FFCP PHASE1:Hg19::chr8:82355027..82355036,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5375 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9117 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=333bp_to_DQ786226_5end | |||
|cluster_id=chr8:82355027..82355036,- | |||
|coexpression_cluster_id=C1033 | |||
|description=CAGE_peak_5_at_PMP2_5end | |||
|id=chr8:82355027..82355036,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.66e-23;3!UBERON:0003057;3.66e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;1.09e-44;6!UBERON:0002148;3.61e-34;2!UBERON:0006331;3.61e-34;2!UBERON:0009662;3.61e-34;2!UBERON:0000988;2.62e-23;3!UBERON:0001896;3.66e-23;3!UBERON:0002240;3.66e-23;3!UBERON:0005174;3.66e-23;3!UBERON:0005290;3.66e-23;3!UBERON:0001137;3.66e-23;3!UBERON:0004733;4.86e-23;12!UBERON:0002028;4.86e-23;12!UBERON:0004732;2.28e-21;13!UBERON:0002680;1.04e-08;9!UBERON:0000125;1.04e-08;9!UBERON:0002308;1.04e-08;9!UBERON:0001895;1.04e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.22e-44,6;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0002148,3.61e-34,2;UBERON:0006331,3.61e-34,2;UBERON:0009662,3.61e-34,2;UBERON:0000988,2.62e-23,3;UBERON:0002240,3.27e-23,3;UBERON:0005174,3.27e-23,3;UBERON:0001137,3.27e-23,3;UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0004733,5.14e-23,12;UBERON:0002028,5.14e-23,12;UBERON:0007277,5.14e-23,12;UBERON:0004732,2.40e-21,13;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0002680,1.04e-08,9;UBERON:0000125,1.04e-08,9;UBERON:0002308,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p5@PMP2 | |||
}} |
Latest revision as of 05:53, 19 September 2015
Short description: | p5@PMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PMP2_5end |
Coexpression cluster: | C1033_locus_medulla_spinal_globus_amygdala_pineal_hippocampus |
Association with transcript: | 333bp_to_DQ786226_5end |
EntrezGene: | PMP2 |
HGNC: | 9117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 1.22e-44 | 6 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
locus ceruleus | 3.61e-34 | 2 |
brainstem nucleus | 3.61e-34 | 2 |
hindbrain nucleus | 3.61e-34 | 2 |
pons | 2.62e-23 | 3 |
spinal cord | 3.27e-23 | 3 |
dorsal region element | 3.27e-23 | 3 |
dorsum | 3.27e-23 | 3 |
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
segmental subdivision of hindbrain | 5.14e-23 | 12 |
hindbrain | 5.14e-23 | 12 |
presumptive hindbrain | 5.14e-23 | 12 |
segmental subdivision of nervous system | 2.40e-21 | 13 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
regional part of metencephalon | 1.04e-08 | 9 |
neural nucleus | 1.04e-08 | 9 |
nucleus of brain | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |