FFCP PHASE1:Hg19::chr4:83601974..83601985,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79966 | |EntrezGene=79966 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=21088 | |HGNC=21088 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SK9 | |UniProt=Q86SK9 | ||
|association_with_transcript=-55bp_to_AL831891_5end | |association_with_transcript=-55bp_to_AL831891_5end | ||
|cluster_id=chr4:83601974..83601985,- | |||
|description=CAGE_peak_9_at_SCD5_5end | |description=CAGE_peak_9_at_SCD5_5end | ||
|id=chr4:83601974..83601985,- | |id=chr4:83601974..83601985,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002231;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,1.41e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0006222;6.72e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.93e-41!57;UBERON:0005068!4.93e-41!57;UBERON:0006241!4.93e-41!57;UBERON:0007135!4.93e-41!57;UBERON:0002616!8.31e-33!59;UBERON:0001017!8.62e-33!82;UBERON:0000955!3.45e-32!69;UBERON:0006238!3.45e-32!69;UBERON:0005743!4.11e-32!86;UBERON:0000073!4.45e-30!94;UBERON:0001016!4.45e-30!94;UBERON:0002020!2.23e-29!34;UBERON:0003528!2.23e-29!34;UBERON:0002780!2.95e-29!41;UBERON:0001890!2.95e-29!41;UBERON:0006240!2.95e-29!41;UBERON:0001893!3.32e-29!34;UBERON:0003080!2.53e-28!42;UBERON:0002791!8.09e-28!33;UBERON:0002346!3.52e-27!90;UBERON:0001869!1.60e-26!32;UBERON:0003075!2.57e-26!86;UBERON:0007284!2.57e-26!86;UBERON:0007023!1.56e-23!115;UBERON:0000033!2.21e-21!123;UBERON:0000153!2.22e-21!129;UBERON:0007811!2.22e-21!129;UBERON:0003056!4.44e-19!61;UBERON:0002619!1.56e-18!22;UBERON:0001950!3.45e-18!20;UBERON:0000924!4.25e-18!173;UBERON:0006601!4.25e-18!173;UBERON:0000956!1.07e-17!25;UBERON:0000203!1.07e-17!25;UBERON:0004121!2.99e-17!169;UBERON:0002308!4.40e-14!9;UBERON:0000125!4.40e-14!9;UBERON:0004111!4.79e-14!241;UBERON:0003076!1.06e-13!15;UBERON:0003057!1.06e-13!15;UBERON:0000025!1.29e-13!194;UBERON:0000477!5.90e-12!286;UBERON:0009663!4.97e-11!7;UBERON:0002420!5.94e-11!9;UBERON:0007245!5.94e-11!9;UBERON:0010009!5.94e-11!9;UBERON:0010011!5.94e-11!9;UBERON:0000454!5.94e-11!9;UBERON:0000200!7.49e-10!6;UBERON:0004733!7.75e-10!12;UBERON:0002028!7.75e-10!12;UBERON:0007277!7.75e-10!12;UBERON:0002298!1.13e-09!8;UBERON:0004732!6.60e-09!13;UBERON:0000119!1.36e-08!312;UBERON:0000483!1.95e-08!309;UBERON:0000475!4.95e-08!365;UBERON:0000064!1.31e-07!219;UBERON:0001871!2.72e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!4.93e-41!57;UBERON:0005068!4.93e-41!57;UBERON:0006241!4.93e-41!57;UBERON:0007135!4.93e-41!57;UBERON:0002616!8.31e-33!59;UBERON:0001017!8.62e-33!82;UBERON:0000955!3.45e-32!69;UBERON:0006238!3.45e-32!69;UBERON:0005743!4.11e-32!86;UBERON:0000073!4.45e-30!94;UBERON:0001016!4.45e-30!94;UBERON:0002020!2.23e-29!34;UBERON:0003528!2.23e-29!34;UBERON:0002780!2.95e-29!41;UBERON:0001890!2.95e-29!41;UBERON:0006240!2.95e-29!41;UBERON:0001893!3.32e-29!34;UBERON:0003080!2.53e-28!42;UBERON:0002791!8.09e-28!33;UBERON:0002346!3.52e-27!90;UBERON:0001869!1.60e-26!32;UBERON:0003075!2.57e-26!86;UBERON:0007284!2.57e-26!86;UBERON:0007023!1.56e-23!115;UBERON:0000033!2.21e-21!123;UBERON:0000153!2.22e-21!129;UBERON:0007811!2.22e-21!129;UBERON:0003056!4.44e-19!61;UBERON:0002619!1.56e-18!22;UBERON:0001950!3.45e-18!20;UBERON:0000924!4.25e-18!173;UBERON:0006601!4.25e-18!173;UBERON:0000956!1.07e-17!25;UBERON:0000203!1.07e-17!25;UBERON:0004121!2.99e-17!169;UBERON:0002308!4.40e-14!9;UBERON:0000125!4.40e-14!9;UBERON:0004111!4.79e-14!241;UBERON:0003076!1.06e-13!15;UBERON:0003057!1.06e-13!15;UBERON:0000025!1.29e-13!194;UBERON:0000477!5.90e-12!286;UBERON:0009663!4.97e-11!7;UBERON:0002420!5.94e-11!9;UBERON:0007245!5.94e-11!9;UBERON:0010009!5.94e-11!9;UBERON:0010011!5.94e-11!9;UBERON:0000454!5.94e-11!9;UBERON:0000200!7.49e-10!6;UBERON:0004733!7.75e-10!12;UBERON:0002028!7.75e-10!12;UBERON:0007277!7.75e-10!12;UBERON:0002298!1.13e-09!8;UBERON:0004732!6.60e-09!13;UBERON:0000119!1.36e-08!312;UBERON:0000483!1.95e-08!309;UBERON:0000475!4.95e-08!365;UBERON:0000064!1.31e-07!219;UBERON:0001871!2.72e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000200;1.50e-17;6!UBERON:0002780;1.03e-15;41!UBERON:0001890;1.03e-15;41!UBERON:0001894;4.37e-15;7!UBERON:0002771;7.30e-14;2!UBERON:0001897;1.14e-13;2!UBERON:0002702;1.14e-13;2!UBERON:0001875;1.14e-13;2!UBERON:0006514;1.14e-13;2!UBERON:0010225;1.14e-13;2!UBERON:0002791;1.51e-12;32!UBERON:0001869;1.51e-12;32!UBERON:0001017;1.76e-12;75!UBERON:0000955;1.42e-11;68!UBERON:0001950;2.52e-11;20!UBERON:0000073;3.38e-11;53!UBERON:0002616;3.38e-11;53!UBERON:0001893;6.86e-11;34!UBERON:0002619;2.12e-10;22!UBERON:0001870;1.47e-09;3!UBERON:0000956;2.82e-09;25!UBERON:0000203;2.82e-09;25!UBERON:0003528;5.36e-09;34!UBERON:0002020;5.36e-09;34!UBERON:0002784;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.92e-21,41;UBERON:0001890,2.92e-21,41;UBERON:0003080,2.92e-21,41;UBERON:0006240,2.92e-21,41;UBERON:0000200,1.22e-17,6;UBERON:0000955,2.33e-17,68;UBERON:0006238,2.33e-17,68;UBERON:0000073,1.39e-16,53;UBERON:0002616,1.39e-16,53;UBERON:0001049,1.02e-15,56;UBERON:0005068,1.02e-15,56;UBERON:0006241,1.02e-15,56;UBERON:0007135,1.02e-15,56;UBERON:0001894,5.04e-15,7;UBERON:0006222,5.04e-15,7;UBERON:0001017,1.18e-14,81;UBERON:0003056,1.83e-14,61;UBERON:0002771,7.30e-14,2;UBERON:0002702,8.28e-14,2;UBERON:0001875,9.40e-14,2;UBERON:0006514,9.40e-14,2;UBERON:0001897,1.37e-13,2;UBERON:0010225,1.37e-13,2;UBERON:0001016,3.18e-13,89;UBERON:0002791,1.77e-12,32;UBERON:0001869,1.77e-12,32;UBERON:0003528,8.60e-12,34;UBERON:0002020,8.60e-12,34;UBERON:0001893,8.60e-12,34;UBERON:0001950,2.52e-11,20;UBERON:0003075,7.81e-11,82;UBERON:0007284,7.81e-11,82;UBERON:0007023,1.13e-10,114;UBERON:0002619,2.12e-10,22;UBERON:0002346,2.44e-10,86;UBERON:0001870,1.19e-09,3;UBERON:0000956,2.82e-09,25;UBERON:0000203,2.82e-09,25;UBERON:0010371,1.42e-08,104;UBERON:0002784,1.92e-07,4;UBERON:0004121,5.82e-07,171;UBERON:0000924,5.82e-07,171;UBERON:0006601,5.82e-07,171;UBERON:0011216,6.23e-07,223;UBERON:0010314,9.12e-07,132 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0,0.601892199455438,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0,1.20303882181971,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,0,0.844016498463076,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0,0,0,3.87733098438087,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0.995213339381022,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.471807930864739,0,1.1713222286267,0,0,0,0.394584402849391,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0.253243183823515,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,1.23214841002794,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.953423842781029,0,0,0,0,0,0.242998226632099,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.775697738169303,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.68457782784319,0.1251909307065,0.573409195690071,0.221858103073705,0.558867626472451,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,1.02558182120378,0.252071696221718,0.207471757392654,0.807378228159255,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.607838261565552,0,0.206686796501184,0.380494861163441,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.271878931907327,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,1.03432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0,0,0.601892199455438,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0,0,0,0,1.20303882181971,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0.307160702099232,0,0.844016498463076,0,0,0,0.19924798825107,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0,0,0,3.87733098438087,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0.995213339381022,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.471807930864739,0,1.1713222286267,0,0,0,0.394584402849391,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0,0,0.17472666824203,0,0,0,0,0,0,0.677942222341597,0,0,0.253243183823515,0.195551382734803,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0.600420288709789,1.23214841002794,0,0,0,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0.953423842781029,0,0,0,0,0,0.242998226632099,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.775697738169303,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.68457782784319,0.1251909307065,0.573409195690071,0.221858103073705,0.558867626472451,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0.800055529326307,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0.192914038270915,0,0.256241518587947,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,1.02558182120378,0.252071696221718,0.207471757392654,0.807378228159255,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.607838261565552,0,0.206686796501184,0.380494861163441,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.271878931907327,0.263091094251396,0,0,0,0.157115589916002,0,0,0,0,0.285906176706625,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0.655678681511872,0,0.245148321753905,0,0.981542335574726,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0.679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0,1.03432995861895,0,0,0.0645889098360061,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@SCD5 | |short_description=p9@SCD5 | ||
}} | }} |
Latest revision as of 01:08, 19 September 2015
Short description: | p9@SCD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SCD5_5end |
Coexpression cluster: | NA |
Association with transcript: | -55bp_to_AL831891_5end |
EntrezGene: | SCD5 |
HGNC: | 21088 |
UniProt: | Q86SK9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 1.41e-09 | 3 |