FFCP PHASE1:Hg19::chr10:75568146..75568184,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8509 | |EntrezGene=8509 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7681 | |HGNC=7681 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-237bp_to_uc010qku.1_5end | |association_with_transcript=-237bp_to_uc010qku.1_5end | ||
|cluster_id=chr10:75568146..75568184,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_6_at_NDST2_5end | |description=CAGE_peak_6_at_NDST2_5end | ||
|id=chr10:75568146..75568184,- | |id=chr10:75568146..75568184,- | ||
|ontology_enrichment_celltype=CL:0002057!2.31e-08!42;CL:0000860!5.87e-08!45;CL:0000766!1.58e-07!76;CL:0000839!8.01e-07!70 | |ontology_enrichment_celltype=CL:0002057!2.31e-08!42;CL:0000860!5.87e-08!45;CL:0000766!1.58e-07!76;CL:0000839!8.01e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.13e-23;5!CL:0000163;3.11e-13;9!CL:0000775;4.30e-10;3!CL:0000860;2.22e-09;33!CL:0002057;2.22e-09;33!CL:0000151;1.89e-08;36!CL:0000511;3.44e-08;1!CL:0002625;3.44e-08;1!CL:0000228;3.44e-08;1!CL:0002581;3.44e-08;1!CL:0000216;3.44e-08;1!CL:0002372;3.44e-08;1!CL:0000766;1.08e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.14e-23,5;CL:0002028,1.14e-23,5;CL:0000766,9.66e-14,72;CL:0000163,3.12e-13,9;CL:0000839,9.69e-11,66;CL:0000557,1.49e-10,67;CL:0000775,3.93e-10,3;CL:0000151,6.99e-09,36;CL:0000511,2.02e-08,1;CL:0002625,2.02e-08,1;CL:0000216,2.02e-08,1;CL:0000763,2.13e-08,108;CL:0000049,2.13e-08,108;CL:0002581,2.69e-08,1;CL:0000228,3.33e-08,1;CL:0002372,3.33e-08,1;CL:0000738,2.74e-07,136;CL:0000860,3.03e-07,42;CL:0002057,3.03e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.44e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;3.44e-08;1!UBERON:0000941;3.44e-08;1!UBERON:0001343;3.44e-08;1!UBERON:0001785;3.44e-08;1!UBERON:0002464;3.44e-08;1!UBERON:0004904;3.44e-08;1!UBERON:0001021;3.44e-08;1!UBERON:0004910;3.44e-08;1!UBERON:0004813;3.44e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.31e-09,76;UBERON:0002405,1.47e-08,93;UBERON:0001136,2.02e-08,1;UBERON:0001343,2.02e-08,1;UBERON:0004910,2.02e-08,1;UBERON:0005154,2.02e-08,1;UBERON:0005295,2.02e-08,1;UBERON:0004813,2.02e-08,1;UBERON:0005297,2.02e-08,1;UBERON:0005294,2.02e-08,1;UBERON:0010141,2.02e-08,1;UBERON:0005891,2.02e-08,1;UBERON:0001474,2.70e-08,82;UBERON:0000941,3.10e-08,1;UBERON:0001785,3.10e-08,1;UBERON:0002464,3.10e-08,1;UBERON:0004904,3.10e-08,1;UBERON:0001021,3.10e-08,1;UBERON:0003902,3.10e-08,1;UBERON:0005425,3.10e-08,1;UBERON:0002390,5.11e-08,98;UBERON:0003061,5.11e-08,98;UBERON:0001434,8.08e-08,100;UBERON:0004765,2.13e-07,90;UBERON:0002193,4.39e-07,108 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.293600439334847,0.553995408531877,0.802177789880567,0,0.447830948479849,0.647787332037959,0.77272670290256,0.872389432677388,0.377875943688809,1.21292030593908,0.464858073811369,0.411167888021826,0.619412741790207,0.863077176966451,1.0246428261164,0,0.689491361473237,0.645484683583826,0,0.752969358170419,0.818718450173537,0.224723484445085,1.83650335422542,1.60464513538047,1.27867425159808,0.989553900560148,2.39356389145958,0.426224750532694,0.290209238628584,0,0.622822248995575,1.25624332628372,0,0.434377689410233,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0.334372990781356,0.32592226663359,0.473447805734733,0,0.222820913770347,0.883817722424512,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0.276350017785848,0,0,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0,0,0,0.56530794192401,0.838998872419812,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0.735326160691737,0.81014194788176,0.0892997282840798,0.44905874525234,0,0,0.949265659568129,0,0,0,0,0,0.379891534993739,0,0.573673241497627,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0,0,0.245668634623536,0.309977343527296,4.75201142912821,0.494533858557114,0,0.718618141816238,0,0.250237039743928,0,0,0,0.600952235626387,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.860413786167011,0.365921118388786,0.132529768321485,0,0.414644220061482,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0,0.185176890317059,0,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0,0,0,0,0.492663237895943,11.5343448557326,20.7328115540772,17.1502744566184,18.3051528468251,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.799783929456456,0,0,0,0.239624855491583,0,1.42636905040718,0.144781306667579,0,0,0,0.591092280605782,0,0.256686072559497,0,0,1.54657762555539,0,0,1.49801404789436,0,1.24324654030811,0.36807447515742,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0.587403472388222,0.343143423810856,0.620304078368662,0.647142602455851,0.320182673410333,0.606255142892519,0,0.604780586659361,0.496215615637554,0,0,0.512556597022804,0,0,1.48418066444991,0,0.710246901252508,0.0821271560138091,0,0,0.241718899183244,0,0.184161977871793,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0,0,0,1.00337954770971,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.580024309752732,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.192190067365106,0.382838137483752,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.136499911407986,0.848432591722276,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,1.64647446479951,0,0.349934720244983,0,0,0,0.376575203107117,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0.191505370132367,0.423347165447766,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0.222886768554957,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0.552567831062295,0,0,0.123084805461069,0.622079175323615,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0.174919999992391,1.44999915086959,0,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0.442317039724898,0.295547618953547,0,0,0.139423744278603,0.615602068030377,0.227884111694002,0,0.179515288819544,0,0,0.183195186803725,0.533034776018635,1.02193298195737,0,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0.123563938946503,0,0.067401132980677,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.442306057399416,0.300646838828985,0.207376382794494,0.664653872707185,0,0,0,0,0.138674673013139,0.17355973833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| 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| ||
|short_description=p6@NDST2 | |short_description=p6@NDST2 | ||
}} | }} |
Latest revision as of 07:55, 19 September 2015
Short description: | p6@NDST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_NDST2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -237bp_to_uc010qku.1_5end |
EntrezGene: | NDST2 |
HGNC: | 7681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.14e-23 | 5 |
basophil mast progenitor cell | 1.14e-23 | 5 |
myeloid leukocyte | 9.66e-14 | 72 |
endocrine cell | 3.12e-13 | 9 |
myeloid lineage restricted progenitor cell | 9.69e-11 | 66 |
granulocyte monocyte progenitor cell | 1.49e-10 | 67 |
neutrophil | 3.93e-10 | 3 |
secretory cell | 6.99e-09 | 36 |
androgen binding protein secreting cell | 2.02e-08 | 1 |
seminiferous tubule epithelial cell | 2.02e-08 | 1 |
Sertoli cell | 2.02e-08 | 1 |
myeloid cell | 2.13e-08 | 108 |
common myeloid progenitor | 2.13e-08 | 108 |
perirenal preadipocyte | 2.69e-08 | 1 |
multinucleate cell | 3.33e-08 | 1 |
myotube | 3.33e-08 | 1 |
leukocyte | 2.74e-07 | 136 |
classical monocyte | 3.03e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.03e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.31e-09 | 76 |
immune system | 1.47e-08 | 93 |
mesothelium | 2.02e-08 | 1 |
seminiferous tubule of testis | 2.02e-08 | 1 |
epithelium of male gonad | 2.02e-08 | 1 |
epithelial cord | 2.02e-08 | 1 |
sex cord | 2.02e-08 | 1 |
seminiferous tubule epithelium | 2.02e-08 | 1 |
testis sex cord | 2.02e-08 | 1 |
genital ridge | 2.02e-08 | 1 |
primitive sex cord of indifferent gonad | 2.02e-08 | 1 |
coelomic epithelium | 2.02e-08 | 1 |
bone element | 2.70e-08 | 82 |
cranial nerve II | 3.10e-08 | 1 |
cranial nerve | 3.10e-08 | 1 |
nerve trunk | 3.10e-08 | 1 |
nerve connecting eye with brain | 3.10e-08 | 1 |
nerve | 3.10e-08 | 1 |
retinal neural layer | 3.10e-08 | 1 |
presumptive neural retina | 3.10e-08 | 1 |
hematopoietic system | 5.11e-08 | 98 |
blood island | 5.11e-08 | 98 |
skeletal system | 8.08e-08 | 100 |
skeletal element | 2.13e-07 | 90 |
hemolymphoid system | 4.39e-07 | 108 |