FFCP PHASE1:Hg19::chr6:41863098..41863120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25862 | |EntrezGene=25862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20078 | |HGNC=20078 | ||
|TSSclassifier=strong | |||
|UniProt=Q70CQ1 | |UniProt=Q70CQ1 | ||
|association_with_transcript=0bp_to_ENST00000373006,NM_018561,uc003ori.2_5end | |association_with_transcript=0bp_to_ENST00000373006,NM_018561,uc003ori.2_5end | ||
|cluster_id=chr6:41863098..41863120,- | |||
|description=CAGE_peak_1_at_USP49_5end | |description=CAGE_peak_1_at_USP49_5end | ||
|id=chr6:41863098..41863120,- | |id=chr6:41863098..41863120,- | ||
|ontology_enrichment_celltype=CL:0000763!3.89e-22!112;CL:0000049!3.89e-22!112;CL:0000037!4.38e-20!172;CL:0000566!4.38e-20!172;CL:0002032!9.58e-19!165;CL:0000837!9.58e-19!165;CL:0000988!1.17e-18!182;CL:0000738!1.31e-09!140;CL:0000766!7.09e-09!76;CL:0002009!8.54e-09!65;CL:0002194!2.25e-08!63;CL:0000576!2.25e-08!63;CL:0000040!2.25e-08!63;CL:0000559!2.25e-08!63;CL:0000839!5.65e-08!70;CL:0000557!8.06e-08!71;CL:0002087!2.70e-07!119;CL:0000860!3.13e-07!45;CL:0002031!7.13e-07!124 | |ontology_enrichment_celltype=CL:0000763!3.89e-22!112;CL:0000049!3.89e-22!112;CL:0000037!4.38e-20!172;CL:0000566!4.38e-20!172;CL:0002032!9.58e-19!165;CL:0000837!9.58e-19!165;CL:0000988!1.17e-18!182;CL:0000738!1.31e-09!140;CL:0000766!7.09e-09!76;CL:0002009!8.54e-09!65;CL:0002194!2.25e-08!63;CL:0000576!2.25e-08!63;CL:0000040!2.25e-08!63;CL:0000559!2.25e-08!63;CL:0000839!5.65e-08!70;CL:0000557!8.06e-08!71;CL:0002087!2.70e-07!119;CL:0000860!3.13e-07!45;CL:0002031!7.13e-07!124 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.59e-23,168;CL:0000988,1.14e-22,177;CL:0002032,4.54e-22,161;CL:0000837,4.54e-22,161;CL:0000763,8.54e-22,108;CL:0000049,8.54e-22,108;CL:0000738,6.74e-10,136;CL:0002087,3.79e-07,115 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!2.42e-20!51;DOID:0060083!2.42e-20!51;DOID:1240!7.40e-18!39;DOID:8692!6.63e-14!31;DOID:0050686!2.37e-07!137;DOID:162!9.30e-07!235 | |ontology_enrichment_disease=DOID:2531!2.42e-20!51;DOID:0060083!2.42e-20!51;DOID:1240!7.40e-18!39;DOID:8692!6.63e-14!31;DOID:0050686!2.37e-07!137;DOID:162!9.30e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.44e-18;39!DOID:8692;1.05e-17;31!DOID:2531;4.13e-16;51!DOID:0060083;4.13e-16;51!DOID:0060058;7.66e-07;10 | |ontology_enrichment_disease_v019=DOID:1240;1.44e-18;39!DOID:8692;1.05e-17;31!DOID:2531;4.13e-16;51!DOID:0060083;4.13e-16;51!DOID:0060058;7.66e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.58e-26,51;DOID:0060083,1.58e-26,51;DOID:1240,1.14e-24,39;DOID:8692,4.66e-19,31;DOID:0050686,6.14e-09,137;DOID:1036,8.75e-07,8;DOID:0060058,9.29e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.79e-11!82;UBERON:0001049!9.28e-11!57;UBERON:0005068!9.28e-11!57;UBERON:0006241!9.28e-11!57;UBERON:0007135!9.28e-11!57;UBERON:0005743!1.58e-10!86;UBERON:0000955!2.35e-09!69;UBERON:0006238!2.35e-09!69;UBERON:0002780!2.63e-09!41;UBERON:0001890!2.63e-09!41;UBERON:0006240!2.63e-09!41;UBERON:0003080!3.11e-09!42;UBERON:0000073!3.50e-09!94;UBERON:0001016!3.50e-09!94;UBERON:0002616!5.23e-09!59;UBERON:0002390!2.20e-07!102;UBERON:0003061!2.20e-07!102;UBERON:0002020!2.83e-07!34;UBERON:0003528!2.83e-07!34;UBERON:0001869!3.34e-07!32;UBERON:0001893!3.57e-07!34;UBERON:0001474!4.50e-07!86;UBERON:0002791!7.38e-07!33;UBERON:0002371!9.83e-07!80 | |ontology_enrichment_uberon=UBERON:0001017!3.79e-11!82;UBERON:0001049!9.28e-11!57;UBERON:0005068!9.28e-11!57;UBERON:0006241!9.28e-11!57;UBERON:0007135!9.28e-11!57;UBERON:0005743!1.58e-10!86;UBERON:0000955!2.35e-09!69;UBERON:0006238!2.35e-09!69;UBERON:0002780!2.63e-09!41;UBERON:0001890!2.63e-09!41;UBERON:0006240!2.63e-09!41;UBERON:0003080!3.11e-09!42;UBERON:0000073!3.50e-09!94;UBERON:0001016!3.50e-09!94;UBERON:0002616!5.23e-09!59;UBERON:0002390!2.20e-07!102;UBERON:0003061!2.20e-07!102;UBERON:0002020!2.83e-07!34;UBERON:0003528!2.83e-07!34;UBERON:0001869!3.34e-07!32;UBERON:0001893!3.57e-07!34;UBERON:0001474!4.50e-07!86;UBERON:0002791!7.38e-07!33;UBERON:0002371!9.83e-07!80 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.88e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002619;7.88e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.51e-11,56;UBERON:0005068,5.51e-11,56;UBERON:0006241,5.51e-11,56;UBERON:0007135,5.51e-11,56;UBERON:0001017,7.56e-11,81;UBERON:0000073,3.83e-10,53;UBERON:0002616,3.83e-10,53;UBERON:0001016,5.17e-10,89;UBERON:0002780,4.36e-09,41;UBERON:0001890,4.36e-09,41;UBERON:0003080,4.36e-09,41;UBERON:0006240,4.36e-09,41;UBERON:0000955,3.37e-08,68;UBERON:0006238,3.37e-08,68;UBERON:0001869,1.49e-07,32;UBERON:0003528,3.29e-07,34;UBERON:0002020,3.29e-07,34;UBERON:0002619,3.80e-07,22 | |||
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| ||
|short_description=p1@USP49 | |short_description=p1@USP49 | ||
}} | }} |
Latest revision as of 19:13, 18 September 2015
Short description: | p1@USP49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP49_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373006, NM_018561, uc003ori.2_5end |
EntrezGene: | USP49 |
HGNC: | 20078 |
UniProt: | Q70CQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.59e-23 | 168 |
hematopoietic cell | 1.14e-22 | 177 |
hematopoietic oligopotent progenitor cell | 4.54e-22 | 161 |
hematopoietic multipotent progenitor cell | 4.54e-22 | 161 |
myeloid cell | 8.54e-22 | 108 |
common myeloid progenitor | 8.54e-22 | 108 |
leukocyte | 6.74e-10 | 136 |
nongranular leukocyte | 3.79e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.51e-11 | 56 |
neural rod | 5.51e-11 | 56 |
future spinal cord | 5.51e-11 | 56 |
neural keel | 5.51e-11 | 56 |
central nervous system | 7.56e-11 | 81 |
regional part of nervous system | 3.83e-10 | 53 |
regional part of brain | 3.83e-10 | 53 |
nervous system | 5.17e-10 | 89 |
regional part of forebrain | 4.36e-09 | 41 |
forebrain | 4.36e-09 | 41 |
anterior neural tube | 4.36e-09 | 41 |
future forebrain | 4.36e-09 | 41 |
brain | 3.37e-08 | 68 |
future brain | 3.37e-08 | 68 |
cerebral hemisphere | 1.49e-07 | 32 |
brain grey matter | 3.29e-07 | 34 |
gray matter | 3.29e-07 | 34 |
regional part of cerebral cortex | 3.80e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.58e-26 | 51 |
immune system cancer | 1.58e-26 | 51 |
leukemia | 1.14e-24 | 39 |
myeloid leukemia | 4.66e-19 | 31 |
organ system cancer | 6.14e-09 | 137 |
chronic leukemia | 8.75e-07 | 8 |
lymphoma | 9.29e-07 | 10 |