FFCP PHASE1:Hg19::chr12:54653129..54653149,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:54653129..54653149,- to FFCP PHASE1:Hg19::chr12:54653129..54653149,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23468 | |EntrezGene=23468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1555 | |HGNC=1555 | ||
|TSSclassifier=strong | |||
|UniProt=P45973 | |UniProt=P45973 | ||
|association_with_transcript=179bp_to_ENST00000550411,NM_001127322,uc001sfh.3_5end | |||
|cluster_id=chr12:54653129..54653149,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_8_at_CBX5_5end | |||
|id=chr12:54653129..54653149,- | |||
|ontology_enrichment_celltype=CL:0000133!8.22e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.28e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.81e-11;1 | |||
|ontology_enrichment_disease=DOID:3095!1.71e-12!22;DOID:2994!1.71e-12!22;DOID:171!2.00e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.97e-07;22!DOID:2994;1.97e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.84e-07,22;DOID:2994,1.84e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!5.26e-29!94;UBERON:0001016!5.26e-29!94;UBERON:0005743!4.58e-25!86;UBERON:0001017!4.70e-24!82;UBERON:0002346!4.03e-21!90;UBERON:0001049!1.61e-20!57;UBERON:0005068!1.61e-20!57;UBERON:0006241!1.61e-20!57;UBERON:0007135!1.61e-20!57;UBERON:0003075!7.89e-19!86;UBERON:0007284!7.89e-19!86;UBERON:0002780!1.33e-18!41;UBERON:0001890!1.33e-18!41;UBERON:0006240!1.33e-18!41;UBERON:0002616!1.94e-18!59;UBERON:0000955!3.53e-18!69;UBERON:0006238!3.53e-18!69;UBERON:0003080!7.69e-18!42;UBERON:0000924!1.50e-17!173;UBERON:0006601!1.50e-17!173;UBERON:0001893!6.05e-17!34;UBERON:0003056!7.29e-17!61;UBERON:0002020!2.19e-16!34;UBERON:0003528!2.19e-16!34;UBERON:0002791!2.88e-16!33;UBERON:0004121!9.64e-16!169;UBERON:0001869!1.62e-15!32;UBERON:0002619!4.22e-12!22;UBERON:0000956!4.44e-12!25;UBERON:0000203!4.44e-12!25;UBERON:0000033!1.39e-11!123;UBERON:0000153!3.61e-11!129;UBERON:0007811!3.61e-11!129;UBERON:0001950!1.77e-10!20;UBERON:0007023!6.23e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;8.59e-21;2!UBERON:0005162;8.59e-21;2!UBERON:0000122;8.59e-21;2!UBERON:0002336;2.81e-11;1!UBERON:0000941;2.81e-11;1!UBERON:0007195;2.81e-11;1!UBERON:0001785;2.81e-11;1!UBERON:0002464;2.81e-11;1!UBERON:0004904;2.81e-11;1!UBERON:0011215;2.81e-11;1!UBERON:0001018;2.81e-11;1!UBERON:0001021;2.81e-11;1!UBERON:0002473;2.81e-11;1!UBERON:0005340;2.81e-11;1!UBERON:0003544;2.81e-11;1!UBERON:0005970;2.81e-11;1!UBERON:0002316;2.81e-11;1!UBERON:0001020;2.81e-11;1!UBERON:0002437;2.81e-11;1!UBERON:0002780;2.85e-08;41!UBERON:0001890;2.85e-08;41!UBERON:0001016;4.07e-08;83!UBERON:0002619;3.55e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,3.84e-21,2;UBERON:0000122,3.84e-21,2;UBERON:0003714,7.05e-21,2;UBERON:0001016,8.46e-14,89;UBERON:0000941,1.78e-11,1;UBERON:0001785,1.78e-11,1;UBERON:0002464,1.78e-11,1;UBERON:0004904,1.78e-11,1;UBERON:0001021,1.78e-11,1;UBERON:0003902,1.78e-11,1;UBERON:0005425,1.78e-11,1;UBERON:0002336,1.97e-11,1;UBERON:0011215,1.97e-11,1;UBERON:0001018,1.97e-11,1;UBERON:0002473,1.97e-11,1;UBERON:0005340,1.97e-11,1;UBERON:0003544,1.97e-11,1;UBERON:0005970,1.97e-11,1;UBERON:0002316,1.97e-11,1;UBERON:0001020,1.97e-11,1;UBERON:0002437,1.97e-11,1;UBERON:0007195,4.01e-11,1;UBERON:0001017,1.27e-10,81;UBERON:0002780,4.56e-08,41;UBERON:0001890,4.56e-08,41;UBERON:0003080,4.56e-08,41;UBERON:0006240,4.56e-08,41;UBERON:0002346,4.73e-08,86;UBERON:0001049,7.67e-08,56;UBERON:0005068,7.67e-08,56;UBERON:0006241,7.67e-08,56;UBERON:0007135,7.67e-08,56;UBERON:0004121,1.14e-07,171;UBERON:0000924,1.14e-07,171;UBERON:0006601,1.14e-07,171;UBERON:0003056,3.83e-07,61;UBERON:0002619,4.66e-07,22;UBERON:0001893,5.97e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0,0.382067028739756,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0.973269740605272,0.283604451492204,0.221729397462564,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0.468642863667593,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0.877955241761676,0.30648779579902,0.150238058906597,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0.515262646192195,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.460249493211497,0.969876340912871,0,0,0,0,0,0.286804595389004,0.365921118388786,0.530119073285941,0.580969714347592,0.725627385107593,0.504641701751257,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0.723033089650446,0.330881918197182,0.217879444092406,0,0,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0.234817388471643,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0.300343057843917,0,0.336393253036082,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,3.04913549066956,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0.49076596687656,0,0,0,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0,0.60818530127658,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.492762936082855,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0.422215270595328,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0.994147647766298,0.422008249231538,0,0,0.211125408127993,0,0,0,0,0.615424027305347,0.622079175323615,0,0,0,0,0,1.11136990144637,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0.885741385813839,0.120596438625408,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0.23056390438806,0.538545866458633,0.651884231532048,0,0.0915975934018623,0,0,0.156980256395025,0,0.451191321234361,0.588187602953219,0.671286347903371,0,0,0.632994193584081,0,0,0,0,0,0.611030144933625,0,0,0,1.41542379259422,0,0.937057782901357,0,0,0,0.789168805698781,2.41981432097328,0.30607276163049,0.442306057399416,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0.687944129886466,0.290268993867255,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.176512253383001,0.90392296312213,0,0.19871461170299,0.696418755514666,0,0,0,0,0,0,0.343189995723929,0,0.248505071130865,0,0,0.209205692624666,0,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0.717873024576814,0,0,0,0.268733889946905,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,1.0896272488926,0.482259445395058,0.550157746388935,0.415440338029185,0,0,0.728994679896296,0,0.315222829196793,0.419636705079985,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0.500763722825999,0.573409195690071,0.554645257684261,0.745156835296601,17.2935793670289,0,0.454947352624943,0,0.235265819698172,0.468334905806882,0.144921028610825,0.447764408660622,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0.302461847526478,0.310874401165561,0.295710299979268,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0.686791410365586,1.01024846629776,0,0,0.214441591374926,0.521988583930423,0.226705925512272,0.926089897295336,0.489473409012935,0,0.308801447160972,0,0.176689145945881,0,0,0.76872455576384,0.345430341731199,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0.39997479170986,0,0,0.567515953566836,0.184105950251841,0,0,0.639471856518258,0.107824811396682,0.629063767423586,0.218419276384028,0.169732529954025,1.2754495206101,0.619678821295011,1.11728983594649,0,0,0.80057074828547,0.705351887381368,0,0.449604575675217,0,0.319267718114302,1.02558182120378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| ||
|short_description=p8@CBX5 | |||
}} | }} |
Latest revision as of 05:31, 19 September 2015
Short description: | p8@CBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CBX5_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 179bp_to_ENST00000550411, NM_001127322, uc001sfh.3_5end |
EntrezGene: | CBX5 |
HGNC: | 1555 |
UniProt: | P45973 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.84e-07 | 22 |
germ cell cancer | 1.84e-07 | 22 |