FFCP PHASE1:Hg19::chr7:26240389..26240400,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:26240389..26240400,-
|short_description=p2@HNRNPA2B1
|description=CAGE_peak_2_at_HNRNPA2B1_5end
|association_with_transcript=3bp_to_ENST00000463181_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3181 | |EntrezGene=3181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5033 | |HGNC=5033 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000463181_5end | |||
|cluster_id=chr7:26240389..26240400,- | |||
|description=CAGE_peak_2_at_HNRNPA2B1_5end | |||
|id=chr7:26240389..26240400,- | |||
|ontology_enrichment_celltype=CL:0002319!7.15e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.15e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.15e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.10e-25!235;DOID:14566!3.44e-25!239;DOID:2531!8.86e-14!51;DOID:0060083!8.86e-14!51;DOID:0050686!3.04e-13!137;DOID:0050687!6.87e-13!143;DOID:1240!7.73e-11!39;DOID:305!9.35e-11!106;DOID:8692!4.19e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.11e-08;39!DOID:2531;1.43e-08;51!DOID:0060083;1.43e-08;51!DOID:8692;7.03e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.10e-25,235;DOID:14566,3.44e-25,239;DOID:2531,8.86e-14,51;DOID:0060083,8.86e-14,51;DOID:0050686,3.04e-13,137;DOID:0050687,6.87e-13,143;DOID:1240,7.73e-11,39;DOID:305,9.35e-11,106;DOID:8692,4.19e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.59e-16!94;UBERON:0001016!1.59e-16!94;UBERON:0005743!1.51e-14!86;UBERON:0001017!1.58e-14!82;UBERON:0001049!1.33e-11!57;UBERON:0005068!1.33e-11!57;UBERON:0006241!1.33e-11!57;UBERON:0007135!1.33e-11!57;UBERON:0000955!3.89e-11!69;UBERON:0006238!3.89e-11!69;UBERON:0000924!7.19e-11!173;UBERON:0006601!7.19e-11!173;UBERON:0004121!8.36e-11!169;UBERON:0003080!1.16e-10!42;UBERON:0002780!1.71e-10!41;UBERON:0001890!1.71e-10!41;UBERON:0006240!1.71e-10!41;UBERON:0007023!1.06e-09!115;UBERON:0003075!1.72e-09!86;UBERON:0007284!1.72e-09!86;UBERON:0002346!1.87e-09!90;UBERON:0002020!3.47e-09!34;UBERON:0003528!3.47e-09!34;UBERON:0002616!6.11e-09!59;UBERON:0000153!9.45e-09!129;UBERON:0007811!9.45e-09!129;UBERON:0001893!9.74e-09!34;UBERON:0002791!1.18e-08!33;UBERON:0000033!1.35e-08!123;UBERON:0003056!2.27e-08!61;UBERON:0001869!2.35e-08!32;UBERON:0000956!9.10e-07!25;UBERON:0000203!9.10e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.17e-08;34!UBERON:0002020;4.17e-08;34!UBERON:0002791;5.40e-08;32!UBERON:0002780;6.76e-08;41!UBERON:0001890;6.76e-08;41!UBERON:0001893;9.56e-08;34!UBERON:0001869;1.00e-07;32!UBERON:0000073;2.29e-07;53!UBERON:0002616;2.29e-07;53!UBERON:0000956;8.35e-07;25!UBERON:0000203;8.35e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.56e-16,89;UBERON:0001017,2.41e-14,81;UBERON:0001049,1.99e-11,56;UBERON:0005068,1.99e-11,56;UBERON:0006241,1.99e-11,56;UBERON:0007135,1.99e-11,56;UBERON:0000955,5.82e-11,68;UBERON:0006238,5.82e-11,68;UBERON:0000073,6.22e-11,53;UBERON:0002616,6.22e-11,53;UBERON:0011216,1.05e-10,223;UBERON:0002780,1.71e-10,41;UBERON:0001890,1.71e-10,41;UBERON:0003080,1.71e-10,41;UBERON:0006240,1.71e-10,41;UBERON:0004121,2.68e-10,171;UBERON:0000924,2.68e-10,171;UBERON:0006601,2.68e-10,171;UBERON:0003075,1.21e-09,82;UBERON:0007284,1.21e-09,82;UBERON:0002346,1.37e-09,86;UBERON:0007023,1.99e-09,114;UBERON:0003528,3.47e-09,34;UBERON:0002020,3.47e-09,34;UBERON:0001893,9.74e-09,34;UBERON:0002791,1.34e-08,32;UBERON:0001869,2.35e-08,32;UBERON:0003056,3.22e-08,61;UBERON:0000956,9.10e-07,25;UBERON:0000203,9.10e-07,25 | |||
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| ||
|short_description=p2@HNRNPA2B1 | |||
}} | }} |
Latest revision as of 23:20, 17 September 2015
Short description: | p2@HNRNPA2B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HNRNPA2B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000463181_5end |
EntrezGene: | HNRNPA2B1 |
HGNC: | 5033 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.15e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.56e-16 | 89 |
central nervous system | 2.41e-14 | 81 |
neural tube | 1.99e-11 | 56 |
neural rod | 1.99e-11 | 56 |
future spinal cord | 1.99e-11 | 56 |
neural keel | 1.99e-11 | 56 |
brain | 5.82e-11 | 68 |
future brain | 5.82e-11 | 68 |
regional part of nervous system | 6.22e-11 | 53 |
regional part of brain | 6.22e-11 | 53 |
organ system subdivision | 1.05e-10 | 223 |
regional part of forebrain | 1.71e-10 | 41 |
forebrain | 1.71e-10 | 41 |
anterior neural tube | 1.71e-10 | 41 |
future forebrain | 1.71e-10 | 41 |
ectoderm-derived structure | 2.68e-10 | 171 |
ectoderm | 2.68e-10 | 171 |
presumptive ectoderm | 2.68e-10 | 171 |
neural plate | 1.21e-09 | 82 |
presumptive neural plate | 1.21e-09 | 82 |
neurectoderm | 1.37e-09 | 86 |
adult organism | 1.99e-09 | 114 |
brain grey matter | 3.47e-09 | 34 |
gray matter | 3.47e-09 | 34 |
telencephalon | 9.74e-09 | 34 |
regional part of telencephalon | 1.34e-08 | 32 |
cerebral hemisphere | 2.35e-08 | 32 |
pre-chordal neural plate | 3.22e-08 | 61 |
cerebral cortex | 9.10e-07 | 25 |
pallium | 9.10e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.10e-25 | 235 |
disease of cellular proliferation | 3.44e-25 | 239 |
hematologic cancer | 8.86e-14 | 51 |
immune system cancer | 8.86e-14 | 51 |
organ system cancer | 3.04e-13 | 137 |
cell type cancer | 6.87e-13 | 143 |
leukemia | 7.73e-11 | 39 |
carcinoma | 9.35e-11 | 106 |
myeloid leukemia | 4.19e-08 | 31 |