FFCP PHASE1:Hg19::chr1:65991324..65991417,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6554 | |||
|TSSclassifier=strong | |||
|UniProt=P48357,Q4G138 | |||
|association_with_transcript=0bp_to_ENST00000462765,NM_001198687,NM_001198688,NM_001198689_5end | |||
|cluster_id=chr1:65991324..65991417,+ | |||
|coexpression_cluster_id=C2597 | |||
|description=CAGE_peak_2_at_LEPR_5end | |||
|id=chr1:65991324..65991417,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.97e-36!115;UBERON:0000477!5.79e-14!286;UBERON:0000153!1.13e-12!129;UBERON:0007811!1.13e-12!129;UBERON:0001049!1.44e-12!57;UBERON:0005068!1.44e-12!57;UBERON:0006241!1.44e-12!57;UBERON:0007135!1.44e-12!57;UBERON:0000033!4.51e-12!123;UBERON:0003075!4.66e-12!86;UBERON:0007284!4.66e-12!86;UBERON:0002616!5.24e-12!59;UBERON:0004111!8.61e-11!241;UBERON:0002346!1.43e-10!90;UBERON:0003080!6.48e-10!42;UBERON:0002780!2.32e-09!41;UBERON:0001890!2.32e-09!41;UBERON:0006240!2.32e-09!41;UBERON:0004121!2.72e-09!169;UBERON:0000955!3.17e-09!69;UBERON:0006238!3.17e-09!69;UBERON:0000475!5.29e-09!365;UBERON:0001017!1.45e-08!82;UBERON:0000481!1.48e-08!347;UBERON:0000924!1.94e-08!173;UBERON:0006601!1.94e-08!173;UBERON:0005743!4.69e-08!86;UBERON:0003056!5.72e-08!61;UBERON:0000073!6.26e-08!94;UBERON:0001016!6.26e-08!94;UBERON:0000468!1.07e-07!659;UBERON:0001893!6.56e-07!34;UBERON:0000078!7.22e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.56e-12;114!UBERON:0002780;7.74e-08;41!UBERON:0001890;7.74e-08;41!UBERON:0000165;5.10e-07;28!UBERON:0000073;6.45e-07;53!UBERON:0002616;6.45e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.08e-41,114;UBERON:0001049,2.73e-12,56;UBERON:0005068,2.73e-12,56;UBERON:0006241,2.73e-12,56;UBERON:0007135,2.73e-12,56;UBERON:0010314,1.01e-11,132;UBERON:0003075,7.46e-11,82;UBERON:0007284,7.46e-11,82;UBERON:0011216,7.89e-11,223;UBERON:0000073,1.02e-10,53;UBERON:0002616,1.02e-10,53;UBERON:0002780,1.81e-10,41;UBERON:0001890,1.81e-10,41;UBERON:0003080,1.81e-10,41;UBERON:0006240,1.81e-10,41;UBERON:0004111,7.30e-10,240;UBERON:0002346,1.25e-09,86;UBERON:0004121,2.12e-08,171;UBERON:0000924,2.12e-08,171;UBERON:0006601,2.12e-08,171;UBERON:0000955,2.36e-08,68;UBERON:0006238,2.36e-08,68;UBERON:0001017,2.49e-08,81;UBERON:0003056,6.72e-08,61;UBERON:0001016,7.63e-08,89;UBERON:0001893,1.30e-07,34;UBERON:0000165,2.78e-07,29;UBERON:0000930,2.78e-07,29;UBERON:0001869,6.16e-07,32;UBERON:0002791,6.45e-07,32 | |||
|phase1_expression=2.54349730978779,6.20891519283851,3.24195129420734,8.00586386825043,8.93922188854576,5.23403114460221,0,0.631719873426831,20.3724789995874,0,0,0,0,48.8877094192184,120.628644764961,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8971910474006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,3.68737718685108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.6375105890716,0.670700859703636,9.71755470010831,0.722878304769133,1.50401373190767,23.1754430337318,0,0.973269740605272,0.567208902984407,1.33037638477538,1.49319135678314,9.69245158683074,0,0,0.324547393654683,0,0,0,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0.417989933073621,6.20200222006389,9.24992282985447,13.7235451233515,0.805658634218294,6.84244895146661,2.68468263302986,2.20597848207521,0,12.9484606011916,11.6755273765608,11.8242054507488,0,0.949265659568129,0.549605231791222,0,0,0,4.47274756525787,0.759783069987479,0.926864265692532,3.44203944898576,4.965357350777,7.28880880184999,0,0.49333509683432,7.46906484959439,4.04132016209064,0.490385709340376,1.05950199351452,0.576175924479999,2.34321431833797,0,0,1.49448680551801,0.117434498643765,0.161872944368132,0.140450806702248,80.232589303173,3.19369225010597,114.174988199221,212.652511453488,229.463710370501,0,0,0.673344455816265,3.25308151667107,43.7761302465009,50.0434487804155,82.7517048657353,196.361142990922,0.794025282120147,0.89694817844431,1.06778694409284,0.423863802319124,0,0.206105058476878,3.34932702059318,3.7223371266318,0.168776332241266,0.0974370051611986,0.252433774244115,1.74894807420369,19.720818931895,1.06502877754984,0.302256294682921,0.67824236924195,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,0,8.35862270457562,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,93.7987257681548,52.0898424839142,207.958047151854,0,0,0.514703430895577,0,0,0,0,1.3032332212413,0,1.44331342025273,0.231860809950154,2.34817388471643,29.1620224477369,6.94478268864916,73.4381027625549,0,0,0,0,0,0,0,0,0,0,0.383382679165211,21.1845192295256,0,5.59785911960085,3.60299883542404,3.1560608356595,0,0,0,3.4214489204541,0,0,0,0.336393253036082,1.74384027533312,0.1466765716419,0,0,0,3.98907174877306,4.16029747645464,1.54324424557285,2.83698264046557,0,1.00084595560703,0,0,0.977208552881205,0,0,0,0,0.099972991182057,0,0,0,7.90762023122223,60.8768259920804,0,3.32997005335432,52.8074148954485,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,345.131166205941,115.539390364785,87.8898676787143,178.646970054963,89.392923387378,208.955699919963,397.460821070276,12.3387900888365,4.5481500811197,10.3473071292505,0,2.02806085395873,4.95236602468072,0.195801157462741,0.343143423810856,0,0,0,0,0,1.81434175997808,0.248107807818777,0.61384789315225,1.12264037773229,1.15325234330131,1.02341449813341,3.69964018630297,0,0,0,0,0,0,0,0,0,0,0.182091168006717,4.19598127870157,0,0,0,0,0,1.13733384070897,0.340187410553031,1.51141141271498,0,0,0,0,0,0,17.7600500083207,14.6403852573944,0,0,0,57.5999255110767,0,0,0,0,4.82051789532479,0.096670718292122,1.3864375540318,0.614014698904518,0.275673144969061,2.36324538710202,3.62541734785571,0.426133137080504,0.534192213880424,0,0,0,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0,1.71749864090389,0.744316738719335,7.2767267685307,3.62197368455267,1.02359116524534,1.71175595213568,0,0,3.41757669408298,3.29444435683266,1.7671860351853,0,3.17020642346017,0,0,1.21856744815642,0,0.818999468447914,0.282810863907425,0,0,0,3.06915619677634,0,1.9676842561399,0,0.92947049429925,0,0,0,0,0,1.68886108238131,19.7576935775941,0.75894634753143,2.0996083214699,0,0,0,52.6263846342195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.5444133963047,0.338583555603207,0,0,0,0,0,0,0,0,0,203.094208263725,9.19549306818343,0,4.22961015263549,0,25.3459150140377,0,0,0,0.23874448473769,0,0,5.96488588659779,1.82870241333667,0,0,0.844501632511974,32.6766700731754,3.86797481743607,0,0,0,0,0,0,0,24.0689909754118,0,230.053569599398,7.75466196876175,6.77207116581514,0,0,0,54.3749681576095,0,0,0,0,0,0.173624994933292,2.65722415744152,1.32656082487949,0,2.21158519862449,2.06883333267483,40.3669130763309,0,0,15.159200925248,0,0,0,0.54323685961004,0.638002319463839,9.34295452698996,3.19820865611181,0,0,49.0324461605461,41.0584102323269,45.0943828930801,35.242533264927,97.7231723529553,58.0118513278382,0,0.326465616318295,0,0,9.95261931078505,15.391616223581,5.49927130440263,0,0,0,4.71807930864739,8.02577647298789,4.68528891450678,0,0,0,7.49710365413842,7.25944296291983,3.0607276163049,423.918762727526,1.80388103297391,1.34794648816421,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,12.0561401087001,0,0,0,0,15.7122206711239,0,64.1785303816712,0,0,3.98858014522036,0,0,16.0089746054514,0,0,0,9.95250987599394,0,0,0,0,0,0,0,5.4037825983881,1.77976992559591,0,0.859530882839914,0,59.7664338722624,8.93725653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| |||
|short_description=p2@LEPR | |||
}} |
Latest revision as of 23:31, 18 September 2015
Short description: | p2@LEPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LEPR_5end |
Coexpression cluster: | C2597_liver_dura_Olfactory_Nucleus_bone_Fibroblast_Hepatocyte |
Association with transcript: | 0bp_to_ENST00000462765, NM_001198687, NM_001198688, NM_001198689_5end |
EntrezGene: | LEPR |
HGNC: | 6554 |
UniProt: | P48357Q4G138 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.08e-41 | 114 |
neural tube | 2.73e-12 | 56 |
neural rod | 2.73e-12 | 56 |
future spinal cord | 2.73e-12 | 56 |
neural keel | 2.73e-12 | 56 |
structure with developmental contribution from neural crest | 1.01e-11 | 132 |
neural plate | 7.46e-11 | 82 |
presumptive neural plate | 7.46e-11 | 82 |
organ system subdivision | 7.89e-11 | 223 |
regional part of nervous system | 1.02e-10 | 53 |
regional part of brain | 1.02e-10 | 53 |
regional part of forebrain | 1.81e-10 | 41 |
forebrain | 1.81e-10 | 41 |
anterior neural tube | 1.81e-10 | 41 |
future forebrain | 1.81e-10 | 41 |
anatomical conduit | 7.30e-10 | 240 |
neurectoderm | 1.25e-09 | 86 |
ectoderm-derived structure | 2.12e-08 | 171 |
ectoderm | 2.12e-08 | 171 |
presumptive ectoderm | 2.12e-08 | 171 |
brain | 2.36e-08 | 68 |
future brain | 2.36e-08 | 68 |
central nervous system | 2.49e-08 | 81 |
pre-chordal neural plate | 6.72e-08 | 61 |
nervous system | 7.63e-08 | 89 |
telencephalon | 1.30e-07 | 34 |
mouth | 2.78e-07 | 29 |
stomodeum | 2.78e-07 | 29 |
cerebral hemisphere | 6.16e-07 | 32 |
regional part of telencephalon | 6.45e-07 | 32 |