FFCP PHASE1:Hg19::chr7:2687173..2687191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80727 | |EntrezGene=80727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22222 | |HGNC=22222 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=121bp_to_uc010ksn.2_5end | |association_with_transcript=121bp_to_uc010ksn.2_5end | ||
|cluster_id=chr7:2687173..2687191,+ | |||
|description=CAGE_peak_22_at_TTYH3_5end | |description=CAGE_peak_22_at_TTYH3_5end | ||
|id=chr7:2687173..2687191,+ | |id=chr7:2687173..2687191,+ | ||
|ontology_enrichment_celltype=CL:1000746;2.00e-13;7!CL:1000612;2.00e-13;7!CL:0002567;4.95e-12;3!CL:1000449;1.67e-11;15!CL:1000497;4.92e-10;17!CL:0002518;4.92e-10;17!CL:0000148;2.60e-09;10!CL:0000669;3.89e-09;4!CL:0000650;1.39e-08;2!CL:1000500;1.39e-08;2!CL:1000618;1.39e-08;2!CL:1001318;1.39e-08;2!CL:0002173;1.39e-08;2!CL:0002681;1.04e-07;12!CL:0002584;1.04e-07;12!CL:0002188;2.17e-07;5!CL:0000235;6.70e-07;6 | |ontology_enrichment_celltype=CL:0000548!1.48e-16!679;CL:0000004!1.48e-16!679;CL:0000255!1.48e-16!679;CL:0000012!5.37e-16!682;CL:0000144!1.89e-14!625;CL:0002371!3.16e-13!591;CL:0000003!1.47e-12!722;CL:0002321!1.91e-09!248;CL:0000220!2.02e-09!246;CL:0000133!3.33e-09!59;CL:0000221!4.59e-08!71;CL:0000055!3.76e-07!180;CL:0000333!9.78e-07!41 | ||
| | |ontology_enrichment_celltype_v019=CL:1000746;2.00e-13;7!CL:1000612;2.00e-13;7!CL:0002567;4.95e-12;3!CL:1000449;1.67e-11;15!CL:1000497;4.92e-10;17!CL:0002518;4.92e-10;17!CL:0000148;2.60e-09;10!CL:0000669;3.89e-09;4!CL:0000650;1.39e-08;2!CL:1000500;1.39e-08;2!CL:1000618;1.39e-08;2!CL:1001318;1.39e-08;2!CL:0002173;1.39e-08;2!CL:0002681;1.04e-07;12!CL:0002584;1.04e-07;12!CL:0002188;2.17e-07;5!CL:0000235;6.70e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:1000746,6.59e-13,7;CL:1000612,6.59e-13,7;CL:0002567,1.09e-12,3;CL:1000449,2.28e-11,15;CL:1000497,6.43e-10,17;CL:0002518,6.43e-10,17;CL:0000148,9.51e-10,10;CL:0000541,9.51e-10,10;CL:0000669,9.22e-09,4;CL:0000650,4.54e-08,2;CL:1000500,4.54e-08,2;CL:1000618,4.54e-08,2;CL:1001318,4.54e-08,2;CL:0002173,4.54e-08,2;CL:0002681,2.02e-07,12;CL:0002584,2.02e-07,12;CL:0002188,2.95e-07,5;CL:0000235,7.02e-07,6;CL:0000147,7.30e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000074;2.00e-13;7!UBERON:0001229;2.00e-13;7!UBERON:0006555;1.67e-11;15!UBERON:0004819;1.67e-11;15!UBERON:0001285;1.67e-11;15!UBERON:0007684;1.67e-11;15!UBERON:0003891;1.85e-09;4!UBERON:0000353;1.03e-08;15!UBERON:0003567;1.39e-08;2!UBERON:0003838;1.39e-08;2!UBERON:0003586;1.39e-08;2!UBERON:0005169;1.39e-08;2!UBERON:0002321;1.39e-08;2!UBERON:0005215;1.39e-08;2!UBERON:0002303;1.39e-08;2!UBERON:0002319;1.39e-08;2!UBERON:0001225;1.04e-07;12!UBERON:0008987;1.04e-07;12!UBERON:0006554;7.77e-07;30!UBERON:0001008;7.77e-07;30!UBERON:0002113;7.92e-07;24!UBERON:0011143;7.92e-07;24 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.00e-13;7!UBERON:0001229;2.00e-13;7!UBERON:0006555;1.67e-11;15!UBERON:0004819;1.67e-11;15!UBERON:0001285;1.67e-11;15!UBERON:0007684;1.67e-11;15!UBERON:0003891;1.85e-09;4!UBERON:0000353;1.03e-08;15!UBERON:0003567;1.39e-08;2!UBERON:0003838;1.39e-08;2!UBERON:0003586;1.39e-08;2!UBERON:0005169;1.39e-08;2!UBERON:0002321;1.39e-08;2!UBERON:0005215;1.39e-08;2!UBERON:0002303;1.39e-08;2!UBERON:0002319;1.39e-08;2!UBERON:0001225;1.04e-07;12!UBERON:0008987;1.04e-07;12!UBERON:0006554;7.77e-07;30!UBERON:0001008;7.77e-07;30!UBERON:0002113;7.92e-07;24!UBERON:0011143;7.92e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,6.59e-13,7;UBERON:0000074,6.59e-13,7;UBERON:0001229,6.59e-13,7;UBERON:0001230,6.59e-13,7;UBERON:0003220,6.59e-13,7;UBERON:0005749,6.59e-13,7;UBERON:0004199,6.59e-13,7;UBERON:0004209,6.59e-13,7;UBERON:0004198,6.59e-13,7;UBERON:0004211,2.28e-11,15;UBERON:0009773,2.28e-11,15;UBERON:0001231,2.28e-11,15;UBERON:0001285,2.28e-11,15;UBERON:0007684,2.28e-11,15;UBERON:0004208,2.28e-11,15;UBERON:0005103,2.90e-11,8;UBERON:0000083,2.90e-11,8;UBERON:0009201,2.90e-11,8;UBERON:0006553,2.90e-11,8;UBERON:0003074,2.90e-11,8;UBERON:0003060,2.90e-11,8;UBERON:0006555,1.34e-10,16;UBERON:0004819,1.34e-10,16;UBERON:0000080,5.52e-10,9;UBERON:0002120,5.52e-10,9;UBERON:0004875,5.52e-10,9;UBERON:0005721,5.52e-10,9;UBERON:0005754,5.52e-10,9;UBERON:0007297,5.52e-10,9;UBERON:0003891,5.00e-09,4;UBERON:0000353,1.86e-08,15;UBERON:0004876,4.04e-08,11;UBERON:0003567,4.54e-08,2;UBERON:0003838,4.54e-08,2;UBERON:0003586,4.54e-08,2;UBERON:0005169,4.54e-08,2;UBERON:0002321,4.54e-08,2;UBERON:0005215,4.54e-08,2;UBERON:0002303,4.54e-08,2;UBERON:0002319,4.54e-08,2;UBERON:0001225,2.02e-07,12;UBERON:0008987,2.02e-07,12;UBERON:0003887,2.02e-07,12 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,0,0,0.261185628199839,0,1.39560233594486,0.436882744260345,1.05506791291381,0,0.662794751455832,0.672325146451775,0,0,0.487932798790507,0.492484232307152,0.612002073732759,0.626909442956176,0.572471974262113,0.547497700291537,0.627713197974014,0.152826811495903,0.246301768349837,0.157421562627358,0,0.383829398097213,0,0,0,1.10926203050036,0,0,0,0,0.200544447470142,0,0.447830948479849,0.32389366601898,0.257575567634187,1.16318591023652,0.377875943688809,0,0.464858073811369,0,0.309706370895104,1.7261543539329,0.256160706529101,0.236482229888585,1.03423704220986,0,0,1.31769637679823,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.659702600373432,0.199463657621632,0.426224750532694,0.580418477257168,0.56738522469114,1.24564449799115,1.25624332628372,0.521482918420201,0.868755378820466,0.605399502633369,0,0.316462387440884,0.211255286311942,0.425208599930087,0,0,0.150176892841506,0,0,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.702678285545008,0.261958150995425,0,0.370784442784429,0,0,0.797747763113191,0,0,0,0,0,0.347140501607594,0,1.67799774483962,0.825354125820202,0.417989933073621,0,0,1.00416183829401,0,0.760272105718513,1.22031028774085,0,0.81014194788176,0.446498641420399,0,0,0,0.949265659568129,0.366403487860815,0,0,0,0,0.379891534993739,0.264818361626438,0.286836620748814,0,1.12135520028461,1.06748995729705,0.74000264525148,0.622422070799533,0.134710672069688,0,0.302714855289863,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0.491337269247072,0.103325781175765,0,0,0,2.15585442544872,0,0.250237039743928,0,0,0,0.150238058906597,0,0,0.427114777637135,0,0,0.206105058476878,0,0,0,0.194874010322397,0.252433774244115,0.184099797284599,0,0.355009592516614,0.10075209822764,0.169560592310488,0.57978255948989,0.272746120590835,0,0.365921118388786,0,0.232387885739037,0.310983165046111,0.504641701751257,0,1.56449532329816,2.57296375277154,0,0.928735856063958,0,0,0.168584690078102,0,0.110293972732394,0,0.474541238222193,0,0.196221465125346,0.38474715694639,0.738155454624648,2.80483547606892,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,2.07986957055916,0,0.34779121492523,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0.858486162094873,0.738651018262192,0.702012795417713,0.594524649154913,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0.492663237895943,0.264145302039678,0,0.432359860250884,0,1.77794104018073,1.90994212779139,1.17217447210047,1.71072446022705,0.925447434329912,0,1.14330573052231,0.336393253036082,0,0.36669142910475,0.258543431515556,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,1.3321108950805,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0.399891964728228,2.43247561282381,3.51579964002488,2.10833939483032,0,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0,0.215627574859517,0,0.254094624222463,0,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,0.36807447515742,1.50051156317903,0.813795071099207,0.415941723061614,0.713715955188647,0.473107245101804,0,0.300946099727719,0,0,0,0.368738337083406,0.173767228936166,1.17480694477644,0.686286847621712,0,0.215714200818617,0,0.303127571446259,0,1.20956117331872,0.248107807818777,0,0.280660094433074,0.128139149255701,0.511707249066704,0.482561763430822,0,0.308419387605311,0.710246901252508,0.0821271560138091,1.55776328755086,0.348631135379878,0.241718899183244,0.802025881213139,0,0,0,0.655622074797121,0,0.15403067420883,1.56869953835371,1.46139224653261,0.73886140225013,1.13733384070897,1.02056223165909,0.215915916102139,0,1.08378575017541,1.00337954770971,0.509752546090077,0,0.895499018888713,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0.580024309752732,0.308097234229289,0.307007349452259,0,0,0.290033387828457,0,0.267096106940212,0.165284915360978,0.384380134730212,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0.539617372749944,0.274537029736055,0.235624804691373,0,1.58510321173008,0.421258456238981,0,0.731140468893853,1.05650146756755,0.136499911407986,0.989838023675989,0,0,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,1.12678241012897,0.430234056612155,0.589494246078727,0,0.354761064070598,0,0.329294892959902,0,0.349934720244983,0,0,0,0,0,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0.199579371432817,0,0,0,0,0,0,2.50634477090067,1.01575066680962,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0.333926115068718,0.3296077484535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| ||
|short_description=p22@TTYH3 | |short_description=p22@TTYH3 | ||
}} | }} |
Latest revision as of 00:19, 18 September 2015
Short description: | p22@TTYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_TTYH3_5end |
Coexpression cluster: | NA |
Association with transcript: | 121bp_to_uc010ksn.2_5end |
EntrezGene: | TTYH3 |
HGNC: | 22222 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 6.59e-13 | 7 |
kidney corpuscule cell | 6.59e-13 | 7 |
light melanocyte | 1.09e-12 | 3 |
epithelial cell of nephron | 2.28e-11 | 15 |
kidney cell | 6.43e-10 | 17 |
kidney epithelial cell | 6.43e-10 | 17 |
melanocyte | 9.51e-10 | 10 |
melanoblast | 9.51e-10 | 10 |
pericyte cell | 9.22e-09 | 4 |
mesangial cell | 4.54e-08 | 2 |
kidney interstitial cell | 4.54e-08 | 2 |
juxtaglomerular complex cell | 4.54e-08 | 2 |
renal interstitial pericyte | 4.54e-08 | 2 |
extraglomerular mesangial cell | 4.54e-08 | 2 |
kidney cortical cell | 2.02e-07 | 12 |
renal cortical epithelial cell | 2.02e-07 | 12 |
glomerular endothelial cell | 2.95e-07 | 5 |
macrophage | 7.02e-07 | 6 |
pigment cell | 7.30e-07 | 14 |