FFCP PHASE1:Hg19::chr5:64859227..64859241,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23398 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28954 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=96bp_to_uc011cqv.1,uc011cqw.1_5end | |||
|cluster_id=chr5:64859227..64859241,+ | |||
|coexpression_cluster_id=C4512 | |||
|description=CAGE_peak_2_at_PPWD1_5end | |||
|id=chr5:64859227..64859241,+ | |||
|ontology_enrichment_celltype=CL:0000738!6.20e-40!140;CL:0000037!3.39e-35!172;CL:0000566!3.39e-35!172;CL:0000988!2.25e-33!182;CL:0002087!4.22e-32!119;CL:0002032!7.03e-32!165;CL:0000837!7.03e-32!165;CL:0002031!4.32e-31!124;CL:0000860!1.82e-20!45;CL:0002057!4.89e-20!42;CL:0000766!6.20e-19!76;CL:0002009!3.42e-16!65;CL:0000763!3.72e-16!112;CL:0000049!3.72e-16!112;CL:0000557!1.01e-15!71;CL:0000542!1.41e-15!53;CL:0000051!1.41e-15!53;CL:0000838!4.29e-15!52;CL:0002194!4.70e-15!63;CL:0000576!4.70e-15!63;CL:0000040!4.70e-15!63;CL:0000559!4.70e-15!63;CL:0000839!9.62e-15!70;CL:0000791!2.83e-11!18;CL:0000789!2.83e-11!18;CL:0002420!2.83e-11!18;CL:0002419!2.83e-11!18;CL:0000790!2.83e-11!18;CL:0000084!8.46e-10!25;CL:0000827!8.46e-10!25;CL:0000134!1.37e-07!358;CL:0000219!2.11e-07!390;CL:0000625!2.60e-07!11;CL:0000236!4.19e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-22;33!CL:0002057;1.02e-22;33!CL:0000576;9.88e-17;48!CL:0000791;9.68e-16;18!CL:0000789;9.68e-16;18!CL:0002419;9.68e-16;18!CL:0002087;7.47e-15;104!CL:0000473;7.94e-15;39!CL:0000234;7.94e-15;39!CL:0000084;6.51e-14;25!CL:0000542;2.56e-12;53!CL:0000766;3.32e-12;69!CL:0000738;2.25e-11;136!CL:0000625;7.67e-10;11!CL:0000988;2.06e-09;177!CL:0000236;1.51e-08;13!CL:0000624;2.20e-07;6!CL:0000094;5.71e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.23e-55,136;CL:0000037,1.16e-45,168;CL:0000988,1.15e-44,177;CL:0002087,3.78e-44,115;CL:0002031,8.92e-42,120;CL:0002032,6.36e-41,161;CL:0000837,6.36e-41,161;CL:0000860,6.23e-28,42;CL:0002057,6.23e-28,42;CL:0000766,9.06e-26,72;CL:0000473,1.12e-23,48;CL:0000234,1.12e-23,48;CL:0002009,2.70e-22,61;CL:0000557,1.56e-21,67;CL:0000542,9.68e-21,53;CL:0000051,9.68e-21,53;CL:0002194,1.34e-20,59;CL:0000576,1.34e-20,59;CL:0000040,1.34e-20,59;CL:0000559,1.34e-20,59;CL:0000838,4.91e-20,52;CL:0000763,9.67e-20,108;CL:0000049,9.67e-20,108;CL:0000839,2.49e-19,66;CL:0000791,5.29e-16,18;CL:0000789,5.29e-16,18;CL:0002420,5.29e-16,18;CL:0002419,5.29e-16,18;CL:0000790,5.29e-16,18;CL:0000084,4.37e-14,25;CL:0000827,4.37e-14,25;CL:0000134,3.01e-12,354;CL:0002320,2.86e-11,361;CL:0000219,4.38e-11,386;CL:0000625,4.06e-10,11;CL:0000236,5.05e-09,14;CL:0000034,1.59e-08,441;CL:0000048,8.83e-08,427;CL:0000624,2.00e-07,6;CL:0000723,3.48e-07,433;CL:0000094,3.69e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.18e-20;42!CL:0000790;9.68e-16;18!CL:0000051;2.56e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.24e-21!112;UBERON:0002390!3.43e-20!102;UBERON:0003061!3.43e-20!102;UBERON:0001474!1.78e-13!86;UBERON:0002371!3.59e-13!80;UBERON:0002405!1.98e-11!115;UBERON:0004765!4.83e-10!101;UBERON:0001434!4.83e-10!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.79e-09;15!UBERON:0000179;2.79e-09;15!UBERON:0000463;2.79e-09;15!UBERON:0002390;8.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.09e-30,98;UBERON:0003061,2.09e-30,98;UBERON:0002193,1.21e-29,108;UBERON:0002405,4.90e-22,93;UBERON:0001474,9.13e-20,82;UBERON:0002371,2.67e-19,76;UBERON:0004765,1.65e-17,90;UBERON:0001434,1.18e-14,100;UBERON:0002384,1.09e-11,371;UBERON:0000178,4.01e-09,15;UBERON:0000179,4.01e-09,15;UBERON:0000463,4.01e-09,15;UBERON:0003081,2.78e-07,203 | |||
|phase1_expression=0.54503513781167,0.428201047781966,1.12763523276777,0,0,0,0,0,0,0,0.697801167972428,0,0.527533956456907,0.123766352960047,0.331397375727916,0,1.80808358407193,0.730310090387373,0.487932798790507,0.246242116153576,0,0,0.286235987131057,0.547497700291537,0.125542639594803,0.229240217243854,0.656804715599566,0.472264687882075,3.54027849164014,4.22212337906934,2.32224184974114,0,0,0,4.26069603191659,0.710846162437108,4.11040615068786,1.66198622559563,1.20326668482085,2.82114131930607,1.56740831967947,0.971680998056939,1.54545340580512,5.08893835728477,6.04601509902095,7.03493777444667,3.95129362739664,4.93401465626191,9.60089749774821,1.7261543539329,5.12321413058201,5.20260905754887,1.72372840368309,6.45484683583826,4.06279459783025,3.20011977222428,8.46009065179322,6.29225756446237,5.81559395504715,8.98601275813062,6.39337125799041,0.989553900560148,4.78712778291916,8.52449501065388,3.77272010217159,3.40431134814684,3.73693349397345,2.26123798731069,2.08593167368081,5.42972111762792,3.02699751316684,5.52416453981347,6.0127853613768,2.5350634357433,3.18906449947565,1.25795187305026,2.02191536063691,2.25265339262259,2.25015821375912,3.13514018115373,1.19350006319454,2.00930569141097,5.27988733383968,3.27683166757279,7.11607403090844,4.26730222566507,2.80277190925209,4.02326707968138,3.30522436392431,1.90810750907073,4.55370375287559,4.11066032559657,0.764546456250458,5.28685314316103,5.04457706683382,2.63384084775077,9.63877873557782,9.43225830597995,5.75684197198626,3.17654341242288,7.82213439920617,5.6813736688168,5.84480185223734,6.01616467179937,12.0788422064683,5.75988125917415,15.1650163708409,1.79327847615945,2.47112760363769,0.986627427622057,2.21080014228679,5.79606171470105,7.71090128442714,7.22360235842225,9.40819714244791,5.21222976408804,7.2811893784365,7.21617635513523,13.4100436770337,3.82278497188916,3.25541726928209,3.8018081777935,6.02300476311091,6.52731716887534,3.74792179657038,4.97232229292435,1.64225599384209,10.0803371612366,7.48832548193821,7.09639579025715,0,1.34140171940727,0.12786256184353,0,0,0.144846518960824,2.3858578411533,0.973269740605272,0,0.886917589850256,0.263504357079378,0.261958150995425,0,0,0.324547393654683,1.21890816109487,0.797747763113191,4.76981248610684,5.14795419702115,4.08603251462521,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0.208994966536811,0.775250277507987,1.06729878806013,2.34304428935269,0.805658634218294,0,0.976248230192678,1.83831540172934,1.62028389576352,2.67899184852239,2.69435247151404,0.900891843866578,0,0.949265659568129,0.732806975721629,5.27121669744253,7.75560528296651,0,0,0.633152558322899,1.32409180813219,1.14734648299525,0.709336764396714,0,0,0.24666754841716,0.933633106199299,0.808264032418128,0.817309515567294,0.302714855289863,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0.352303495931295,0.323745888736263,0.140450806702248,0,0,0.206651562351531,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0.794025282120147,0.358779271377724,0.213557388818567,0,1.20036438433761,0.412210116953756,0.772921620136887,0.558350568994769,0.675105328965065,0.292311015483596,1.00973509697646,0.0920498986422993,0.161646056818812,1.42003837006646,0.906768884048762,0.169560592310488,0.57978255948989,0.272746120590835,0.286804595389004,0.975789649036763,2.78312513475119,2.32387885739037,1.86589899027667,0.756962552626885,1.09493207722749,0,0,0,0.464367928031979,0,0.473227200159376,0.842923450390509,0.241011029883482,0.441175890929576,0.217879444092406,0.474541238222193,0.539325232640658,0.392442930250692,0,0,0,0,0,0,0,0,1.7658523976586,2.09080345523293,0.514703430895577,0.109750285408626,0,0,0.277765335475589,0,0,0,0.579652024875384,0.117408694235822,1.29929802984966,1.38895653772983,2.47330397904978,0,1.71697232418975,0,0.234004265139238,0.743155811443641,0.93733833986777,1.00789276919316,1.13420077793909,0.268675568108545,1.16253575405585,0.383382679165211,4.43396914106349,1.14462964217194,1.03664057770386,0.432359860250884,0.50496973370552,0.253991577168676,0,0,0,0,0.300343057843917,0.571652865261156,0.448524337381443,0,0.5867062865676,0.775630294546667,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,1.20575750823834,0.871533458600294,0.499864955910285,0,0,2.10833939483032,0.958499421966331,0,0,0.868687840005475,0.205476322550383,0.537182889719687,1.2329365839288,7.29013812747131,4.52817907204986,4.74869234235069,1.52456774533478,1.30139853857622,0.773288812777695,0,0,3.74503511973591,2.99161459204025,2.90090859405225,0,0,0,1.03985430765404,0.535286966391485,0,0.117141414992713,0,0,1.03473071292505,1.32845119707087,0,0.434418072340414,0,0.343143423810856,7.03011288817817,2.5885704098234,2.13455115606889,0.303127571446259,0,0.30239029332968,0.248107807818777,1.53461973288062,0.561320188866147,1.15325234330131,0.511707249066704,1.44768529029247,0,0.616838775210622,0.177561725313127,0.41063578006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| |||
|short_description=p2@PPWD1 | |||
}} |
Latest revision as of 10:18, 18 September 2015
Short description: | p2@PPWD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPWD1_5end |
Coexpression cluster: | C4512_CD4_Neutrophils_CD14_plasma_CD8_Peripheral_Eosinophils |
Association with transcript: | 96bp_to_uc011cqv.1, uc011cqw.1_5end |
EntrezGene: | PPWD1 |
HGNC: | 28954 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.09e-30 | 98 |
blood island | 2.09e-30 | 98 |
hemolymphoid system | 1.21e-29 | 108 |
immune system | 4.90e-22 | 93 |
bone element | 9.13e-20 | 82 |
bone marrow | 2.67e-19 | 76 |
skeletal element | 1.65e-17 | 90 |
skeletal system | 1.18e-14 | 100 |
connective tissue | 1.09e-11 | 371 |
blood | 4.01e-09 | 15 |
haemolymphatic fluid | 4.01e-09 | 15 |
organism substance | 4.01e-09 | 15 |
lateral plate mesoderm | 2.78e-07 | 203 |