FFCP PHASE1:Hg19::chr1:182758900..182758918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80896 | |EntrezGene=80896 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16781 | |HGNC=16781 | ||
|TSSclassifier=strong | |||
|UniProt=A6NK93 | |UniProt=A6NK93 | ||
|association_with_transcript=0bp_to_ENST00000367551,ENST00000367554,ENST00000367555,ENST00000445965,ENST00000479721_5end | |association_with_transcript=0bp_to_ENST00000367551,ENST00000367554,ENST00000367555,ENST00000445965,ENST00000479721_5end | ||
|cluster_id=chr1:182758900..182758918,+ | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_1_at_NPL_5end | |description=CAGE_peak_1_at_NPL_5end | ||
|id=chr1:182758900..182758918,+ | |id=chr1:182758900..182758918,+ | ||
|ontology_enrichment_celltype=CL:0000763!2.96e-34!112;CL:0000049!2.96e-34!112;CL:0000766!8.06e-33!76;CL:0000839!1.97e-29!70;CL:0002194!3.63e-28!63;CL:0000576!3.63e-28!63;CL:0000040!3.63e-28!63;CL:0000559!3.63e-28!63;CL:0002009!8.03e-28!65;CL:0000557!1.43e-26!71;CL:0000037!2.35e-25!172;CL:0000566!2.35e-25!172;CL:0002057!2.57e-25!42;CL:0002032!8.83e-25!165;CL:0000837!8.83e-25!165;CL:0000860!1.22e-24!45;CL:0000738!9.78e-23!140;CL:0000988!8.26e-21!182;CL:0002031!7.74e-18!124;CL:0002087!1.87e-17!119 | |ontology_enrichment_celltype=CL:0000763!2.96e-34!112;CL:0000049!2.96e-34!112;CL:0000766!8.06e-33!76;CL:0000839!1.97e-29!70;CL:0002194!3.63e-28!63;CL:0000576!3.63e-28!63;CL:0000040!3.63e-28!63;CL:0000559!3.63e-28!63;CL:0002009!8.03e-28!65;CL:0000557!1.43e-26!71;CL:0000037!2.35e-25!172;CL:0000566!2.35e-25!172;CL:0002057!2.57e-25!42;CL:0002032!8.83e-25!165;CL:0000837!8.83e-25!165;CL:0000860!1.22e-24!45;CL:0000738!9.78e-23!140;CL:0000988!8.26e-21!182;CL:0002031!7.74e-18!124;CL:0002087!1.87e-17!119 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.02e-19;39!CL:0000234;1.02e-19;39!CL:0000860;2.56e-19;33!CL:0002057;2.56e-19;33!CL:0000576;2.28e-17;48!CL:0000766;6.19e-15;69!CL:0000763;9.73e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.19e-36,108;CL:0000049,9.19e-36,108;CL:0000766,6.51e-35,72;CL:0000839,1.89e-31,66;CL:0002194,2.74e-30,59;CL:0000576,2.74e-30,59;CL:0000040,2.74e-30,59;CL:0000559,2.74e-30,59;CL:0002009,7.39e-30,61;CL:0000473,7.61e-30,48;CL:0000234,7.61e-30,48;CL:0000557,1.58e-28,67;CL:0000037,4.36e-26,168;CL:0000860,1.31e-25,42;CL:0002057,1.31e-25,42;CL:0002032,1.61e-25,161;CL:0000837,1.61e-25,161;CL:0000738,1.50e-23,136;CL:0000988,7.05e-22,177;CL:0002031,1.55e-18,120;CL:0002087,3.68e-18,115 | |||
|ontology_enrichment_development_v019=CL:0002057;8.82e-19;42!CL:0000049;3.89e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.63e-36!115;UBERON:0002390!3.33e-26!102;UBERON:0003061!3.33e-26!102;UBERON:0002193!1.40e-22!112;UBERON:0002371!1.48e-21!80;UBERON:0001474!3.62e-19!86;UBERON:0002405!1.67e-15!115;UBERON:0004765!6.75e-14!101;UBERON:0001434!6.75e-14!101;UBERON:0001049!2.17e-13!57;UBERON:0005068!2.17e-13!57;UBERON:0006241!2.17e-13!57;UBERON:0007135!2.17e-13!57;UBERON:0003080!2.33e-11!42;UBERON:0000955!4.03e-11!69;UBERON:0006238!4.03e-11!69;UBERON:0002780!4.23e-11!41;UBERON:0001890!4.23e-11!41;UBERON:0006240!4.23e-11!41;UBERON:0001017!6.17e-11!82;UBERON:0002616!1.70e-10!59;UBERON:0005743!4.63e-10!86;UBERON:0002020!2.22e-09!34;UBERON:0003528!2.22e-09!34;UBERON:0000073!2.36e-09!94;UBERON:0001016!2.36e-09!94;UBERON:0001893!2.73e-09!34;UBERON:0002791!5.87e-09!33;UBERON:0001869!1.64e-08!32;UBERON:0002619!5.49e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.54e-10;114!UBERON:0002780;1.49e-08;41!UBERON:0001890;1.49e-08;41!UBERON:0001893;3.10e-08;34!UBERON:0003528;4.36e-08;34!UBERON:0002020;4.36e-08;34!UBERON:0002791;7.49e-08;32!UBERON:0001869;8.26e-08;32!UBERON:0000073;2.20e-07;53!UBERON:0002616;2.20e-07;53!UBERON:0002619;4.02e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.65e-36,114;UBERON:0002390,4.65e-28,98;UBERON:0003061,4.65e-28,98;UBERON:0002193,1.43e-23,108;UBERON:0002371,5.12e-23,76;UBERON:0001474,1.64e-20,82;UBERON:0002405,4.42e-20,93;UBERON:0004765,4.62e-16,90;UBERON:0001434,4.63e-13,100;UBERON:0001049,6.94e-13,56;UBERON:0005068,6.94e-13,56;UBERON:0006241,6.94e-13,56;UBERON:0007135,6.94e-13,56;UBERON:0000073,9.97e-12,53;UBERON:0002616,9.97e-12,53;UBERON:0002780,4.40e-11,41;UBERON:0001890,4.40e-11,41;UBERON:0003080,4.40e-11,41;UBERON:0006240,4.40e-11,41;UBERON:0000955,1.13e-10,68;UBERON:0006238,1.13e-10,68;UBERON:0001017,1.64e-10,81;UBERON:0001016,9.75e-10,89;UBERON:0003528,2.41e-09,34;UBERON:0002020,2.41e-09,34;UBERON:0001893,2.98e-09,34;UBERON:0002791,1.68e-08,32;UBERON:0001869,1.82e-08,32;UBERON:0002619,4.71e-07,22 | |||
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| ||
|short_description=p1@NPL | |short_description=p1@NPL | ||
}} | }} |
Latest revision as of 01:32, 19 September 2015
Short description: | p1@NPL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPL_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000367551, ENST00000367554, ENST00000367555, ENST00000445965, ENST00000479721_5end |
EntrezGene: | NPL |
HGNC: | 16781 |
UniProt: | A6NK93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.19e-36 | 108 |
common myeloid progenitor | 9.19e-36 | 108 |
myeloid leukocyte | 6.51e-35 | 72 |
myeloid lineage restricted progenitor cell | 1.89e-31 | 66 |
monopoietic cell | 2.74e-30 | 59 |
monocyte | 2.74e-30 | 59 |
monoblast | 2.74e-30 | 59 |
promonocyte | 2.74e-30 | 59 |
macrophage dendritic cell progenitor | 7.39e-30 | 61 |
defensive cell | 7.61e-30 | 48 |
phagocyte | 7.61e-30 | 48 |
granulocyte monocyte progenitor cell | 1.58e-28 | 67 |
hematopoietic stem cell | 4.36e-26 | 168 |
classical monocyte | 1.31e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.31e-25 | 42 |
hematopoietic oligopotent progenitor cell | 1.61e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-25 | 161 |
leukocyte | 1.50e-23 | 136 |
hematopoietic cell | 7.05e-22 | 177 |
hematopoietic lineage restricted progenitor cell | 1.55e-18 | 120 |
nongranular leukocyte | 3.68e-18 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.65e-36 | 114 |
hematopoietic system | 4.65e-28 | 98 |
blood island | 4.65e-28 | 98 |
hemolymphoid system | 1.43e-23 | 108 |
bone marrow | 5.12e-23 | 76 |
bone element | 1.64e-20 | 82 |
immune system | 4.42e-20 | 93 |
skeletal element | 4.62e-16 | 90 |
skeletal system | 4.63e-13 | 100 |
neural tube | 6.94e-13 | 56 |
neural rod | 6.94e-13 | 56 |
future spinal cord | 6.94e-13 | 56 |
neural keel | 6.94e-13 | 56 |
regional part of nervous system | 9.97e-12 | 53 |
regional part of brain | 9.97e-12 | 53 |
regional part of forebrain | 4.40e-11 | 41 |
forebrain | 4.40e-11 | 41 |
anterior neural tube | 4.40e-11 | 41 |
future forebrain | 4.40e-11 | 41 |
brain | 1.13e-10 | 68 |
future brain | 1.13e-10 | 68 |
central nervous system | 1.64e-10 | 81 |
nervous system | 9.75e-10 | 89 |
brain grey matter | 2.41e-09 | 34 |
gray matter | 2.41e-09 | 34 |
telencephalon | 2.98e-09 | 34 |
regional part of telencephalon | 1.68e-08 | 32 |
cerebral hemisphere | 1.82e-08 | 32 |
regional part of cerebral cortex | 4.71e-07 | 22 |