FFCP PHASE1:Hg19::chr1:174128615..174128633,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001gjw.2,uc001gjx.2,uc009wwq.1_5end | |association_with_transcript=0bp_to_uc001gjw.2,uc001gjx.2,uc009wwq.1_5end | ||
|cluster_id=chr1:174128615..174128633,+ | |||
|description=CAGE_peak_7_at_RABGAP1L_5end | |description=CAGE_peak_7_at_RABGAP1L_5end | ||
|id=chr1:174128615..174128633,+ | |id=chr1:174128615..174128633,+ | ||
|ontology_enrichment_celltype=CL:0000542!6.94e-13!53;CL:0000051!6.94e-13!53;CL:0000838!1.68e-12!52;CL:0000791!2.98e-10!18;CL:0000789!2.98e-10!18;CL:0002420!2.98e-10!18;CL:0002419!2.98e-10!18;CL:0000790!2.98e-10!18;CL:0000084!3.05e-09!25;CL:0000827!3.05e-09!25;CL:0000625!1.05e-07!11 | |ontology_enrichment_celltype=CL:0000542!6.94e-13!53;CL:0000051!6.94e-13!53;CL:0000838!1.68e-12!52;CL:0000791!2.98e-10!18;CL:0000789!2.98e-10!18;CL:0002420!2.98e-10!18;CL:0002419!2.98e-10!18;CL:0000790!2.98e-10!18;CL:0000084!3.05e-09!25;CL:0000827!3.05e-09!25;CL:0000625!1.05e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.87e-11;18!CL:0000789;3.87e-11;18!CL:0002419;3.87e-11;18!CL:0000084;1.34e-10;25!CL:0000542;3.00e-09;53!CL:0000625;1.98e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.55e-14,53;CL:0000051,5.55e-14,53;CL:0000838,1.44e-13,52;CL:0000791,6.74e-11,18;CL:0000789,6.74e-11,18;CL:0002420,6.74e-11,18;CL:0002419,6.74e-11,18;CL:0000790,6.74e-11,18;CL:0000084,4.04e-10,25;CL:0000827,4.04e-10,25;CL:0000625,3.65e-08,11;CL:0000037,9.93e-08,168;CL:0000988,3.22e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;3.87e-11;18!CL:0000051;3.00e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-12!115;UBERON:0000955!3.10e-11!69;UBERON:0006238!3.10e-11!69;UBERON:0001049!6.36e-10!57;UBERON:0005068!6.36e-10!57;UBERON:0006241!6.36e-10!57;UBERON:0007135!6.36e-10!57;UBERON:0001017!1.01e-09!82;UBERON:0005743!2.00e-09!86;UBERON:0002616!2.58e-09!59;UBERON:0000073!3.04e-09!94;UBERON:0001016!3.04e-09!94;UBERON:0002780!3.96e-09!41;UBERON:0001890!3.96e-09!41;UBERON:0006240!3.96e-09!41;UBERON:0003080!4.59e-09!42;UBERON:0001893!7.14e-08!34;UBERON:0001869!1.06e-07!32;UBERON:0002020!1.41e-07!34;UBERON:0003528!1.41e-07!34;UBERON:0002791!2.02e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.82e-07;22!UBERON:0001869;5.38e-07;32!UBERON:0002780;5.89e-07;41!UBERON:0001890;5.89e-07;41!UBERON:0000073;6.09e-07;53!UBERON:0002616;6.09e-07;53!UBERON:0000956;7.66e-07;25!UBERON:0000203;7.66e-07;25!UBERON:0002791;8.39e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.62e-12,114;UBERON:0000955,1.03e-11,68;UBERON:0006238,1.03e-11,68;UBERON:0000073,4.89e-11,53;UBERON:0002616,4.89e-11,53;UBERON:0001049,1.54e-10,56;UBERON:0005068,1.54e-10,56;UBERON:0006241,1.54e-10,56;UBERON:0007135,1.54e-10,56;UBERON:0001017,4.20e-10,81;UBERON:0001016,6.04e-10,89;UBERON:0002780,7.01e-10,41;UBERON:0001890,7.01e-10,41;UBERON:0003080,7.01e-10,41;UBERON:0006240,7.01e-10,41;UBERON:0001893,1.48e-08,34;UBERON:0001869,2.26e-08,32;UBERON:0003528,3.12e-08,34;UBERON:0002020,3.12e-08,34;UBERON:0002791,9.66e-08,32;UBERON:0002619,3.15e-07,22;UBERON:0003075,3.23e-07,82;UBERON:0007284,3.23e-07,82;UBERON:0002346,4.49e-07,86;UBERON:0000956,4.94e-07,25;UBERON:0000203,4.94e-07,25 | |||
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| ||
|short_description=p7@RABGAP1L | |short_description=p7@RABGAP1L | ||
}} | }} |
Latest revision as of 18:42, 18 September 2015
Short description: | p7@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RABGAP1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001gjw.2, uc001gjx.2, uc009wwq.1_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.55e-14 | 53 |
common lymphoid progenitor | 5.55e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.44e-13 | 52 |
mature alpha-beta T cell | 6.74e-11 | 18 |
alpha-beta T cell | 6.74e-11 | 18 |
immature T cell | 6.74e-11 | 18 |
mature T cell | 6.74e-11 | 18 |
immature alpha-beta T cell | 6.74e-11 | 18 |
T cell | 4.04e-10 | 25 |
pro-T cell | 4.04e-10 | 25 |
CD8-positive, alpha-beta T cell | 3.65e-08 | 11 |
hematopoietic stem cell | 9.93e-08 | 168 |
hematopoietic cell | 3.22e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.62e-12 | 114 |
brain | 1.03e-11 | 68 |
future brain | 1.03e-11 | 68 |
regional part of nervous system | 4.89e-11 | 53 |
regional part of brain | 4.89e-11 | 53 |
neural tube | 1.54e-10 | 56 |
neural rod | 1.54e-10 | 56 |
future spinal cord | 1.54e-10 | 56 |
neural keel | 1.54e-10 | 56 |
central nervous system | 4.20e-10 | 81 |
nervous system | 6.04e-10 | 89 |
regional part of forebrain | 7.01e-10 | 41 |
forebrain | 7.01e-10 | 41 |
anterior neural tube | 7.01e-10 | 41 |
future forebrain | 7.01e-10 | 41 |
telencephalon | 1.48e-08 | 34 |
cerebral hemisphere | 2.26e-08 | 32 |
brain grey matter | 3.12e-08 | 34 |
gray matter | 3.12e-08 | 34 |
regional part of telencephalon | 9.66e-08 | 32 |
regional part of cerebral cortex | 3.15e-07 | 22 |
neural plate | 3.23e-07 | 82 |
presumptive neural plate | 3.23e-07 | 82 |
neurectoderm | 4.49e-07 | 86 |
cerebral cortex | 4.94e-07 | 25 |
pallium | 4.94e-07 | 25 |