FFCP PHASE1:Hg19::chr10:45869652..45869680,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=240 | |EntrezGene=240 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=435 | |HGNC=435 | ||
|TSSclassifier=strong | |||
|UniProt=P09917,B7ZLS0 | |UniProt=P09917,B7ZLS0 | ||
|association_with_transcript=0bp_to_ENST00000374391,ENST00000542434_5end | |association_with_transcript=0bp_to_ENST00000374391,ENST00000542434_5end | ||
|cluster_id=chr10:45869652..45869680,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_1_at_ALOX5_5end | |description=CAGE_peak_1_at_ALOX5_5end | ||
|id=chr10:45869652..45869680,+ | |id=chr10:45869652..45869680,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.76e-46!140;CL:0000037!1.65e-41!172;CL:0000566!1.65e-41!172;CL:0002032!2.47e-40!165;CL:0000837!2.47e-40!165;CL:0000766!1.97e-39!76;CL:0002031!2.05e-37!124;CL:0000988!1.69e-36!182;CL:0000557!3.30e-35!71;CL:0000763!4.24e-35!112;CL:0000049!4.24e-35!112;CL:0002087!3.21e-34!119;CL:0000839!3.57e-34!70;CL:0002009!1.06e-31!65;CL:0002194!3.37e-30!63;CL:0000576!3.37e-30!63;CL:0000040!3.37e-30!63;CL:0000559!3.37e-30!63;CL:0002057!1.17e-29!42;CL:0000860!9.72e-29!45;CL:0000945!6.46e-09!24;CL:0000826!6.46e-09!24;CL:0000236!7.70e-09!14;CL:0000094!5.70e-07!8;CL:0002393!6.63e-07!9;CL:0002397!6.63e-07!9 | |ontology_enrichment_celltype=CL:0000738!2.76e-46!140;CL:0000037!1.65e-41!172;CL:0000566!1.65e-41!172;CL:0002032!2.47e-40!165;CL:0000837!2.47e-40!165;CL:0000766!1.97e-39!76;CL:0002031!2.05e-37!124;CL:0000988!1.69e-36!182;CL:0000557!3.30e-35!71;CL:0000763!4.24e-35!112;CL:0000049!4.24e-35!112;CL:0002087!3.21e-34!119;CL:0000839!3.57e-34!70;CL:0002009!1.06e-31!65;CL:0002194!3.37e-30!63;CL:0000576!3.37e-30!63;CL:0000040!3.37e-30!63;CL:0000559!3.37e-30!63;CL:0002057!1.17e-29!42;CL:0000860!9.72e-29!45;CL:0000945!6.46e-09!24;CL:0000826!6.46e-09!24;CL:0000236!7.70e-09!14;CL:0000094!5.70e-07!8;CL:0002393!6.63e-07!9;CL:0002397!6.63e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.47e-25;33!CL:0002057;4.47e-25;33!CL:0000473;9.39e-24;39!CL:0000234;9.39e-24;39!CL:0000576;3.91e-23;48!CL:0000766;4.91e-21;69!CL:0002087;1.78e-11;104!CL:0000738;2.16e-11;136!CL:0000763;1.33e-10;100!CL:0000945;3.10e-10;24!CL:0000236;7.83e-10;13!CL:0000094;8.91e-08;8!CL:0000988;6.19e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.56e-49,136;CL:0000766,8.63e-46,72;CL:0000037,2.95e-41,168;CL:0000557,7.00e-41,67;CL:0002032,1.13e-39,161;CL:0000837,1.13e-39,161;CL:0000839,1.13e-39,66;CL:0002031,7.17e-39,120;CL:0000763,3.71e-37,108;CL:0000049,3.71e-37,108;CL:0000473,4.56e-37,48;CL:0000234,4.56e-37,48;CL:0002009,7.62e-37,61;CL:0000988,1.60e-36,177;CL:0002087,2.67e-35,115;CL:0002194,4.24e-35,59;CL:0000576,4.24e-35,59;CL:0000040,4.24e-35,59;CL:0000559,4.24e-35,59;CL:0000860,7.76e-34,42;CL:0002057,7.76e-34,42;CL:0000945,2.75e-10,24;CL:0000826,2.75e-10,24;CL:0000236,6.43e-10,14;CL:0000094,8.94e-08,8;CL:0002393,1.06e-07,9;CL:0002397,1.06e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.29e-24;42!CL:0000049;2.05e-10;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-35!115;UBERON:0002390!5.14e-33!102;UBERON:0003061!5.14e-33!102;UBERON:0002193!2.38e-28!112;UBERON:0002371!5.52e-28!80;UBERON:0001474!5.44e-24!86;UBERON:0004765!1.33e-18!101;UBERON:0001434!1.33e-18!101;UBERON:0002405!2.40e-17!115;UBERON:0001049!1.18e-11!57;UBERON:0005068!1.18e-11!57;UBERON:0006241!1.18e-11!57;UBERON:0007135!1.18e-11!57;UBERON:0003080!7.23e-09!42;UBERON:0003075!7.87e-09!86;UBERON:0007284!7.87e-09!86;UBERON:0002780!1.37e-08!41;UBERON:0001890!1.37e-08!41;UBERON:0006240!1.37e-08!41;UBERON:0002616!1.88e-08!59;UBERON:0005743!4.21e-08!86;UBERON:0001017!7.59e-08!82;UBERON:0002346!1.49e-07!90;UBERON:0000955!1.75e-07!69;UBERON:0006238!1.75e-07!69;UBERON:0002020!4.21e-07!34;UBERON:0003528!4.21e-07!34;UBERON:0001893!5.65e-07!34;UBERON:0002791!7.93e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!1.38e-35!115;UBERON:0002390!5.14e-33!102;UBERON:0003061!5.14e-33!102;UBERON:0002193!2.38e-28!112;UBERON:0002371!5.52e-28!80;UBERON:0001474!5.44e-24!86;UBERON:0004765!1.33e-18!101;UBERON:0001434!1.33e-18!101;UBERON:0002405!2.40e-17!115;UBERON:0001049!1.18e-11!57;UBERON:0005068!1.18e-11!57;UBERON:0006241!1.18e-11!57;UBERON:0007135!1.18e-11!57;UBERON:0003080!7.23e-09!42;UBERON:0003075!7.87e-09!86;UBERON:0007284!7.87e-09!86;UBERON:0002780!1.37e-08!41;UBERON:0001890!1.37e-08!41;UBERON:0006240!1.37e-08!41;UBERON:0002616!1.88e-08!59;UBERON:0005743!4.21e-08!86;UBERON:0001017!7.59e-08!82;UBERON:0002346!1.49e-07!90;UBERON:0000955!1.75e-07!69;UBERON:0006238!1.75e-07!69;UBERON:0002020!4.21e-07!34;UBERON:0003528!4.21e-07!34;UBERON:0001893!5.65e-07!34;UBERON:0002791!7.93e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.33e-10;114!UBERON:0000178;4.45e-07;15!UBERON:0000179;4.45e-07;15!UBERON:0000463;4.45e-07;15 | |||
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| ||
|short_description=p1@ALOX5 | |short_description=p1@ALOX5 | ||
}} | }} |
Latest revision as of 07:20, 18 September 2015
Short description: | p1@ALOX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALOX5_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000374391, ENST00000542434_5end |
EntrezGene: | ALOX5 |
HGNC: | 435 |
UniProt: | P09917B7ZLS0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.56e-49 | 136 |
myeloid leukocyte | 8.63e-46 | 72 |
hematopoietic stem cell | 2.95e-41 | 168 |
granulocyte monocyte progenitor cell | 7.00e-41 | 67 |
hematopoietic oligopotent progenitor cell | 1.13e-39 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-39 | 161 |
myeloid lineage restricted progenitor cell | 1.13e-39 | 66 |
hematopoietic lineage restricted progenitor cell | 7.17e-39 | 120 |
myeloid cell | 3.71e-37 | 108 |
common myeloid progenitor | 3.71e-37 | 108 |
defensive cell | 4.56e-37 | 48 |
phagocyte | 4.56e-37 | 48 |
macrophage dendritic cell progenitor | 7.62e-37 | 61 |
hematopoietic cell | 1.60e-36 | 177 |
nongranular leukocyte | 2.67e-35 | 115 |
monopoietic cell | 4.24e-35 | 59 |
monocyte | 4.24e-35 | 59 |
monoblast | 4.24e-35 | 59 |
promonocyte | 4.24e-35 | 59 |
classical monocyte | 7.76e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.76e-34 | 42 |
lymphocyte of B lineage | 2.75e-10 | 24 |
pro-B cell | 2.75e-10 | 24 |
B cell | 6.43e-10 | 14 |
granulocyte | 8.94e-08 | 8 |
intermediate monocyte | 1.06e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.29e-40 | 114 |
hematopoietic system | 4.14e-39 | 98 |
blood island | 4.14e-39 | 98 |
hemolymphoid system | 1.68e-34 | 108 |
bone marrow | 2.17e-33 | 76 |
bone element | 9.91e-29 | 82 |
immune system | 3.43e-28 | 93 |
skeletal element | 2.64e-24 | 90 |
skeletal system | 9.80e-20 | 100 |
neural tube | 1.07e-10 | 56 |
neural rod | 1.07e-10 | 56 |
future spinal cord | 1.07e-10 | 56 |
neural keel | 1.07e-10 | 56 |
regional part of nervous system | 9.25e-10 | 53 |
regional part of brain | 9.25e-10 | 53 |
lateral plate mesoderm | 3.15e-09 | 203 |
regional part of forebrain | 1.01e-07 | 41 |
forebrain | 1.01e-07 | 41 |
anterior neural tube | 1.01e-07 | 41 |
future forebrain | 1.01e-07 | 41 |
blood | 4.42e-07 | 15 |
haemolymphatic fluid | 4.42e-07 | 15 |
organism substance | 4.42e-07 | 15 |