FFCP PHASE1:Hg19::chr12:56122207..56122218,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=967 | |EntrezGene=967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1692 | |HGNC=1692 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc001shm.2_5end | |association_with_transcript=2bp_to_uc001shm.2_5end | ||
|cluster_id=chr12:56122207..56122218,- | |||
|coexpression_cluster_id=C2219 | |coexpression_cluster_id=C2219 | ||
|description=CAGE_peak_16_at_CD63_5end | |description=CAGE_peak_16_at_CD63_5end | ||
|id=chr12:56122207..56122218,- | |id=chr12:56122207..56122218,- | ||
|ontology_enrichment_celltype=CL:0000055!2.81e-19!180;CL:0000548!1.39e-18!679;CL:0000004!1.39e-18!679;CL:0000255!1.39e-18!679;CL:0000012!2.35e-18!682;CL:0000144!2.26e-17!625;CL:0002371!5.06e-17!591;CL:0000192!3.07e-15!42;CL:0000514!3.07e-15!42;CL:0000183!3.37e-15!59;CL:0000680!1.03e-14!57;CL:0000056!1.03e-14!57;CL:0000355!1.03e-14!57;CL:0000222!1.33e-14!119;CL:0000187!4.44e-13!54;CL:0000359!1.34e-12!32;CL:0000220!4.17e-12!246;CL:0002321!7.07e-12!248;CL:0000003!1.54e-11!722;CL:0000393!2.71e-10!60;CL:0000211!2.71e-10!60;CL:0000048!7.74e-09!430;CL:0000723!3.66e-08!436;CL:0000034!1.07e-07!444 | |ontology_enrichment_celltype=CL:0000055!2.81e-19!180;CL:0000548!1.39e-18!679;CL:0000004!1.39e-18!679;CL:0000255!1.39e-18!679;CL:0000012!2.35e-18!682;CL:0000144!2.26e-17!625;CL:0002371!5.06e-17!591;CL:0000192!3.07e-15!42;CL:0000514!3.07e-15!42;CL:0000183!3.37e-15!59;CL:0000680!1.03e-14!57;CL:0000056!1.03e-14!57;CL:0000355!1.03e-14!57;CL:0000222!1.33e-14!119;CL:0000187!4.44e-13!54;CL:0000359!1.34e-12!32;CL:0000220!4.17e-12!246;CL:0002321!7.07e-12!248;CL:0000003!1.54e-11!722;CL:0000393!2.71e-10!60;CL:0000211!2.71e-10!60;CL:0000048!7.74e-09!430;CL:0000723!3.66e-08!436;CL:0000034!1.07e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.40e-16;32!CL:0000192;1.55e-13;43!CL:0000134;2.64e-10;55!CL:0000048;3.29e-10;58!CL:0000723;6.84e-10;61!CL:0002594;2.94e-08;4!CL:0002540;1.06e-07;6!CL:0000187;3.54e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.05e-19,43;CL:0000514,4.05e-19,43;CL:0000359,4.39e-17,32;CL:0000680,1.48e-16,58;CL:0000056,1.48e-16,58;CL:0000355,1.48e-16,58;CL:0000048,1.85e-13,427;CL:0000187,1.98e-13,55;CL:0000723,5.77e-13,433;CL:0000034,2.50e-12,441;CL:0000393,1.86e-11,61;CL:0000211,1.86e-11,61;CL:0000222,5.72e-11,121;CL:0002594,1.17e-08,4;CL:0002540,1.01e-07,6;CL:0002567,5.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;1.55e-13;43!CL:0000355;4.62e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.72e-09;14!DOID:0060084;6.75e-07;3!DOID:127;6.75e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.17e-10,14;DOID:0060084,5.81e-07,3;DOID:127,5.81e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.40e-12!61;UBERON:0002036!2.40e-12!61;UBERON:0003082!2.40e-12!61;UBERON:0002049!3.23e-12!79;UBERON:0007798!3.23e-12!79;UBERON:0001637!6.64e-12!42;UBERON:0003509!6.64e-12!42;UBERON:0004572!6.64e-12!42;UBERON:0000926!1.13e-11!448;UBERON:0004120!1.13e-11!448;UBERON:0006603!1.13e-11!448;UBERON:0000914!1.31e-11!83;UBERON:0002329!1.31e-11!83;UBERON:0003077!1.31e-11!83;UBERON:0003059!1.31e-11!83;UBERON:0007282!1.31e-11!83;UBERON:0009618!1.31e-11!83;UBERON:0007285!1.31e-11!83;UBERON:0004290!1.51e-11!70;UBERON:0002385!2.63e-11!63;UBERON:0001015!2.63e-11!63;UBERON:0000383!2.63e-11!63;UBERON:0002204!5.42e-11!167;UBERON:0005256!6.85e-11!143;UBERON:0004573!6.69e-10!33;UBERON:0004571!6.69e-10!33;UBERON:0002100!9.26e-10!216;UBERON:0000055!9.59e-10!69;UBERON:0000486!1.02e-09!82;UBERON:0000490!2.73e-09!138;UBERON:0001981!3.13e-09!60;UBERON:0007500!3.13e-09!60;UBERON:0004537!3.13e-09!60;UBERON:0006965!3.13e-09!60;UBERON:0003914!4.57e-08!118;UBERON:0003104!1.95e-07!238;UBERON:0009142!1.95e-07!238;UBERON:0004872!4.96e-07!84;UBERON:0004535!8.39e-07!110 | |ontology_enrichment_uberon=UBERON:0001134!2.40e-12!61;UBERON:0002036!2.40e-12!61;UBERON:0003082!2.40e-12!61;UBERON:0002049!3.23e-12!79;UBERON:0007798!3.23e-12!79;UBERON:0001637!6.64e-12!42;UBERON:0003509!6.64e-12!42;UBERON:0004572!6.64e-12!42;UBERON:0000926!1.13e-11!448;UBERON:0004120!1.13e-11!448;UBERON:0006603!1.13e-11!448;UBERON:0000914!1.31e-11!83;UBERON:0002329!1.31e-11!83;UBERON:0003077!1.31e-11!83;UBERON:0003059!1.31e-11!83;UBERON:0007282!1.31e-11!83;UBERON:0009618!1.31e-11!83;UBERON:0007285!1.31e-11!83;UBERON:0004290!1.51e-11!70;UBERON:0002385!2.63e-11!63;UBERON:0001015!2.63e-11!63;UBERON:0000383!2.63e-11!63;UBERON:0002204!5.42e-11!167;UBERON:0005256!6.85e-11!143;UBERON:0004573!6.69e-10!33;UBERON:0004571!6.69e-10!33;UBERON:0002100!9.26e-10!216;UBERON:0000055!9.59e-10!69;UBERON:0000486!1.02e-09!82;UBERON:0000490!2.73e-09!138;UBERON:0001981!3.13e-09!60;UBERON:0007500!3.13e-09!60;UBERON:0004537!3.13e-09!60;UBERON:0006965!3.13e-09!60;UBERON:0003914!4.57e-08!118;UBERON:0003104!1.95e-07!238;UBERON:0009142!1.95e-07!238;UBERON:0004872!4.96e-07!84;UBERON:0004535!8.39e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;2.94e-08;4!UBERON:0001637;9.60e-07;42!UBERON:0003509;9.60e-07;42!UBERON:0004572;9.60e-07;42 | |||
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| ||
|short_description=p16@CD63 | |short_description=p16@CD63 | ||
}} | }} |
Latest revision as of 08:14, 19 September 2015
Short description: | p16@CD63 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CD63_5end |
Coexpression cluster: | C2219_Smooth_Mesenchymal_Pericytes_mesenchymal_Melanocyte_Preadipocyte_Monocytederived |
Association with transcript: | 2bp_to_uc001shm.2_5end |
EntrezGene: | CD63 |
HGNC: | 1692 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.05e-19 | 43 |
smooth muscle myoblast | 4.05e-19 | 43 |
vascular associated smooth muscle cell | 4.39e-17 | 32 |
muscle precursor cell | 1.48e-16 | 58 |
myoblast | 1.48e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.48e-16 | 58 |
multi fate stem cell | 1.85e-13 | 427 |
muscle cell | 1.98e-13 | 55 |
somatic stem cell | 5.77e-13 | 433 |
stem cell | 2.50e-12 | 441 |
electrically responsive cell | 1.86e-11 | 61 |
electrically active cell | 1.86e-11 | 61 |
mesodermal cell | 5.72e-11 | 121 |
smooth muscle cell of the umbilical artery | 1.17e-08 | 4 |
mesenchymal stem cell of the bone marrow | 1.01e-07 | 6 |
light melanocyte | 5.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.17e-10 | 14 |
cell type benign neoplasm | 5.81e-07 | 3 |
leiomyoma | 5.81e-07 | 3 |