FFCP PHASE1:Hg19::chr12:46661143..46661186,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:46661143..46661186,- to FFCP PHASE1:Hg19::chr12:46661143..46661186,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81539 | |EntrezGene=81539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13447 | |HGNC=13447 | ||
|TSSclassifier=strong | |||
|UniProt=F8VX04 | |UniProt=F8VX04 | ||
|association_with_transcript=297bp_to_ENST00000552197,uc009zkj.1_5end | |||
|cluster_id=chr12:46661143..46661186,- | |||
|description=CAGE_peak_12_at_SLC38A1_5end | |||
|id=chr12:46661143..46661186,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.81e-07,6;CL:0000031,8.81e-07,6;CL:0000404,8.81e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.54e-20!94;UBERON:0001016!8.54e-20!94;UBERON:0001017!1.79e-19!82;UBERON:0005743!4.17e-19!86;UBERON:0004121!2.28e-15!169;UBERON:0001049!6.69e-15!57;UBERON:0005068!6.69e-15!57;UBERON:0006241!6.69e-15!57;UBERON:0007135!6.69e-15!57;UBERON:0000924!1.35e-14!173;UBERON:0006601!1.35e-14!173;UBERON:0003075!3.36e-14!86;UBERON:0007284!3.36e-14!86;UBERON:0000955!4.32e-14!69;UBERON:0006238!4.32e-14!69;UBERON:0000064!4.11e-13!219;UBERON:0002346!4.79e-13!90;UBERON:0002616!9.98e-13!59;UBERON:0002780!2.32e-12!41;UBERON:0001890!2.32e-12!41;UBERON:0006240!2.32e-12!41;UBERON:0000153!1.29e-11!129;UBERON:0007811!1.29e-11!129;UBERON:0003080!1.42e-11!42;UBERON:0001893!5.30e-11!34;UBERON:0000033!6.76e-11!123;UBERON:0002020!1.12e-10!34;UBERON:0003528!1.12e-10!34;UBERON:0002791!1.84e-10!33;UBERON:0007023!2.68e-10!115;UBERON:0001869!2.88e-10!32;UBERON:0003056!4.09e-10!61;UBERON:0002619!2.25e-08!22;UBERON:0000956!4.85e-08!25;UBERON:0000203!4.85e-08!25;UBERON:0001950!1.04e-07!20;UBERON:0000468!9.47e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.06e-08;34!UBERON:0002020;1.06e-08;34!UBERON:0002619;1.21e-08;22!UBERON:0001893;1.22e-08;34!UBERON:0001869;1.67e-08;32!UBERON:0002791;1.80e-08;32!UBERON:0000073;2.29e-08;53!UBERON:0002616;2.29e-08;53!UBERON:0001950;1.11e-07;20!UBERON:0002780;1.83e-07;41!UBERON:0001890;1.83e-07;41!UBERON:0001017;4.11e-07;75!UBERON:0000956;4.35e-07;25!UBERON:0000203;4.35e-07;25!UBERON:0001016;9.84e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.72e-21,89;UBERON:0001017,5.24e-20,81;UBERON:0004121,3.67e-16,171;UBERON:0000924,3.67e-16,171;UBERON:0006601,3.67e-16,171;UBERON:0001049,5.16e-16,56;UBERON:0005068,5.16e-16,56;UBERON:0006241,5.16e-16,56;UBERON:0007135,5.16e-16,56;UBERON:0003075,4.43e-14,82;UBERON:0007284,4.43e-14,82;UBERON:0000073,7.35e-14,53;UBERON:0002616,7.35e-14,53;UBERON:0000955,1.92e-13,68;UBERON:0006238,1.92e-13,68;UBERON:0002346,9.14e-13,86;UBERON:0007023,7.27e-12,114;UBERON:0011216,4.15e-11,223;UBERON:0001893,7.88e-11,34;UBERON:0002780,1.56e-10,41;UBERON:0001890,1.56e-10,41;UBERON:0003080,1.56e-10,41;UBERON:0006240,1.56e-10,41;UBERON:0010371,1.72e-10,104;UBERON:0003528,2.05e-10,34;UBERON:0002020,2.05e-10,34;UBERON:0010314,8.55e-10,132;UBERON:0001869,9.74e-10,32;UBERON:0002791,1.68e-09,32;UBERON:0002619,3.46e-09,22;UBERON:0003056,4.08e-09,61;UBERON:0001950,3.90e-08,20;UBERON:0000956,1.52e-07,25;UBERON:0000203,1.52e-07,25;UBERON:0003076,4.98e-07,15;UBERON:0003057,4.98e-07,15;UBERON:0005631,9.50e-07,14;UBERON:0000158,9.50e-07,14 | |||
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| ||
|short_description=p12@SLC38A1 | |||
}} | }} |
Latest revision as of 10:43, 18 September 2015
Short description: | p12@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLC38A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 297bp_to_ENST00000552197, uc009zkj.1_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | F8VX04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.81e-07 | 6 |
neuroblast | 8.81e-07 | 6 |
electrically signaling cell | 8.81e-07 | 6 |