FFCP PHASE1:Hg19::chr11:63448936..63448947,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10313 | |EntrezGene=10313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10469 | |HGNC=10469 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000538995_5end | |association_with_transcript=0bp_to_ENST00000538995_5end | ||
|cluster_id=chr11:63448936..63448947,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_RTN3_5end | |description=CAGE_peak_3_at_RTN3_5end | ||
|id=chr11:63448936..63448947,+ | |id=chr11:63448936..63448947,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.25e-10;82 | |||
|ontology_enrichment_disease=DOID:162!1.41e-10!235;DOID:305!2.81e-10!106;DOID:14566!4.53e-10!239;DOID:0050687!9.14e-10!143 | |ontology_enrichment_disease=DOID:162!1.41e-10!235;DOID:305!2.81e-10!106;DOID:14566!4.53e-10!239;DOID:0050687!9.14e-10!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.38e-10,235;DOID:305,2.83e-10,106;DOID:14566,4.44e-10,239;DOID:0050687,8.92e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.19e-33!94;UBERON:0001016!7.19e-33!94;UBERON:0001017!2.68e-32!82;UBERON:0005743!2.73e-32!86;UBERON:0001049!1.58e-29!57;UBERON:0005068!1.58e-29!57;UBERON:0006241!1.58e-29!57;UBERON:0007135!1.58e-29!57;UBERON:0000955!5.65e-26!69;UBERON:0006238!5.65e-26!69;UBERON:0002616!1.36e-24!59;UBERON:0007023!3.85e-24!115;UBERON:0003080!3.38e-23!42;UBERON:0002346!4.64e-23!90;UBERON:0002780!4.65e-23!41;UBERON:0001890!4.65e-23!41;UBERON:0006240!4.65e-23!41;UBERON:0003075!3.15e-22!86;UBERON:0007284!3.15e-22!86;UBERON:0001893!3.51e-19!34;UBERON:0002020!4.08e-19!34;UBERON:0003528!4.08e-19!34;UBERON:0002791!1.63e-18!33;UBERON:0001869!3.59e-18!32;UBERON:0003056!7.54e-18!61;UBERON:0000924!1.42e-16!173;UBERON:0006601!1.42e-16!173;UBERON:0004121!8.91e-16!169;UBERON:0002619!6.03e-15!22;UBERON:0000956!3.15e-14!25;UBERON:0000203!3.15e-14!25;UBERON:0001950!8.74e-14!20;UBERON:0000033!7.51e-13!123;UBERON:0000153!1.38e-12!129;UBERON:0007811!1.38e-12!129;UBERON:0003076!1.63e-07!15;UBERON:0003057!1.63e-07!15 | |ontology_enrichment_uberon=UBERON:0000073!7.19e-33!94;UBERON:0001016!7.19e-33!94;UBERON:0001017!2.68e-32!82;UBERON:0005743!2.73e-32!86;UBERON:0001049!1.58e-29!57;UBERON:0005068!1.58e-29!57;UBERON:0006241!1.58e-29!57;UBERON:0007135!1.58e-29!57;UBERON:0000955!5.65e-26!69;UBERON:0006238!5.65e-26!69;UBERON:0002616!1.36e-24!59;UBERON:0007023!3.85e-24!115;UBERON:0003080!3.38e-23!42;UBERON:0002346!4.64e-23!90;UBERON:0002780!4.65e-23!41;UBERON:0001890!4.65e-23!41;UBERON:0006240!4.65e-23!41;UBERON:0003075!3.15e-22!86;UBERON:0007284!3.15e-22!86;UBERON:0001893!3.51e-19!34;UBERON:0002020!4.08e-19!34;UBERON:0003528!4.08e-19!34;UBERON:0002791!1.63e-18!33;UBERON:0001869!3.59e-18!32;UBERON:0003056!7.54e-18!61;UBERON:0000924!1.42e-16!173;UBERON:0006601!1.42e-16!173;UBERON:0004121!8.91e-16!169;UBERON:0002619!6.03e-15!22;UBERON:0000956!3.15e-14!25;UBERON:0000203!3.15e-14!25;UBERON:0001950!8.74e-14!20;UBERON:0000033!7.51e-13!123;UBERON:0000153!1.38e-12!129;UBERON:0007811!1.38e-12!129;UBERON:0003076!1.63e-07!15;UBERON:0003057!1.63e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.88e-17;41!UBERON:0001890;5.88e-17;41!UBERON:0001893;7.95e-17;34!UBERON:0001869;9.77e-17;32!UBERON:0003528;1.01e-16;34!UBERON:0002020;1.01e-16;34!UBERON:0002791;1.49e-16;32!UBERON:0000073;3.37e-16;53!UBERON:0002616;3.37e-16;53!UBERON:0002619;4.01e-15;22!UBERON:0000956;1.64e-14;25!UBERON:0000203;1.64e-14;25!UBERON:0001950;5.99e-14;20!UBERON:0000955;3.39e-12;68!UBERON:0001017;9.32e-12;75!UBERON:0001016;2.20e-11;83!UBERON:0007023;1.83e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.38e-32,89;UBERON:0001017,4.33e-32,81;UBERON:0001049,2.27e-29,56;UBERON:0005068,2.27e-29,56;UBERON:0006241,2.27e-29,56;UBERON:0007135,2.27e-29,56;UBERON:0000073,9.82e-28,53;UBERON:0002616,9.82e-28,53;UBERON:0000955,9.00e-26,68;UBERON:0006238,9.00e-26,68;UBERON:0007023,1.37e-23,114;UBERON:0002780,4.64e-23,41;UBERON:0001890,4.64e-23,41;UBERON:0003080,4.64e-23,41;UBERON:0006240,4.64e-23,41;UBERON:0002346,4.57e-22,86;UBERON:0003075,3.04e-21,82;UBERON:0007284,3.04e-21,82;UBERON:0001893,3.50e-19,34;UBERON:0003528,4.07e-19,34;UBERON:0002020,4.07e-19,34;UBERON:0011216,1.57e-18,223;UBERON:0001869,3.58e-18,32;UBERON:0002791,5.79e-18,32;UBERON:0003056,6.59e-18,61;UBERON:0004121,4.07e-16,171;UBERON:0000924,4.07e-16,171;UBERON:0006601,4.07e-16,171;UBERON:0010371,1.34e-15,104;UBERON:0002619,6.02e-15,22;UBERON:0000956,3.14e-14,25;UBERON:0000203,3.14e-14,25;UBERON:0001950,8.73e-14,20;UBERON:0003076,1.63e-07,15;UBERON:0003057,1.63e-07,15;UBERON:0010314,6.40e-07,132 | |||
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| ||
|short_description=p3@RTN3 | |short_description=p3@RTN3 | ||
}} | }} |
Latest revision as of 00:04, 19 September 2015
Short description: | p3@RTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RTN3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000538995_5end |
EntrezGene: | RTN3 |
HGNC: | 10469 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 1.38e-10 | 235 |
carcinoma | 2.83e-10 | 106 |
disease of cellular proliferation | 4.44e-10 | 239 |
cell type cancer | 8.92e-10 | 143 |