FFCP PHASE1:Hg19::chr10:73724266..73724285,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9469 | |EntrezGene=9469 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1971 | |HGNC=1971 | ||
|TSSclassifier=strong | |||
|UniProt=Q7LGC8 | |UniProt=Q7LGC8 | ||
|association_with_transcript=143bp_to_ENST00000373115_5end | |association_with_transcript=143bp_to_ENST00000373115_5end | ||
|cluster_id=chr10:73724266..73724285,+ | |||
|description=CAGE_peak_3_at_CHST3_5end | |description=CAGE_peak_3_at_CHST3_5end | ||
|id=chr10:73724266..73724285,+ | |id=chr10:73724266..73724285,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.31e-09!180 | |ontology_enrichment_celltype=CL:0000055!6.31e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.48e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.96e-22!115;UBERON:0000475!1.65e-20!365;UBERON:0000119!3.68e-15!312;UBERON:0000483!5.39e-15!309;UBERON:0000477!7.58e-15!286;UBERON:0004111!7.92e-15!241;UBERON:0000481!2.16e-14!347;UBERON:0000468!9.16e-14!659;UBERON:0000025!9.99e-14!194;UBERON:0003075!1.09e-13!86;UBERON:0007284!1.09e-13!86;UBERON:0002346!2.86e-13!90;UBERON:0005743!6.41e-13!86;UBERON:0001049!6.73e-13!57;UBERON:0005068!6.73e-13!57;UBERON:0006241!6.73e-13!57;UBERON:0007135!6.73e-13!57;UBERON:0000073!2.61e-12!94;UBERON:0001016!2.61e-12!94;UBERON:0000467!1.86e-11!625;UBERON:0001017!3.05e-11!82;UBERON:0000480!3.10e-11!626;UBERON:0004121!6.26e-11!169;UBERON:0000924!8.37e-11!173;UBERON:0006601!8.37e-11!173;UBERON:0002616!2.16e-10!59;UBERON:0000062!3.14e-10!511;UBERON:0000955!8.33e-10!69;UBERON:0006238!8.33e-10!69;UBERON:0000064!1.54e-09!219;UBERON:0000033!3.64e-09!123;UBERON:0000153!1.13e-08!129;UBERON:0007811!1.13e-08!129;UBERON:0002050!3.61e-08!605;UBERON:0005423!3.61e-08!605;UBERON:0000922!4.58e-08!612;UBERON:0000923!4.73e-08!604;UBERON:0005291!4.73e-08!604;UBERON:0006598!4.73e-08!604;UBERON:0002532!4.73e-08!604;UBERON:0003080!9.65e-08!42;UBERON:0003056!1.29e-07!61;UBERON:0002780!2.69e-07!41;UBERON:0001890!2.69e-07!41;UBERON:0006240!2.69e-07!41;UBERON:0003103!3.06e-07!69;UBERON:0003076!4.31e-07!15;UBERON:0003057!4.31e-07!15;UBERON:0002100!6.26e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.22e-08;114!UBERON:0003688;6.93e-08;6!UBERON:0002358;6.93e-08;6!UBERON:0003684;6.93e-08;6!UBERON:0001178;6.93e-08;6!UBERON:0000073;7.63e-07;53!UBERON:0002616;7.63e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.89e-28,114;UBERON:0003075,1.66e-14,82;UBERON:0007284,1.66e-14,82;UBERON:0002346,5.52e-14,86;UBERON:0001049,4.94e-13,56;UBERON:0005068,4.94e-13,56;UBERON:0006241,4.94e-13,56;UBERON:0007135,4.94e-13,56;UBERON:0010314,5.95e-13,132;UBERON:0010371,2.68e-11,104;UBERON:0000073,4.17e-11,53;UBERON:0002616,4.17e-11,53;UBERON:0001017,2.85e-10,81;UBERON:0001016,3.17e-09,89;UBERON:0000025,4.01e-09,192;UBERON:0000955,1.36e-08,68;UBERON:0006238,1.36e-08,68;UBERON:0003076,4.36e-08,15;UBERON:0003057,4.36e-08,15;UBERON:0004111,6.92e-08,240;UBERON:0003688,7.19e-08,6;UBERON:0002358,7.19e-08,6;UBERON:0003684,7.19e-08,6;UBERON:0001178,7.19e-08,6;UBERON:0004121,2.77e-07,171;UBERON:0000924,2.77e-07,171;UBERON:0006601,2.77e-07,171;UBERON:0002780,3.09e-07,41;UBERON:0001890,3.09e-07,41;UBERON:0003080,3.09e-07,41;UBERON:0006240,3.09e-07,41;UBERON:0003528,3.37e-07,34;UBERON:0002020,3.37e-07,34;UBERON:0001893,4.07e-07,34;UBERON:0003056,4.42e-07,61 | |||
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|phase1_expression=19.257908202679,10.7050261945492,17.1964372997085,14.0102617694383,8.93922188854576,10.4680622892044,0,0,1.30592814099919,0.982935746006035,1.39560233594486,0.436882744260345,1.84636884759917,0.495065411840187,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,2.21617904538218,0.816002764977012,3.13454721478088,1.71741592278634,1.23186982565596,0.753255837568817,0,0,0.0787107813136792,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55725123687061,1.44575660953827,1.00267582127178,2.60723734129483,0,0.973269740605272,0.0945348171640679,0.443458794925128,0.351339142772504,1.30979075497713,0.364295288292542,1.11235332835329,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0,1.69592382577203,0,1.10047216776027,1.46296476575767,0,0.35576626268671,0,0.402829317109147,0,0.488124115096339,0.367663080345869,0.81014194788176,0.267899184852239,0,0.112611480483322,1.53316637465883,1.89853131913626,0.732806975721629,0,0,0,0,1.39293562831038,0.529636723252875,3.72887606973458,0.354668382198357,0.560677600142307,0,1.48000529050296,0.933633106199299,0.808264032418128,1.9615428373615,1.05950199351452,0,0.70296429550139,0.624320153660641,0,0.149448680551801,0.352303495931295,0.323745888736263,0.280901613404497,0.408308342509787,0.368502951935304,0,0,0.989067717114227,0.910161361938026,0,0.336672227908132,0.500474079487857,0.277064115484183,1.31693286264251,0.919463387397059,0.45071417671979,1.02088964844019,3.40840307808838,0.427114777637135,0.211931901159562,4.20127534518163,0.309157587715317,1.8034837803194,0.744467425326359,6.58227695740938,5.16416127354353,2.52433774244115,0.460249493211497,0.80823028409406,4.9701342952326,4.83610071492673,2.54340888465731,0.386521706326594,0,0.286804595389004,0,0.132529768321485,0.348581828608555,0.10366105501537,0,0,0,1.28648187638577,1.38134921352481,1.39310378409594,0,0.828147600278907,0.505754070234305,0.964044119533928,0.772057809126758,0.435758888184812,0.71181185733329,0.404493924480493,0,0.38474715694639,0,0,2.057870056657,2.94017422771084,0,0,2.95394953340702,0,0.491953754172454,0.343135620597051,0.548751427043128,0,0.301586917234893,0.277765335475589,0.977424915930974,0,1.44331342025273,0.927443239800615,1.05667824812239,0.721832238805369,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0.380987365753014,1.52795370223311,0,1.71072446022705,0.822619941626588,0.600686115687835,0.285826432630578,0.672786506072164,0.87192013766656,0.2933531432838,0.129271715757778,3.57656445851882,0,0.797814349754612,0,1.54324424557285,0,2.1313774321288,0.285955987316295,1.62786481617433,0,0.65147236858747,2.13235169245527,0,2.41151501647669,0.871533458600294,2.0994328148232,0,0,0,1.91699884393266,0,0,2.75084482668401,1.43833425785268,3.76028022803781,0,0,0,0,4.31960861178188,0,3.09315525111078,0.670065061337395,0.637938751653163,0,0,0,1.2269149171914,0.500170521059677,1.08506009479894,1.87173775377726,1.96271887676878,1.41932173530541,0.702848489956279,2.40756879782175,2.27407504055985,0,0.664225598535437,0.553107505625109,0.521301686808497,0.587403472388222,0.686286847621712,0,0,0,0,1.66435439510497,0,9.6762045049323,12.7373437829092,10.1037633995906,7.30393150757495,8.18731598506726,4.98647155545183,16.325987308949,0.154209693802656,0.355123450626254,0.164254312027618,0,0.232420756919918,0,0.601519410909855,0.276242966807689,0.574072240823034,0.182091168006717,0.917870904715969,0.451199612907412,0.15403067420883,0,0,0.316654886678627,2.27466768141793,1.02056223165909,0.647747748306418,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.895499018888713,0,0,3.07740150139667,5.9042636225947,4.22991913063594,1.75169719801128,0.54941678891006,0.330037999682352,1.14853107599234,0.650060246036521,1.6068392984416,0.580024309752732,0.770243085573222,0.307007349452259,0.551346289938122,0.537101224341368,0.290033387828457,0.255679882248303,0.534192213880424,0,1.15314040419064,0.510450849978337,0.4046311234222,0.929691098594572,0.62962469366128,1.3940745403212,0.924100740528266,0,0,0.18532421910392,1.71749864090389,0.372158369359667,0.316379424718726,0.190630193923825,0.767693373934002,2.1396949401696,1.27281299170375,0,0.359744915166629,1.37268514868027,0.589062011728432,2.02182481573316,1.58510321173008,1.26377536871694,0.48763373908959,0,2.11300293513511,0.818999468447914,0.565621727814851,0,2.2054613741845,1.99031692572366,1.31535265576129,0.578775534266688,0.655894752046633,0.405820753925408,0.6196469961995,0.845086807596724,0.143411352204052,0.294747123039363,0.35667105148125,1.06428319221179,2.11107635297664,0.987884678879706,0,0.699869440489966,0.384888450902048,0.670302275535787,1.08890984861323,1.41215701165169,0.43050537267123,0,0.4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| ||
|short_description=p3@CHST3 | |short_description=p3@CHST3 | ||
}} | }} |
Latest revision as of 04:48, 19 September 2015
Short description: | p3@CHST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHST3_5end |
Coexpression cluster: | NA |
Association with transcript: | 143bp_to_ENST00000373115_5end |
EntrezGene: | CHST3 |
HGNC: | 1971 |
UniProt: | Q7LGC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.48e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.89e-28 | 114 |
neural plate | 1.66e-14 | 82 |
presumptive neural plate | 1.66e-14 | 82 |
neurectoderm | 5.52e-14 | 86 |
neural tube | 4.94e-13 | 56 |
neural rod | 4.94e-13 | 56 |
future spinal cord | 4.94e-13 | 56 |
neural keel | 4.94e-13 | 56 |
structure with developmental contribution from neural crest | 5.95e-13 | 132 |
ecto-epithelium | 2.68e-11 | 104 |
regional part of nervous system | 4.17e-11 | 53 |
regional part of brain | 4.17e-11 | 53 |
central nervous system | 2.85e-10 | 81 |
nervous system | 3.17e-09 | 89 |
tube | 4.01e-09 | 192 |
brain | 1.36e-08 | 68 |
future brain | 1.36e-08 | 68 |
posterior neural tube | 4.36e-08 | 15 |
chordal neural plate | 4.36e-08 | 15 |
anatomical conduit | 6.92e-08 | 240 |
omentum | 7.19e-08 | 6 |
peritoneum | 7.19e-08 | 6 |
abdominal cavity | 7.19e-08 | 6 |
visceral peritoneum | 7.19e-08 | 6 |
ectoderm-derived structure | 2.77e-07 | 171 |
ectoderm | 2.77e-07 | 171 |
presumptive ectoderm | 2.77e-07 | 171 |
regional part of forebrain | 3.09e-07 | 41 |
forebrain | 3.09e-07 | 41 |
anterior neural tube | 3.09e-07 | 41 |
future forebrain | 3.09e-07 | 41 |
brain grey matter | 3.37e-07 | 34 |
gray matter | 3.37e-07 | 34 |
telencephalon | 4.07e-07 | 34 |
pre-chordal neural plate | 4.42e-07 | 61 |