FFCP PHASE1:Hg19::chr1:173837488..173837526,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:173837488..173837526,+ to FFCP PHASE1:Hg19::chr1:173837488..173837526,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84614 | |EntrezGene=84614 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28365 | |HGNC=28365 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TC79,Q8WYT0 | |UniProt=Q5TC79,Q8WYT0 | ||
|association_with_transcript=0bp_to_ENST00000427304,ENST00000432989,NM_001122770,NM_032522,uc001gjq.3,uc001gjr.2,uc009wwp.1_5end | |||
|cluster_id=chr1:173837488..173837526,+ | |||
|description=CAGE_peak_1_at_ZBTB37_5end | |||
|id=chr1:173837488..173837526,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.25e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.31e-25!94;UBERON:0001016!1.31e-25!94;UBERON:0001017!2.11e-25!82;UBERON:0005743!3.71e-24!86;UBERON:0007023!3.16e-23!115;UBERON:0001049!3.02e-22!57;UBERON:0005068!3.02e-22!57;UBERON:0006241!3.02e-22!57;UBERON:0007135!3.02e-22!57;UBERON:0000955!3.74e-21!69;UBERON:0006238!3.74e-21!69;UBERON:0002616!4.75e-20!59;UBERON:0002780!2.52e-17!41;UBERON:0001890!2.52e-17!41;UBERON:0006240!2.52e-17!41;UBERON:0003080!1.38e-16!42;UBERON:0002346!1.28e-13!90;UBERON:0001893!1.79e-13!34;UBERON:0002020!2.54e-13!34;UBERON:0003528!2.54e-13!34;UBERON:0002791!5.09e-13!33;UBERON:0001869!2.43e-12!32;UBERON:0003075!3.80e-12!86;UBERON:0007284!3.80e-12!86;UBERON:0000924!7.21e-10!173;UBERON:0006601!7.21e-10!173;UBERON:0000153!1.14e-09!129;UBERON:0007811!1.14e-09!129;UBERON:0002619!2.90e-09!22;UBERON:0000956!3.27e-09!25;UBERON:0000203!3.27e-09!25;UBERON:0003056!3.69e-09!61;UBERON:0001950!4.57e-09!20;UBERON:0004121!8.56e-09!169;UBERON:0000033!3.09e-08!123;UBERON:0003076!6.82e-07!15;UBERON:0003057!6.82e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.47e-13;53!UBERON:0002616;4.47e-13;53!UBERON:0002780;5.70e-13;41!UBERON:0001890;5.70e-13;41!UBERON:0003528;9.10e-12;34!UBERON:0002020;9.10e-12;34!UBERON:0001893;9.69e-12;34!UBERON:0002791;1.50e-11;32!UBERON:0001869;1.87e-11;32!UBERON:0001017;9.42e-11;75!UBERON:0000955;1.20e-10;68!UBERON:0001016;2.23e-10;83!UBERON:0000956;2.64e-09;25!UBERON:0000203;2.64e-09;25!UBERON:0002619;3.12e-09;22!UBERON:0001950;5.07e-09;20!UBERON:0007023;6.72e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.66e-27,89;UBERON:0001017,3.82e-26,81;UBERON:0007023,4.28e-23,114;UBERON:0001049,4.29e-23,56;UBERON:0005068,4.29e-23,56;UBERON:0006241,4.29e-23,56;UBERON:0007135,4.29e-23,56;UBERON:0000955,7.25e-22,68;UBERON:0006238,7.25e-22,68;UBERON:0000073,2.38e-21,53;UBERON:0002616,2.38e-21,53;UBERON:0002780,2.11e-17,41;UBERON:0001890,2.11e-17,41;UBERON:0003080,2.11e-17,41;UBERON:0006240,2.11e-17,41;UBERON:0002346,7.02e-15,86;UBERON:0001893,1.56e-13,34;UBERON:0003528,2.23e-13,34;UBERON:0002020,2.23e-13,34;UBERON:0003075,2.46e-13,82;UBERON:0007284,2.46e-13,82;UBERON:0002791,1.68e-12,32;UBERON:0001869,2.15e-12,32;UBERON:0003056,3.09e-10,61;UBERON:0004121,6.87e-10,171;UBERON:0000924,6.87e-10,171;UBERON:0006601,6.87e-10,171;UBERON:0002619,2.66e-09,22;UBERON:0000956,3.00e-09,25;UBERON:0000203,3.00e-09,25;UBERON:0001950,4.20e-09,20;UBERON:0011216,1.80e-08,223;UBERON:0010371,1.41e-07,104;UBERON:0003076,6.42e-07,15;UBERON:0003057,6.42e-07,15 | |||
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| ||
|short_description=p1@ZBTB37 | |||
}} | }} |
Latest revision as of 18:23, 18 September 2015
Short description: | p1@ZBTB37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZBTB37_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000427304, ENST00000432989, NM_001122770, NM_032522, uc001gjq.3, uc001gjr.2, uc009wwp.1_5end |
EntrezGene: | ZBTB37 |
HGNC: | 28365 |
UniProt: | Q5TC79Q8WYT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.66e-27 | 89 |
central nervous system | 3.82e-26 | 81 |
adult organism | 4.28e-23 | 114 |
neural tube | 4.29e-23 | 56 |
neural rod | 4.29e-23 | 56 |
future spinal cord | 4.29e-23 | 56 |
neural keel | 4.29e-23 | 56 |
brain | 7.25e-22 | 68 |
future brain | 7.25e-22 | 68 |
regional part of nervous system | 2.38e-21 | 53 |
regional part of brain | 2.38e-21 | 53 |
regional part of forebrain | 2.11e-17 | 41 |
forebrain | 2.11e-17 | 41 |
anterior neural tube | 2.11e-17 | 41 |
future forebrain | 2.11e-17 | 41 |
neurectoderm | 7.02e-15 | 86 |
telencephalon | 1.56e-13 | 34 |
brain grey matter | 2.23e-13 | 34 |
gray matter | 2.23e-13 | 34 |
neural plate | 2.46e-13 | 82 |
presumptive neural plate | 2.46e-13 | 82 |
regional part of telencephalon | 1.68e-12 | 32 |
cerebral hemisphere | 2.15e-12 | 32 |
pre-chordal neural plate | 3.09e-10 | 61 |
ectoderm-derived structure | 6.87e-10 | 171 |
ectoderm | 6.87e-10 | 171 |
presumptive ectoderm | 6.87e-10 | 171 |
regional part of cerebral cortex | 2.66e-09 | 22 |
cerebral cortex | 3.00e-09 | 25 |
pallium | 3.00e-09 | 25 |
neocortex | 4.20e-09 | 20 |
organ system subdivision | 1.80e-08 | 223 |
ecto-epithelium | 1.41e-07 | 104 |
posterior neural tube | 6.42e-07 | 15 |
chordal neural plate | 6.42e-07 | 15 |