FFCP PHASE1:Hg19::chr11:48002280..48002296,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5795 | |EntrezGene=5795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9673 | |HGNC=9673 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJ83,E9PPH3 | |UniProt=E9PJ83,E9PPH3 | ||
|association_with_transcript=1bp_to_ENST00000527952,ENST00000534219_5end | |association_with_transcript=1bp_to_ENST00000527952,ENST00000534219_5end | ||
|cluster_id=chr11:48002280..48002296,+ | |||
|description=CAGE_peak_3_at_PTPRJ_5end | |description=CAGE_peak_3_at_PTPRJ_5end | ||
|id=chr11:48002280..48002296,+ | |id=chr11:48002280..48002296,+ | ||
|ontology_enrichment_celltype=CL:0000791;6.81e-10;18!CL:0000789;6.81e-10;18!CL:0002419;6.81e-10;18 | |ontology_enrichment_celltype=CL:0000738!1.34e-13!140;CL:0002087!1.18e-10!119;CL:0000766!2.04e-09!76;CL:0002031!3.35e-09!124;CL:0002009!7.43e-08!65;CL:0000037!8.52e-08!172;CL:0000566!8.52e-08!172;CL:0000988!9.51e-08!182;CL:0000557!1.79e-07!71;CL:0000791!1.84e-07!18;CL:0000789!1.84e-07!18;CL:0002420!1.84e-07!18;CL:0002419!1.84e-07!18;CL:0000790!1.84e-07!18;CL:0002194!2.08e-07!63;CL:0000576!2.08e-07!63;CL:0000040!2.08e-07!63;CL:0000559!2.08e-07!63;CL:0002032!4.67e-07!165;CL:0000837!4.67e-07!165 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;6.81e-10;18!CL:0000789;6.81e-10;18!CL:0002419;6.81e-10;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.15e-12,136;CL:0000791,2.96e-10,18;CL:0000789,2.96e-10,18;CL:0002420,2.96e-10,18;CL:0002419,2.96e-10,18;CL:0000790,2.96e-10,18;CL:0002087,9.52e-10,115;CL:0002031,1.92e-08,120;CL:0000037,4.23e-08,168;CL:0000988,4.97e-08,177;CL:0000084,6.81e-07,25;CL:0000827,6.81e-07,25;CL:0002032,8.85e-07,161;CL:0000837,8.85e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;6.81e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0003528;2.32e-10;34!UBERON:0002020;2.32e-10;34!UBERON:0001893;3.18e-10;34!UBERON:0001869;5.88e-10;32!UBERON:0002780;7.57e-10;41!UBERON:0001890;7.57e-10;41!UBERON:0002791;8.24e-10;32!UBERON:0000956;9.66e-10;25!UBERON:0000203;9.66e-10;25!UBERON:0000073;1.08e-09;53!UBERON:0002616;1.08e-09;53!UBERON:0002619;5.97e-08;22!UBERON:0001950;7.04e-07;20 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!5.86e-12!59;UBERON:0000955!1.79e-11!69;UBERON:0006238!1.79e-11!69;UBERON:0001049!3.81e-11!57;UBERON:0005068!3.81e-11!57;UBERON:0006241!3.81e-11!57;UBERON:0007135!3.81e-11!57;UBERON:0002780!1.41e-10!41;UBERON:0001890!1.41e-10!41;UBERON:0006240!1.41e-10!41;UBERON:0003080!1.50e-10!42;UBERON:0003075!4.15e-10!86;UBERON:0007284!4.15e-10!86;UBERON:0002390!8.82e-10!102;UBERON:0003061!8.82e-10!102;UBERON:0002020!1.08e-09!34;UBERON:0003528!1.08e-09!34;UBERON:0001017!1.68e-09!82;UBERON:0001893!2.54e-09!34;UBERON:0003056!3.46e-09!61;UBERON:0002791!4.28e-09!33;UBERON:0005743!5.40e-09!86;UBERON:0001869!5.53e-09!32;UBERON:0002346!2.23e-08!90;UBERON:0002193!6.23e-08!112;UBERON:0000956!1.09e-07!25;UBERON:0000203!1.09e-07!25;UBERON:0000073!1.13e-07!94;UBERON:0001016!1.13e-07!94;UBERON:0007023!1.23e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.32e-10;34!UBERON:0002020;2.32e-10;34!UBERON:0001893;3.18e-10;34!UBERON:0001869;5.88e-10;32!UBERON:0002780;7.57e-10;41!UBERON:0001890;7.57e-10;41!UBERON:0002791;8.24e-10;32!UBERON:0000956;9.66e-10;25!UBERON:0000203;9.66e-10;25!UBERON:0000073;1.08e-09;53!UBERON:0002616;1.08e-09;53!UBERON:0002619;5.97e-08;22!UBERON:0001950;7.04e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.29e-15,53;UBERON:0002616,2.29e-15,53;UBERON:0003056,5.66e-14,61;UBERON:0001049,7.44e-14,56;UBERON:0005068,7.44e-14,56;UBERON:0006241,7.44e-14,56;UBERON:0007135,7.44e-14,56;UBERON:0003075,8.26e-14,82;UBERON:0007284,8.26e-14,82;UBERON:0000955,8.84e-13,68;UBERON:0006238,8.84e-13,68;UBERON:0002780,1.14e-12,41;UBERON:0001890,1.14e-12,41;UBERON:0003080,1.14e-12,41;UBERON:0006240,1.14e-12,41;UBERON:0002346,1.94e-12,86;UBERON:0003528,6.54e-12,34;UBERON:0002020,6.54e-12,34;UBERON:0001893,2.15e-11,34;UBERON:0001869,7.16e-11,32;UBERON:0002791,7.80e-11,32;UBERON:0010371,3.92e-10,104;UBERON:0000956,6.46e-10,25;UBERON:0000203,6.46e-10,25;UBERON:0001017,9.12e-10,81;UBERON:0010314,3.13e-09,132;UBERON:0001016,3.01e-08,89;UBERON:0002619,3.51e-08,22;UBERON:0002390,9.35e-08,98;UBERON:0003061,9.35e-08,98;UBERON:0006555,3.64e-07,16;UBERON:0004819,3.64e-07,16;UBERON:0001950,5.19e-07,20 | |||
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| ||
|short_description=p3@PTPRJ | |short_description=p3@PTPRJ | ||
}} | }} |
Latest revision as of 06:33, 18 September 2015
Short description: | p3@PTPRJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPRJ_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000527952, ENST00000534219_5end |
EntrezGene: | PTPRJ |
HGNC: | 9673 |
UniProt: | E9PJ83E9PPH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.15e-12 | 136 |
mature alpha-beta T cell | 2.96e-10 | 18 |
alpha-beta T cell | 2.96e-10 | 18 |
immature T cell | 2.96e-10 | 18 |
mature T cell | 2.96e-10 | 18 |
immature alpha-beta T cell | 2.96e-10 | 18 |
nongranular leukocyte | 9.52e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.92e-08 | 120 |
hematopoietic stem cell | 4.23e-08 | 168 |
hematopoietic cell | 4.97e-08 | 177 |
T cell | 6.81e-07 | 25 |
pro-T cell | 6.81e-07 | 25 |
hematopoietic oligopotent progenitor cell | 8.85e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.85e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.29e-15 | 53 |
regional part of brain | 2.29e-15 | 53 |
pre-chordal neural plate | 5.66e-14 | 61 |
neural tube | 7.44e-14 | 56 |
neural rod | 7.44e-14 | 56 |
future spinal cord | 7.44e-14 | 56 |
neural keel | 7.44e-14 | 56 |
neural plate | 8.26e-14 | 82 |
presumptive neural plate | 8.26e-14 | 82 |
brain | 8.84e-13 | 68 |
future brain | 8.84e-13 | 68 |
regional part of forebrain | 1.14e-12 | 41 |
forebrain | 1.14e-12 | 41 |
anterior neural tube | 1.14e-12 | 41 |
future forebrain | 1.14e-12 | 41 |
neurectoderm | 1.94e-12 | 86 |
brain grey matter | 6.54e-12 | 34 |
gray matter | 6.54e-12 | 34 |
telencephalon | 2.15e-11 | 34 |
cerebral hemisphere | 7.16e-11 | 32 |
regional part of telencephalon | 7.80e-11 | 32 |
ecto-epithelium | 3.92e-10 | 104 |
cerebral cortex | 6.46e-10 | 25 |
pallium | 6.46e-10 | 25 |
central nervous system | 9.12e-10 | 81 |
structure with developmental contribution from neural crest | 3.13e-09 | 132 |
nervous system | 3.01e-08 | 89 |
regional part of cerebral cortex | 3.51e-08 | 22 |
hematopoietic system | 9.35e-08 | 98 |
blood island | 9.35e-08 | 98 |
excretory tube | 3.64e-07 | 16 |
kidney epithelium | 3.64e-07 | 16 |
neocortex | 5.19e-07 | 20 |