FFCP PHASE1:Hg19::chr2:192542879..192542892,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26232 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENST00000451500_5end | |||
|cluster_id=chr2:192542879..192542892,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_OBFC2A_5end | |||
|id=chr2:192542879..192542892,+ | |||
|ontology_enrichment_celltype=CL:0000048!4.57e-27!430;CL:0000766!2.31e-26!76;CL:0000723!5.76e-26!436;CL:0000034!1.76e-23!444;CL:0000557!7.30e-23!71;CL:0002009!2.24e-22!65;CL:0002057!7.40e-22!42;CL:0000839!3.64e-21!70;CL:0002194!4.14e-21!63;CL:0000576!4.14e-21!63;CL:0000040!4.14e-21!63;CL:0000559!4.14e-21!63;CL:0000144!9.27e-20!625;CL:0002371!1.13e-18!591;CL:0000860!1.91e-18!45;CL:0000134!3.43e-17!358;CL:0000763!3.76e-17!112;CL:0000049!3.76e-17!112;CL:0000738!1.45e-16!140;CL:0002320!1.60e-16!365;CL:0000548!3.00e-15!679;CL:0000004!3.00e-15!679;CL:0000255!3.00e-15!679;CL:0000003!1.21e-14!722;CL:0000012!1.44e-14!682;CL:0002031!2.27e-13!124;CL:0000219!4.35e-12!390;CL:0002032!7.39e-12!165;CL:0000837!7.39e-12!165;CL:0002087!9.65e-12!119;CL:0000680!6.05e-11!57;CL:0000056!6.05e-11!57;CL:0000355!6.05e-11!57;CL:0000192!1.25e-10!42;CL:0000514!1.25e-10!42;CL:0000037!1.59e-10!172;CL:0000566!1.59e-10!172;CL:0000187!5.16e-10!54;CL:0000988!4.83e-09!182;CL:0000359!7.15e-09!32;CL:0000183!1.95e-08!59;CL:0000063!5.40e-08!578;CL:0000393!2.35e-07!60;CL:0000211!2.35e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.78e-19;39!CL:0000234;4.78e-19;39!CL:0000860;9.93e-19;33!CL:0002057;9.93e-19;33!CL:0000766;7.40e-14;69!CL:0000576;8.44e-14;48!CL:0000359;2.49e-08;32!CL:0000192;1.36e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.97e-31,72;CL:0000473,1.24e-27,48;CL:0000234,1.24e-27,48;CL:0000557,3.61e-27,67;CL:0002009,1.80e-26,61;CL:0002194,4.84e-25,59;CL:0000576,4.84e-25,59;CL:0000040,4.84e-25,59;CL:0000559,4.84e-25,59;CL:0000839,7.59e-25,66;CL:0000048,9.31e-25,427;CL:0000860,1.07e-23,42;CL:0002057,1.07e-23,42;CL:0000723,1.23e-23,433;CL:0000034,1.41e-21,441;CL:0000763,8.77e-20,108;CL:0000049,8.77e-20,108;CL:0000738,2.61e-18,136;CL:0000134,6.42e-16,354;CL:0002320,1.33e-15,361;CL:0002031,2.46e-14,120;CL:0002032,1.54e-12,161;CL:0000837,1.54e-12,161;CL:0002087,1.61e-12,115;CL:0000037,1.81e-11,168;CL:0000219,4.55e-11,386;CL:0000192,6.64e-10,43;CL:0000514,6.64e-10,43;CL:0000988,7.05e-10,177;CL:0000680,8.86e-10,58;CL:0000056,8.86e-10,58;CL:0000355,8.86e-10,58;CL:0000187,7.94e-09,55;CL:0000359,1.36e-08,32 | |||
|ontology_enrichment_development_v019=CL:0002057;2.13e-17;42!CL:0000514;1.36e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.19e-30!167;UBERON:0002390!1.07e-22!102;UBERON:0003061!1.07e-22!102;UBERON:0002193!7.57e-22!112;UBERON:0002371!7.88e-22!80;UBERON:0004765!1.17e-19!101;UBERON:0001434!1.17e-19!101;UBERON:0001474!2.00e-19!86;UBERON:0002384!1.75e-16!375;UBERON:0003081!7.67e-15!216;UBERON:0002405!1.54e-13!115;UBERON:0000914!4.34e-11!83;UBERON:0002329!4.34e-11!83;UBERON:0003077!4.34e-11!83;UBERON:0003059!4.34e-11!83;UBERON:0007282!4.34e-11!83;UBERON:0009618!4.34e-11!83;UBERON:0007285!4.34e-11!83;UBERON:0004290!4.23e-10!70;UBERON:0001134!1.48e-09!61;UBERON:0002036!1.48e-09!61;UBERON:0003082!1.48e-09!61;UBERON:0002385!1.74e-09!63;UBERON:0001015!1.74e-09!63;UBERON:0000383!1.74e-09!63;UBERON:0000926!2.53e-09!448;UBERON:0004120!2.53e-09!448;UBERON:0006603!2.53e-09!448;UBERON:0000486!1.66e-08!82;UBERON:0004573!5.69e-07!33;UBERON:0004571!5.69e-07!33 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.98e-31,167;UBERON:0002371,1.70e-25,76;UBERON:0002390,2.34e-25,98;UBERON:0003061,2.34e-25,98;UBERON:0002193,1.67e-23,108;UBERON:0004765,1.21e-22,90;UBERON:0001474,1.56e-22,82;UBERON:0001434,9.14e-22,100;UBERON:0002405,1.02e-21,93;UBERON:0000926,6.66e-17,315;UBERON:0004120,6.66e-17,315;UBERON:0006603,6.66e-17,315;UBERON:0002384,1.54e-15,371;UBERON:0003081,1.73e-15,203;UBERON:0002329,4.70e-09,71;UBERON:0003059,4.70e-09,71;UBERON:0007282,4.70e-09,71;UBERON:0004290,4.70e-09,71;UBERON:0009618,4.70e-09,71;UBERON:0007524,9.66e-09,73;UBERON:0001134,1.16e-08,62;UBERON:0002036,1.16e-08,62;UBERON:0003082,1.16e-08,62;UBERON:0003077,1.19e-08,72;UBERON:0007285,1.19e-08,72;UBERON:0002385,1.98e-08,64;UBERON:0001015,1.98e-08,64;UBERON:0000383,1.98e-08,64;UBERON:0007503,8.20e-08,78;UBERON:0000486,1.22e-07,83;UBERON:0004573,4.27e-07,33;UBERON:0004571,4.27e-07,33 | |||
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| |||
|short_description=p3@OBFC2A | |||
}} |
Latest revision as of 05:02, 19 September 2015
Short description: | p3@OBFC2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OBFC2A_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 6bp_to_ENST00000451500_5end |
EntrezGene: | OBFC2A |
HGNC: | 26232 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.98e-31 | 167 |
bone marrow | 1.70e-25 | 76 |
hematopoietic system | 2.34e-25 | 98 |
blood island | 2.34e-25 | 98 |
hemolymphoid system | 1.67e-23 | 108 |
skeletal element | 1.21e-22 | 90 |
bone element | 1.56e-22 | 82 |
skeletal system | 9.14e-22 | 100 |
immune system | 1.02e-21 | 93 |
mesoderm | 6.66e-17 | 315 |
mesoderm-derived structure | 6.66e-17 | 315 |
presumptive mesoderm | 6.66e-17 | 315 |
connective tissue | 1.54e-15 | 371 |
lateral plate mesoderm | 1.73e-15 | 203 |
somite | 4.70e-09 | 71 |
presomitic mesoderm | 4.70e-09 | 71 |
presumptive segmental plate | 4.70e-09 | 71 |
dermomyotome | 4.70e-09 | 71 |
trunk paraxial mesoderm | 4.70e-09 | 71 |
dense mesenchyme tissue | 9.66e-09 | 73 |
skeletal muscle tissue | 1.16e-08 | 62 |
striated muscle tissue | 1.16e-08 | 62 |
myotome | 1.16e-08 | 62 |
paraxial mesoderm | 1.19e-08 | 72 |
presumptive paraxial mesoderm | 1.19e-08 | 72 |
muscle tissue | 1.98e-08 | 64 |
musculature | 1.98e-08 | 64 |
musculature of body | 1.98e-08 | 64 |
epithelial vesicle | 8.20e-08 | 78 |
multilaminar epithelium | 1.22e-07 | 83 |
systemic artery | 4.27e-07 | 33 |
systemic arterial system | 4.27e-07 | 33 |