FFCP PHASE1:Hg19::chr1:169677928..169678005,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:169677928..169678005,-
|short_description=p3@SELL
|description=CAGE_peak_3_at_SELL_5end
|association_with_transcript=0bp_to_NR_029467,uc010pls.1_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6402 | |EntrezGene=6402 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10720 | |HGNC=10720 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NR_029467,uc010pls.1_5end | |||
|cluster_id=chr1:169677928..169678005,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_SELL_5end | |||
|id=chr1:169677928..169678005,- | |||
|ontology_enrichment_celltype=CL:0000738!1.72e-67!140;CL:0002087!1.16e-59!119;CL:0002031!1.91e-53!124;CL:0000037!1.43e-51!172;CL:0000566!1.43e-51!172;CL:0000988!1.16e-46!182;CL:0002032!6.74e-46!165;CL:0000837!6.74e-46!165;CL:0002057!3.07e-40!42;CL:0000860!1.98e-36!45;CL:0000766!2.81e-35!76;CL:0002194!1.44e-29!63;CL:0000576!1.44e-29!63;CL:0000040!1.44e-29!63;CL:0000559!1.44e-29!63;CL:0002009!4.00e-28!65;CL:0000839!3.96e-27!70;CL:0000838!4.37e-26!52;CL:0000557!2.57e-25!71;CL:0000542!2.63e-25!53;CL:0000051!2.63e-25!53;CL:0000763!1.24e-20!112;CL:0000049!1.24e-20!112;CL:0000791!1.59e-16!18;CL:0000789!1.59e-16!18;CL:0002420!1.59e-16!18;CL:0002419!1.59e-16!18;CL:0000790!1.59e-16!18;CL:0000084!5.70e-14!25;CL:0000827!5.70e-14!25;CL:0000625!6.21e-12!11;CL:0000945!4.94e-11!24;CL:0000826!4.94e-11!24;CL:0000094!1.29e-10!8;CL:0000236!2.18e-10!14;CL:0002393!2.21e-09!9;CL:0002397!2.21e-09!9;CL:0000134!1.90e-08!358;CL:0002320!8.80e-08!365;CL:0000624!1.51e-07!6;CL:0000081!4.69e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.19e-41;33!CL:0002057;3.19e-41;33!CL:0000473;1.34e-31;39!CL:0000234;1.34e-31;39!CL:0000576;4.21e-31;48!CL:0002087;4.18e-24;104!CL:0000766;1.13e-23;69!CL:0000791;3.75e-23;18!CL:0000789;3.75e-23;18!CL:0002419;3.75e-23;18!CL:0000084;5.28e-17;25!CL:0000625;2.13e-16;11!CL:0000738;2.99e-16;136!CL:0000542;4.31e-16;53!CL:0000094;1.58e-14;8!CL:0000236;9.07e-12;13!CL:0000988;5.77e-11;177!CL:0000624;4.70e-10;6!CL:0000945;4.93e-10;24!CL:0000081;5.07e-10;11!CL:0002393;5.94e-10;6!CL:0002397;5.94e-10;6!CL:0000763;8.32e-10;100!CL:0000219;4.23e-08;193!CL:0000775;6.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.84e-83,136;CL:0002087,1.23e-77,115;CL:0002031,5.80e-67,120;CL:0000037,3.15e-64,168;CL:0000988,1.35e-59,177;CL:0002032,8.12e-58,161;CL:0000837,8.12e-58,161;CL:0000860,5.44e-57,42;CL:0002057,5.44e-57,42;CL:0000473,9.19e-53,48;CL:0000234,9.19e-53,48;CL:0000766,1.48e-50,72;CL:0002194,3.09e-43,59;CL:0000576,3.09e-43,59;CL:0000040,3.09e-43,59;CL:0000559,3.09e-43,59;CL:0002009,2.32e-41,61;CL:0000839,3.61e-37,66;CL:0000557,2.09e-36,67;CL:0000838,1.07e-28,52;CL:0000763,3.39e-28,108;CL:0000049,3.39e-28,108;CL:0000542,6.06e-28,53;CL:0000051,6.06e-28,53;CL:0000791,3.34e-23,18;CL:0000789,3.34e-23,18;CL:0002420,3.34e-23,18;CL:0002419,3.34e-23,18;CL:0000790,3.34e-23,18;CL:0000084,4.79e-17,25;CL:0000827,4.79e-17,25;CL:0000134,9.29e-17,354;CL:0000625,2.20e-16,11;CL:0002320,5.91e-16,361;CL:0000094,1.68e-14,8;CL:0000219,3.73e-13,386;CL:0002393,9.73e-13,9;CL:0002397,9.73e-13,9;CL:0000236,8.56e-11,14;CL:0000624,4.00e-10,6;CL:0000945,4.26e-10,24;CL:0000826,4.26e-10,24;CL:0000081,5.29e-10,11;CL:0000048,8.12e-10,427;CL:0000034,1.13e-09,441;CL:0000723,2.29e-09,433;CL:0000775,6.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-40;42!CL:0000790;3.75e-23;18!CL:0000051;4.31e-16;53!CL:0000049;3.89e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.36e-34!102;UBERON:0003061!2.36e-34!102;UBERON:0002193!1.35e-31!112;UBERON:0002371!8.89e-22!80;UBERON:0001474!4.46e-19!86;UBERON:0002405!9.62e-18!115;UBERON:0004765!7.50e-14!101;UBERON:0001434!7.50e-14!101;UBERON:0000178!5.98e-11!15;UBERON:0000179!5.98e-11!15;UBERON:0000463!5.98e-11!15;UBERON:0007023!8.67e-11!115;UBERON:0003081!6.90e-09!216;UBERON:0002384!3.36e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.28e-15;15!UBERON:0000179;1.28e-15;15!UBERON:0000463;1.28e-15;15!UBERON:0002390;4.50e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.38e-48,98;UBERON:0003061,4.38e-48,98;UBERON:0002193,3.42e-45,108;UBERON:0002371,3.79e-32,76;UBERON:0002405,7.97e-32,93;UBERON:0001474,9.15e-29,82;UBERON:0004765,5.70e-25,90;UBERON:0001434,4.17e-21,100;UBERON:0000178,1.27e-15,15;UBERON:0000179,1.27e-15,15;UBERON:0000463,1.27e-15,15;UBERON:0002384,7.28e-15,371;UBERON:0003081,1.64e-14,203;UBERON:0002204,1.01e-07,167 | |||
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|short_description=p3@SELL | |||
}} | }} |
Latest revision as of 13:34, 18 September 2015
Short description: | p3@SELL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SELL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_NR_029467, uc010pls.1_5end |
EntrezGene: | SELL |
HGNC: | 10720 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.38e-48 | 98 |
blood island | 4.38e-48 | 98 |
hemolymphoid system | 3.42e-45 | 108 |
bone marrow | 3.79e-32 | 76 |
immune system | 7.97e-32 | 93 |
bone element | 9.15e-29 | 82 |
skeletal element | 5.70e-25 | 90 |
skeletal system | 4.17e-21 | 100 |
blood | 1.27e-15 | 15 |
haemolymphatic fluid | 1.27e-15 | 15 |
organism substance | 1.27e-15 | 15 |
connective tissue | 7.28e-15 | 371 |
lateral plate mesoderm | 1.64e-14 | 203 |
musculoskeletal system | 1.01e-07 | 167 |