FFCP PHASE1:Hg19::chr4:81105091..81105107,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56978 | |EntrezGene=56978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13993 | |HGNC=13993 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000509375_5end | |association_with_transcript=56bp_to_ENST00000509375_5end | ||
|cluster_id=chr4:81105091..81105107,+ | |||
|coexpression_cluster_id=C4432 | |||
|description=CAGE_peak_9_at_PRDM8_5end | |description=CAGE_peak_9_at_PRDM8_5end | ||
|id=chr4:81105091..81105107,+ | |id=chr4:81105091..81105107,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.14e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.21e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.20e-19!22;UBERON:0001950!8.27e-18!20;UBERON:0000956!3.75e-16!25;UBERON:0000203!3.75e-16!25;UBERON:0001893!4.34e-15!34;UBERON:0001869!6.78e-15!32;UBERON:0002791!2.86e-14!33;UBERON:0001017!3.63e-14!82;UBERON:0000073!8.49e-14!94;UBERON:0001016!8.49e-14!94;UBERON:0002020!1.28e-13!34;UBERON:0003528!1.28e-13!34;UBERON:0005743!1.82e-13!86;UBERON:0002780!1.16e-12!41;UBERON:0001890!1.16e-12!41;UBERON:0006240!1.16e-12!41;UBERON:0003080!4.29e-12!42;UBERON:0000955!1.63e-11!69;UBERON:0006238!1.63e-11!69;UBERON:0001049!2.47e-11!57;UBERON:0005068!2.47e-11!57;UBERON:0006241!2.47e-11!57;UBERON:0007135!2.47e-11!57;UBERON:0002616!1.94e-10!59;UBERON:0003056!2.22e-07!61;UBERON:0000200!4.43e-07!6;UBERON:0007023!8.38e-07!115 | |ontology_enrichment_uberon=UBERON:0002619!1.20e-19!22;UBERON:0001950!8.27e-18!20;UBERON:0000956!3.75e-16!25;UBERON:0000203!3.75e-16!25;UBERON:0001893!4.34e-15!34;UBERON:0001869!6.78e-15!32;UBERON:0002791!2.86e-14!33;UBERON:0001017!3.63e-14!82;UBERON:0000073!8.49e-14!94;UBERON:0001016!8.49e-14!94;UBERON:0002020!1.28e-13!34;UBERON:0003528!1.28e-13!34;UBERON:0005743!1.82e-13!86;UBERON:0002780!1.16e-12!41;UBERON:0001890!1.16e-12!41;UBERON:0006240!1.16e-12!41;UBERON:0003080!4.29e-12!42;UBERON:0000955!1.63e-11!69;UBERON:0006238!1.63e-11!69;UBERON:0001049!2.47e-11!57;UBERON:0005068!2.47e-11!57;UBERON:0006241!2.47e-11!57;UBERON:0007135!2.47e-11!57;UBERON:0002616!1.94e-10!59;UBERON:0003056!2.22e-07!61;UBERON:0000200!4.43e-07!6;UBERON:0007023!8.38e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.92e-75;22!UBERON:0001950;2.40e-67;20!UBERON:0000956;1.95e-65;25!UBERON:0000203;1.95e-65;25!UBERON:0001869;1.03e-53;32!UBERON:0001893;1.31e-48;34!UBERON:0002791;1.49e-48;32!UBERON:0003528;4.76e-45;34!UBERON:0002020;4.76e-45;34!UBERON:0002780;6.10e-33;41!UBERON:0001890;6.10e-33;41!UBERON:0000200;3.56e-23;6!UBERON:0000073;6.65e-20;53!UBERON:0002616;6.65e-20;53!UBERON:0002021;3.14e-19;5!UBERON:0000349;6.05e-19;5!UBERON:0001871;7.71e-19;6!UBERON:0001872;1.10e-18;5!UBERON:0000955;2.33e-15;68!UBERON:0001017;2.23e-14;75!UBERON:0001870;2.93e-12;3!UBERON:0001016;8.94e-12;83!UBERON:0002702;3.86e-09;2!UBERON:0001954;5.82e-09;2!UBERON:0003022;5.82e-09;2!UBERON:0002421;5.82e-09;2!UBERON:0002600;5.82e-09;2!UBERON:0002771;1.23e-08;2!UBERON:0001876;1.40e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.93e-75,22;UBERON:0001950,7.01e-68,20;UBERON:0000956,6.66e-66,25;UBERON:0000203,6.66e-66,25;UBERON:0001869,9.56e-61,32;UBERON:0001893,6.52e-57,34;UBERON:0002791,2.00e-55,32;UBERON:0003528,6.54e-52,34;UBERON:0002020,6.54e-52,34;UBERON:0002780,2.27e-46,41;UBERON:0001890,2.27e-46,41;UBERON:0003080,2.27e-46,41;UBERON:0006240,2.27e-46,41;UBERON:0001017,4.44e-39,81;UBERON:0001016,4.36e-37,89;UBERON:0000073,1.15e-34,53;UBERON:0002616,1.15e-34,53;UBERON:0000955,6.18e-33,68;UBERON:0006238,6.18e-33,68;UBERON:0001049,1.64e-32,56;UBERON:0005068,1.64e-32,56;UBERON:0006241,1.64e-32,56;UBERON:0007135,1.64e-32,56;UBERON:0003056,5.84e-32,61;UBERON:0003075,3.40e-24,82;UBERON:0007284,3.40e-24,82;UBERON:0000200,2.50e-23,6;UBERON:0002346,8.88e-23,86;UBERON:0004121,1.86e-19,171;UBERON:0000924,1.86e-19,171;UBERON:0006601,1.86e-19,171;UBERON:0010371,2.49e-19,104;UBERON:0002021,2.82e-19,5;UBERON:0001871,6.53e-19,6;UBERON:0000349,7.20e-19,5;UBERON:0001872,8.35e-19,5;UBERON:0011216,3.91e-16,223;UBERON:0010314,6.79e-14,132;UBERON:0007023,4.08e-13,114;UBERON:0001870,1.97e-12,3;UBERON:0002702,4.03e-09,2;UBERON:0001954,5.95e-09,2;UBERON:0003022,5.95e-09,2;UBERON:0002421,5.95e-09,2;UBERON:0002600,5.95e-09,2;UBERON:0002771,9.81e-09,2;UBERON:0001876,1.67e-08,2;UBERON:0005253,5.84e-08,2;UBERON:0000025,6.82e-07,192 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0.587200878669695,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.697287110717054,0,0,0.575384784644301,0.256160706529101,0,1.03423704220986,1.29096936716765,0,0.564727018627814,0.272906150057846,0.224723484445085,0.918251677112708,0.641858054152187,0,0.329851300186716,0.199463657621632,0.426224750532694,0.580418477257168,2.26954089876456,0.622822248995575,0,0.521482918420201,0,3.63239701580021,0.368277635987565,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0.569212969109448,0,0,0,1.12101712596307,0.263384084775077,0.196709770113833,0,0.616804496998528,0,0.32592226663359,0,0,0.222820913770347,0,0,0.270803863765016,0,0.260118695119756,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0.392937226493138,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0.709336764396714,0,0,0,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0.375355559615893,0,0,0,0.300476117813194,0,0.179389635688862,0,0,0,0.206105058476878,0,0,0.337552664482532,0,0,0.184099797284599,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.301586917234893,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.268675568108545,0,0.383382679165211,0,0,0,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0,0.205476322550383,0,0.336255431980582,0,0,0,0.254094624222463,1.30139853857622,4.63973287666617,1.50764638800914,2.55175500661265,0,0,0.414415513436035,0,0,0,0,0.535286966391485,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0.64341568457443,0,0,0.177561725313127,0,0.519254429183621,0.232420756919918,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0.290012154876366,0.462145851343933,0,0.413509717453592,0.107420244868274,0,0.340906509664404,0.534192213880424,0,0.192190067365106,0.255225424989168,0,0.929691098594572,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0.511795582622668,0,0.318203247925937,0,0.719489830333259,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0.561594356226918,0.456469358066384,0,0,0,0.321176150207399,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,1.1253553312841,0.445234820091624,0.16480387422676,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.295930216910801,0,0,1.93866549219044,2.04089815956073,3.99227596002388,0,0,0,0.1137934482855,0,0,0.344743373241465,0,9.0284997365312,0.885741385813839,0,0,0.221158519862449,0.591095237907095,2.19385397153973,0,0.139423744278603,0.692552326534174,0,0,0,0,0,0.183195186803725,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,1.60515529459758,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,1.53036380815245,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0,0.225980740780532,0.274083849293502,0,1.96263467463224,0,0,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0.209205692624666,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0.53746777989381,0.360299883542404,0,0.0787831823072236,0,0,0,0,5.56660782866512,2.31545790389679,0,0,0,0,0,2.97672827624321,0,0,0.104909176269996,0.316801009558219,0.537862017998534,0,0.714695326373367,0,0,0,0,0,0,0.328370082997356,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,3.54427271986794,2.80660409274515,4.256491644021,0,0,0.248385611765534,0.138348634936231,0.124980407962107,0,0,0.235265819698172,0,1.1593682288866,0.298509605773748,0.233713309847224,0,0,0,0,0,0.453692771289717,0,0.147855149989634,0,0.449803112163605,0.155262956876259,0.829412415681711,0.797525143673985,1.5652351854352,0.300515217994437,0,0,0,0.429642228169954,0.928067519756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| ||
|short_description=p9@PRDM8 | |short_description=p9@PRDM8 | ||
}} | }} |
Latest revision as of 22:15, 18 September 2015
Short description: | p9@PRDM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRDM8_5end |
Coexpression cluster: | C4432_carcinosarcoma_neuroblastoma_temporal_duodenum_parietal_Neurons_occipital |
Association with transcript: | 56bp_to_ENST00000509375_5end |
EntrezGene: | PRDM8 |
HGNC: | 13993 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.14e-07 | 8 |