08 | 17 |
epithelial cell of nephron | 4.99e-08 | 15 |
kidney tubule cell | 1.75e-07 | 10 |
nephron tubule epithelial cell | 1.75e-07 | 10 |