FFCP PHASE1:Hg19::chr7:54614634..54614654,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222008 | |EntrezGene=222008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |HGNC=28499 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000469952_5end | |association_with_transcript=-31bp_to_ENST00000469952_5end | ||
|cluster_id=chr7:54614634..54614654,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_21_at_VSTM2A_5end | |description=CAGE_peak_21_at_VSTM2A_5end | ||
|id=chr7:54614634..54614654,+ | |id=chr7:54614634..54614654,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.99e-58!32;UBERON:0002020!9.51e-55!34;UBERON:0003528!9.51e-55!34;UBERON:0001893!1.17e-54!34;UBERON:0002780!1.65e-54!41;UBERON:0001890!1.65e-54!41;UBERON:0006240!1.65e-54!41;UBERON:0003080!4.01e-53!42;UBERON:0001950!3.43e-52!20;UBERON:0002791!8.68e-51!33;UBERON:0001049!1.26e-49!57;UBERON:0005068!1.26e-49!57;UBERON:0006241!1.26e-49!57;UBERON:0007135!1.26e-49!57;UBERON:0002616!8.73e-48!59;UBERON:0002619!2.32e-47!22;UBERON:0000955!6.77e-47!69;UBERON:0006238!6.77e-47!69;UBERON:0000073!4.64e-44!94;UBERON:0001016!4.64e-44!94;UBERON:0005743!9.95e-43!86;UBERON:0001017!7.32e-42!82;UBERON:0000956!1.65e-41!25;UBERON:0000203!1.65e-41!25;UBERON:0007023!6.31e-39!115;UBERON:0003056!1.13e-38!61;UBERON:0003075!8.15e-37!86;UBERON:0007284!8.15e-37!86;UBERON:0002346!6.18e-35!90;UBERON:0000033!1.45e-30!123;UBERON:0000153!7.17e-29!129;UBERON:0007811!7.17e-29!129;UBERON:0004121!1.03e-23!169;UBERON:0001871!4.20e-23!7;UBERON:0000924!5.08e-23!173;UBERON:0006601!5.08e-23!173;UBERON:0000200!3.96e-21!6;UBERON:0002420!1.23e-20!9;UBERON:0007245!1.23e-20!9;UBERON:0010009!1.23e-20!9;UBERON:0010011!1.23e-20!9;UBERON:0000454!1.23e-20!9;UBERON:0001872!8.26e-17!5;UBERON:0002771!3.78e-16!3;UBERON:0002308!2.11e-14!9;UBERON:0000125!2.11e-14!9;UBERON:0000369!1.87e-12!4;UBERON:0002435!1.87e-12!4;UBERON:0000204!1.87e-12!4;UBERON:0010082!1.87e-12!4;UBERON:0009663!3.14e-12!7;UBERON:0000025!5.99e-12!194;UBERON:0001876!1.06e-11!2;UBERON:0000349!4.83e-10!5;UBERON:0002021!6.35e-10!5;UBERON:0000064!6.58e-10!219;UBERON:0004111!1.91e-09!241;UBERON:0005383!4.35e-08!3;UBERON:0005382!4.35e-08!3;UBERON:0000477!6.97e-08!286;UBERON:0000988!1.58e-07!3;UBERON:0000475!7.39e-07!365;UBERON:0000483!8.20e-07!309;UBERON:0001874!8.81e-07!1;UBERON:0003112!9.81e-07!1;UBERON:0000032!9.81e-07!1;UBERON:0005253!9.81e-07!1;UBERON:0003128!9.81e-07!1;UBERON:0002241!9.81e-07!1;UBERON:0001703!9.81e-07!1;UBERON:0004761!9.81e-07!1;UBERON:0009617!9.81e-07!1 | |ontology_enrichment_uberon=UBERON:0001869!2.99e-58!32;UBERON:0002020!9.51e-55!34;UBERON:0003528!9.51e-55!34;UBERON:0001893!1.17e-54!34;UBERON:0002780!1.65e-54!41;UBERON:0001890!1.65e-54!41;UBERON:0006240!1.65e-54!41;UBERON:0003080!4.01e-53!42;UBERON:0001950!3.43e-52!20;UBERON:0002791!8.68e-51!33;UBERON:0001049!1.26e-49!57;UBERON:0005068!1.26e-49!57;UBERON:0006241!1.26e-49!57;UBERON:0007135!1.26e-49!57;UBERON:0002616!8.73e-48!59;UBERON:0002619!2.32e-47!22;UBERON:0000955!6.77e-47!69;UBERON:0006238!6.77e-47!69;UBERON:0000073!4.64e-44!94;UBERON:0001016!4.64e-44!94;UBERON:0005743!9.95e-43!86;UBERON:0001017!7.32e-42!82;UBERON:0000956!1.65e-41!25;UBERON:0000203!1.65e-41!25;UBERON:0007023!6.31e-39!115;UBERON:0003056!1.13e-38!61;UBERON:0003075!8.15e-37!86;UBERON:0007284!8.15e-37!86;UBERON:0002346!6.18e-35!90;UBERON:0000033!1.45e-30!123;UBERON:0000153!7.17e-29!129;UBERON:0007811!7.17e-29!129;UBERON:0004121!1.03e-23!169;UBERON:0001871!4.20e-23!7;UBERON:0000924!5.08e-23!173;UBERON:0006601!5.08e-23!173;UBERON:0000200!3.96e-21!6;UBERON:0002420!1.23e-20!9;UBERON:0007245!1.23e-20!9;UBERON:0010009!1.23e-20!9;UBERON:0010011!1.23e-20!9;UBERON:0000454!1.23e-20!9;UBERON:0001872!8.26e-17!5;UBERON:0002771!3.78e-16!3;UBERON:0002308!2.11e-14!9;UBERON:0000125!2.11e-14!9;UBERON:0000369!1.87e-12!4;UBERON:0002435!1.87e-12!4;UBERON:0000204!1.87e-12!4;UBERON:0010082!1.87e-12!4;UBERON:0009663!3.14e-12!7;UBERON:0000025!5.99e-12!194;UBERON:0001876!1.06e-11!2;UBERON:0000349!4.83e-10!5;UBERON:0002021!6.35e-10!5;UBERON:0000064!6.58e-10!219;UBERON:0004111!1.91e-09!241;UBERON:0005383!4.35e-08!3;UBERON:0005382!4.35e-08!3;UBERON:0000477!6.97e-08!286;UBERON:0000988!1.58e-07!3;UBERON:0000475!7.39e-07!365;UBERON:0000483!8.20e-07!309;UBERON:0001874!8.81e-07!1;UBERON:0003112!9.81e-07!1;UBERON:0000032!9.81e-07!1;UBERON:0005253!9.81e-07!1;UBERON:0003128!9.81e-07!1;UBERON:0002241!9.81e-07!1;UBERON:0001703!9.81e-07!1;UBERON:0004761!9.81e-07!1;UBERON:0009617!9.81e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001874;2.21e-40;1!UBERON:0001871;1.28e-23;6!UBERON:0002771;3.11e-21;2!UBERON:0001876;5.69e-21;2!UBERON:0001893;3.60e-20;34!UBERON:0003528;8.76e-20;34!UBERON:0002020;8.76e-20;34!UBERON:0002420;1.61e-18;9!UBERON:0007245;1.61e-18;9!UBERON:0010009;1.61e-18;9!UBERON:0010011;1.61e-18;9!UBERON:0000454;1.61e-18;9!UBERON:0002791;2.30e-18;32!UBERON:0001869;2.30e-18;32!UBERON:0001950;9.30e-18;20!UBERON:0002619;2.71e-16;22!UBERON:0000956;1.62e-14;25!UBERON:0000203;1.62e-14;25!UBERON:0005383;1.83e-14;3!UBERON:0005382;1.83e-14;3!UBERON:0000955;5.37e-13;68!UBERON:0001017;2.41e-12;75!UBERON:0000369;3.42e-11;4!UBERON:0002435;3.42e-11;4!UBERON:0000204;3.42e-11;4!UBERON:0001872;3.22e-09;5!UBERON:0000349;3.22e-09;5!UBERON:0000200;5.54e-08;6!UBERON:0000073;1.10e-07;53!UBERON:0002616;1.10e-07;53!UBERON:0009663;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,2.21e-40,1;UBERON:0001871,1.14e-23,6;UBERON:0002771,3.11e-21,2;UBERON:0001876,4.66e-21,2;UBERON:0002791,8.18e-20,32;UBERON:0001869,8.18e-20,32;UBERON:0003528,9.96e-19,34;UBERON:0002020,9.96e-19,34;UBERON:0001893,9.96e-19,34;UBERON:0002420,1.48e-18,9;UBERON:0007245,1.48e-18,9;UBERON:0010009,1.48e-18,9;UBERON:0010011,1.48e-18,9;UBERON:0000454,1.48e-18,9;UBERON:0001950,9.30e-18,20;UBERON:0002619,2.71e-16,22;UBERON:0002780,9.75e-16,41;UBERON:0001890,9.75e-16,41;UBERON:0003080,9.75e-16,41;UBERON:0006240,9.75e-16,41;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0000956,1.62e-14,25;UBERON:0000203,1.62e-14,25;UBERON:0005383,1.83e-14,3;UBERON:0005382,1.83e-14,3;UBERON:0001017,1.45e-12,81;UBERON:0000073,2.11e-12,53;UBERON:0002616,2.11e-12,53;UBERON:0001049,8.70e-12,56;UBERON:0005068,8.70e-12,56;UBERON:0006241,8.70e-12,56;UBERON:0007135,8.70e-12,56;UBERON:0001016,2.13e-11,89;UBERON:0000369,3.42e-11,4;UBERON:0002435,3.42e-11,4;UBERON:0000204,3.42e-11,4;UBERON:0010082,3.42e-11,4;UBERON:0003056,6.84e-11,61;UBERON:0007023,2.58e-09,114;UBERON:0000349,2.97e-09,5;UBERON:0001872,3.49e-09,5;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0000200,5.54e-08,6;UBERON:0002346,6.09e-08,86;UBERON:0009663,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0.649376687132959,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.60298219312704,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73523445039227,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.798169295285756,0.205116364240755,0,0.760729777106397,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,1.56215619722769,0.620060389503552,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0,1.57115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,1.9882952955326,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0.649376687132959,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.60298219312704,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73523445039227,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.798169295285756,0.205116364240755,0,0.760729777106397,0.807378228159255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405225507710368,1.56215619722769,0.620060389503552,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.263091094251396,0,0,0,1.57115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611923411718232,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p21@VSTM2A | |short_description=p21@VSTM2A | ||
}} | }} |
Latest revision as of 00:12, 19 September 2015
Short description: | p21@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_VSTM2A_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -31bp_to_ENST00000469952_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data