FFCP PHASE1:Hg19::chr15:77713222..77713271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10363 | |EntrezGene=10363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5001 | |HGNC=5001 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP66 | |UniProt=Q9NP66 | ||
|association_with_transcript=0bp_to_ENST00000558176,ENST00000559035,NM_018200,uc002bcq.1,uc002bcr.2,uc002bcs.2_5end | |association_with_transcript=0bp_to_ENST00000558176,ENST00000559035,NM_018200,uc002bcq.1,uc002bcr.2,uc002bcs.2_5end | ||
|cluster_id=chr15:77713222..77713271,+ | |||
|description=CAGE_peak_1_at_HMG20A_5end | |description=CAGE_peak_1_at_HMG20A_5end | ||
|id=chr15:77713222..77713271,+ | |id=chr15:77713222..77713271,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.34e-08!24;CL:0000826!4.34e-08!24 | |ontology_enrichment_celltype=CL:0000945!4.34e-08!24;CL:0000826!4.34e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.63e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.34e-08,24;CL:0000826,4.34e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.43e-08;82 | |||
|ontology_enrichment_disease=DOID:1240!2.33e-09!39;DOID:2531!2.17e-08!51;DOID:0060083!2.17e-08!51;DOID:8692!1.82e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.37e-07;39!DOID:8692;3.10e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.33e-09,39;DOID:2531,2.17e-08,51;DOID:0060083,2.17e-08,51;DOID:8692,1.82e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.54e-24!94;UBERON:0001016!7.54e-24!94;UBERON:0005743!9.16e-23!86;UBERON:0001017!1.46e-22!82;UBERON:0007023!6.95e-20!115;UBERON:0000955!9.24e-20!69;UBERON:0006238!9.24e-20!69;UBERON:0001049!8.36e-19!57;UBERON:0005068!8.36e-19!57;UBERON:0006241!8.36e-19!57;UBERON:0007135!8.36e-19!57;UBERON:0002780!1.04e-18!41;UBERON:0001890!1.04e-18!41;UBERON:0006240!1.04e-18!41;UBERON:0002346!2.10e-18!90;UBERON:0003080!7.90e-18!42;UBERON:0002616!3.16e-17!59;UBERON:0003075!3.24e-17!86;UBERON:0007284!3.24e-17!86;UBERON:0001893!3.29e-16!34;UBERON:0002791!1.42e-15!33;UBERON:0001869!1.52e-15!32;UBERON:0002020!4.17e-15!34;UBERON:0003528!4.17e-15!34;UBERON:0000924!8.31e-15!173;UBERON:0006601!8.31e-15!173;UBERON:0003056!3.24e-14!61;UBERON:0004121!8.46e-14!169;UBERON:0000153!1.55e-13!129;UBERON:0007811!1.55e-13!129;UBERON:0002619!1.03e-12!22;UBERON:0000033!2.65e-12!123;UBERON:0001950!2.96e-12!20;UBERON:0000956!3.99e-12!25;UBERON:0000203!3.99e-12!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.72e-14;34!UBERON:0001869;4.53e-14;32!UBERON:0002791;1.14e-13;32!UBERON:0002780;1.30e-13;41!UBERON:0001890;1.30e-13;41!UBERON:0003528;2.06e-13;34!UBERON:0002020;2.06e-13;34!UBERON:0002619;1.07e-12;22!UBERON:0001950;3.20e-12;20!UBERON:0000956;5.04e-12;25!UBERON:0000203;5.04e-12;25!UBERON:0000073;1.84e-11;53!UBERON:0002616;1.84e-11;53!UBERON:0000955;3.02e-10;68!UBERON:0001016;9.58e-10;83!UBERON:0001017;1.01e-09;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.08e-24,89;UBERON:0001017,3.28e-23,81;UBERON:0000955,2.01e-20,68;UBERON:0006238,2.01e-20,68;UBERON:0007023,1.51e-19,114;UBERON:0001049,1.53e-19,56;UBERON:0005068,1.53e-19,56;UBERON:0006241,1.53e-19,56;UBERON:0007135,1.53e-19,56;UBERON:0000073,5.74e-19,53;UBERON:0002616,5.74e-19,53;UBERON:0002780,1.04e-18,41;UBERON:0001890,1.04e-18,41;UBERON:0003080,1.04e-18,41;UBERON:0006240,1.04e-18,41;UBERON:0002346,6.33e-18,86;UBERON:0003075,9.70e-17,82;UBERON:0007284,9.70e-17,82;UBERON:0001893,3.29e-16,34;UBERON:0001869,1.52e-15,32;UBERON:0003056,2.95e-15,61;UBERON:0003528,4.17e-15,34;UBERON:0002020,4.17e-15,34;UBERON:0002791,5.32e-15,32;UBERON:0004121,3.39e-14,171;UBERON:0000924,3.39e-14,171;UBERON:0006601,3.39e-14,171;UBERON:0002619,1.03e-12,22;UBERON:0001950,2.96e-12,20;UBERON:0000956,3.99e-12,25;UBERON:0000203,3.99e-12,25;UBERON:0010371,7.76e-11,104;UBERON:0011216,2.66e-10,223;UBERON:0010314,7.93e-09,132 | |||
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99938136 | ||
|short_description=p1@HMG20A | |short_description=p1@HMG20A | ||
}} | }} |
Latest revision as of 05:27, 19 September 2015
Short description: | p1@HMG20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HMG20A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000558176, ENST00000559035, NM_018200, uc002bcq.1, uc002bcr.2, uc002bcs.2_5end |
EntrezGene: | HMG20A |
HGNC: | 5001 |
UniProt: | Q9NP66 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.34e-08 | 24 |
pro-B cell | 4.34e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.33e-09 | 39 |
hematologic cancer | 2.17e-08 | 51 |
immune system cancer | 2.17e-08 | 51 |
myeloid leukemia | 1.82e-07 | 31 |