FFCP PHASE1:Hg19::chr14:101034622..101034645,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57596 | |EntrezGene=57596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24163 | |HGNC=24163 | ||
|TSSclassifier=strong | |||
|UniProt=G3V2K4,Q9BUH8 | |UniProt=G3V2K4,Q9BUH8 | ||
|association_with_transcript=-215bp_to_ENST00000443071,ENST00000557378,NM_001159531,uc010txa.1_5end | |association_with_transcript=-215bp_to_ENST00000443071,ENST00000557378,NM_001159531,uc010txa.1_5end | ||
|cluster_id=chr14:101034622..101034645,- | |||
|description=CAGE_peak_5_at_BEGAIN_5end | |description=CAGE_peak_5_at_BEGAIN_5end | ||
|id=chr14:101034622..101034645,- | |id=chr14:101034622..101034645,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;4.54e-12;5!CL:0000163;6.75e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,5.17e-12,5;CL:0002028,5.17e-12,5;CL:0000163,7.24e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.93e-24;29!UBERON:0006215;8.08e-19;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.62e-10,106;DOID:0050687,9.66e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.36e-23!57;UBERON:0005068!1.36e-23!57;UBERON:0006241!1.36e-23!57;UBERON:0007135!1.36e-23!57;UBERON:0002616!4.48e-21!59;UBERON:0007023!4.47e-19!115;UBERON:0003075!8.80e-19!86;UBERON:0007284!8.80e-19!86;UBERON:0000955!1.23e-18!69;UBERON:0006238!1.23e-18!69;UBERON:0002346!2.25e-17!90;UBERON:0001017!7.64e-17!82;UBERON:0005743!1.19e-16!86;UBERON:0000073!4.66e-16!94;UBERON:0001016!4.66e-16!94;UBERON:0001737!4.31e-15!9;UBERON:0002780!1.00e-14!41;UBERON:0001890!1.00e-14!41;UBERON:0006240!1.00e-14!41;UBERON:0003080!3.31e-14!42;UBERON:0004733!9.68e-13!12;UBERON:0002028!9.68e-13!12;UBERON:0007277!9.68e-13!12;UBERON:0002680!3.25e-12!9;UBERON:0001895!3.25e-12!9;UBERON:0010092!3.25e-12!9;UBERON:0004732!1.56e-11!13;UBERON:0003076!2.38e-11!15;UBERON:0003057!2.38e-11!15;UBERON:0001893!6.28e-11!34;UBERON:0000033!7.37e-11!123;UBERON:0002020!9.59e-11!34;UBERON:0003528!9.59e-11!34;UBERON:0000153!2.12e-10!129;UBERON:0007811!2.12e-10!129;UBERON:0003056!2.69e-10!61;UBERON:0002791!5.01e-10!33;UBERON:0001557!7.82e-10!19;UBERON:0001869!1.64e-09!32;UBERON:0002037!5.10e-09!6;UBERON:0006215!5.10e-09!6;UBERON:0004121!4.50e-08!169;UBERON:0000064!8.56e-08!219;UBERON:0000924!1.31e-07!173;UBERON:0006601!1.31e-07!173;UBERON:0002619!1.91e-07!22;UBERON:0000956!3.26e-07!25;UBERON:0000203!3.26e-07!25;UBERON:0001950!4.45e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.82e-54;9!UBERON:0001557;2.82e-54;9!UBERON:0000072;1.51e-16;37!UBERON:0000065;3.99e-14;44!UBERON:0000007;5.52e-13;2!UBERON:0002680;6.74e-11;9!UBERON:0001895;6.74e-11;9!UBERON:0002037;1.12e-09;6!UBERON:0005383;9.27e-09;3!UBERON:0005382;9.27e-09;3!UBERON:0004733;3.34e-08;12!UBERON:0002028;3.34e-08;12!UBERON:0004732;1.40e-07;13!UBERON:0001874;3.50e-07;1!UBERON:0003296;6.45e-07;4!UBERON:0010133;6.45e-07;4!UBERON:0000369;8.95e-07;4!UBERON:0002435;8.95e-07;4!UBERON:0000204;8.95e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.90e-54,9;UBERON:0001557,4.81e-25,19;UBERON:0008947,9.90e-18,38;UBERON:0003258,9.90e-18,38;UBERON:0000072,6.11e-14,47;UBERON:0000007,5.20e-13,2;UBERON:0000065,7.22e-12,54;UBERON:0002680,6.40e-11,9;UBERON:0001895,6.40e-11,9;UBERON:0010092,6.40e-11,9;UBERON:0002037,8.98e-10,6;UBERON:0006215,8.98e-10,6;UBERON:0005383,1.09e-08,3;UBERON:0005382,1.09e-08,3;UBERON:0011216,2.06e-08,223;UBERON:0004733,3.21e-08,12;UBERON:0002028,3.21e-08,12;UBERON:0007277,3.21e-08,12;UBERON:0001004,4.09e-08,74;UBERON:0004732,1.35e-07,13;UBERON:0000073,1.83e-07,53;UBERON:0002616,1.83e-07,53;UBERON:0001874,3.40e-07,1;UBERON:0001049,5.35e-07,56;UBERON:0005068,5.35e-07,56;UBERON:0006241,5.35e-07,56;UBERON:0007135,5.35e-07,56;UBERON:0003296,6.26e-07,4;UBERON:0010133,6.26e-07,4;UBERON:0000955,9.29e-07,68;UBERON:0006238,9.29e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.15877215168659,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,2.83936320095625,2.86593973132773,2.6511213287183,3.52940712743661,2.39667388501647,3.08451804844426,3.23595139584395,2.5508790466295,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10992173311158,3.45887888200707,3.02981840223312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0.671028323677248,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0.211125408127993,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0,1.65471377237555,0,0,0.347249989866585,0,1.08536794762867,1.52581736317083,1.99042667876204,4.72876190325676,0.219385397153973,3.81284622316466,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,0.208843899010911,0.269604531922708,0,0.702793337176017,0,0,0.971121518136371,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,4.06376591414158,2.41194746384412,3.20250282507516,0.290967049465258,0,0,0,0,0.379864775735272,0.782205530939212,0,0,0.999048047910651,0,0,0,0,0.248505071130865,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0,0.104909176269996,0,6.09576953731672,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0,0.250381861413,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.782982875895635,0,0,0,0.358177682162975,2.77921302444875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0.139879507719444,0,0,0.646948868380091,0,1.09209638192014,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.478901577171454,0.41023272848151,0,0.484100767249525,0.645902582527404,0,0,0.11796972334774,0,0.231051332300676,0,0,0,0.902523940191087,0,2.34454203369928,0,0,0,0.675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0.535701835878287,0,2.42786241694653,1.59363533945908,0,0,0,1.01954599465248,0.197318320688547,0,0.111231401892069,0.078493092850514,1.25692471932802,0,0,0,0,0.714765441766563,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,1.08786384305464,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0,0,0.124149428591716,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0,0,0,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,1.15877215168659,0,0,0,0,0,0.261958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,2.83936320095625,2.86593973132773,2.6511213287183,3.52940712743661,2.39667388501647,3.08451804844426,3.23595139584395,2.5508790466295,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10992173311158,3.45887888200707,3.02981840223312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0.671028323677248,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703347082052564,0,0,0.211125408127993,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,1.93866549219044,0.371072392647405,0,0,0,0,0,0,1.65471377237555,0,0,0.347249989866585,0,1.08536794762867,1.52581736317083,1.99042667876204,4.72876190325676,0.219385397153973,3.81284622316466,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.370691816839509,0.208843899010911,0.269604531922708,0,0.702793337176017,0,0,0.971121518136371,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0.51595809741485,4.06376591414158,2.41194746384412,3.20250282507516,0.290967049465258,0,0,0,0,0.379864775735272,0.782205530939212,0,0,0.999048047910651,0,0,0,0,0.248505071130865,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0,0.104909176269996,0,6.09576953731672,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,0,0.250381861413,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0.214441591374926,0.782982875895635,0,0,0,0.358177682162975,2.77921302444875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0.139879507719444,0,0,0.646948868380091,0,1.09209638192014,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.478901577171454,0.41023272848151,0,0.484100767249525,0.645902582527404,0,0,0.11796972334774,0,0.231051332300676,0,0,0,0.902523940191087,0,2.34454203369928,0,0,0,0.675375846183947,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0.535701835878287,0,2.42786241694653,1.59363533945908,0,0,0,1.01954599465248,0.197318320688547,0,0.111231401892069,0.078493092850514,1.25692471932802,0,0,0,0,0.714765441766563,0,0.697448552208751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0.245148321753905,0,0.196308467114945,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,1.08786384305464,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0,0,0.124149428591716,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p5@BEGAIN | |short_description=p5@BEGAIN | ||
}} | }} |
Latest revision as of 10:39, 18 September 2015
Short description: | p5@BEGAIN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BEGAIN_5end |
Coexpression cluster: | NA |
Association with transcript: | -215bp_to_ENST00000443071, ENST00000557378, NM_001159531, uc010txa.1_5end |
EntrezGene: | BEGAIN |
HGNC: | 24163 |
UniProt: | G3V2K4Q9BUH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 5.17e-12 | 5 |
basophil mast progenitor cell | 5.17e-12 | 5 |
endocrine cell | 7.24e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.90e-54 | 9 |
upper respiratory tract | 4.81e-25 | 19 |
respiratory primordium | 9.90e-18 | 38 |
endoderm of foregut | 9.90e-18 | 38 |
segment of respiratory tract | 6.11e-14 | 47 |
pituitary gland | 5.20e-13 | 2 |
respiratory tract | 7.22e-12 | 54 |
regional part of metencephalon | 6.40e-11 | 9 |
metencephalon | 6.40e-11 | 9 |
future metencephalon | 6.40e-11 | 9 |
cerebellum | 8.98e-10 | 6 |
rhombic lip | 8.98e-10 | 6 |
caudate-putamen | 1.09e-08 | 3 |
dorsal striatum | 1.09e-08 | 3 |
organ system subdivision | 2.06e-08 | 223 |
segmental subdivision of hindbrain | 3.21e-08 | 12 |
hindbrain | 3.21e-08 | 12 |
presumptive hindbrain | 3.21e-08 | 12 |
respiratory system | 4.09e-08 | 74 |
segmental subdivision of nervous system | 1.35e-07 | 13 |
regional part of nervous system | 1.83e-07 | 53 |
regional part of brain | 1.83e-07 | 53 |
putamen | 3.40e-07 | 1 |
neural tube | 5.35e-07 | 56 |
neural rod | 5.35e-07 | 56 |
future spinal cord | 5.35e-07 | 56 |
neural keel | 5.35e-07 | 56 |
gland of diencephalon | 6.26e-07 | 4 |
neuroendocrine gland | 6.26e-07 | 4 |
brain | 9.29e-07 | 68 |
future brain | 9.29e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.62e-10 | 106 |
cell type cancer | 9.66e-08 | 143 |