FFCP PHASE1:Hg19::chrX:12924732..12924745,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:12924732..12924745,+ to FFCP PHASE1:Hg19::chrX:12924732..12924745,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51311 | |EntrezGene=51311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15632 | |HGNC=15632 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR97 | |UniProt=Q9NR97 | ||
|association_with_transcript=0bp_to_ENST00000218032,NM_138636_5end | |||
|cluster_id=chrX:12924732..12924745,+ | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_1_at_TLR8_5end | |||
|id=chrX:12924732..12924745,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.18e-49!76;CL:0002194!6.77e-44!63;CL:0000576!6.77e-44!63;CL:0000040!6.77e-44!63;CL:0000559!6.77e-44!63;CL:0002009!2.51e-43!65;CL:0000557!2.62e-41!71;CL:0002057!1.04e-40!42;CL:0000738!1.63e-40!140;CL:0000839!1.95e-40!70;CL:0000763!4.55e-37!112;CL:0000049!4.55e-37!112;CL:0000860!1.10e-36!45;CL:0000037!9.29e-35!172;CL:0000566!9.29e-35!172;CL:0002087!3.75e-33!119;CL:0000988!1.43e-31!182;CL:0002032!1.43e-31!165;CL:0000837!1.43e-31!165;CL:0002031!2.69e-30!124;CL:0002393!1.12e-09!9;CL:0002397!1.12e-09!9;CL:0000094!4.27e-09!8;CL:0000081!4.14e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.73e-36;33!CL:0002057;5.73e-36;33!CL:0000473;1.77e-35;39!CL:0000234;1.77e-35;39!CL:0000576;9.07e-32;48!CL:0000766;9.44e-25;69!CL:0000763;2.05e-11;100!CL:0000094;7.17e-11;8!CL:0002087;7.19e-11;104!CL:0000738;1.75e-10;136!CL:0000081;9.41e-09;11!CL:0002393;4.19e-08;6!CL:0002397;4.19e-08;6!CL:0000235;8.16e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.04e-61,72;CL:0002194,4.37e-57,59;CL:0000576,4.37e-57,59;CL:0000040,4.37e-57,59;CL:0000559,4.37e-57,59;CL:0000473,1.33e-56,48;CL:0000234,1.33e-56,48;CL:0002009,2.19e-56,61;CL:0000557,3.17e-51,67;CL:0000860,5.43e-50,42;CL:0002057,5.43e-50,42;CL:0000839,8.36e-49,66;CL:0000738,2.23e-43,136;CL:0002087,9.25e-39,115;CL:0000763,2.10e-36,108;CL:0000049,2.10e-36,108;CL:0002031,4.00e-33,120;CL:0000037,1.19e-32,168;CL:0000988,2.47e-30,177;CL:0002032,5.29e-29,161;CL:0000837,5.29e-29,161;CL:0002393,1.38e-11,9;CL:0002397,1.38e-11,9;CL:0000094,7.20e-11,8;CL:0000081,1.11e-08,11;CL:0000235,8.18e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;8.74e-36;42!CL:0000049;2.30e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.36e-52!115;UBERON:0002390!3.27e-44!102;UBERON:0003061!3.27e-44!102;UBERON:0002193!3.68e-40!112;UBERON:0002371!4.76e-35!80;UBERON:0001474!7.34e-31!86;UBERON:0002405!2.07e-27!115;UBERON:0004765!1.71e-23!101;UBERON:0001434!1.71e-23!101;UBERON:0001049!4.16e-14!57;UBERON:0005068!4.16e-14!57;UBERON:0006241!4.16e-14!57;UBERON:0007135!4.16e-14!57;UBERON:0003081!2.81e-13!216;UBERON:0003080!2.99e-11!42;UBERON:0002780!9.49e-11!41;UBERON:0001890!9.49e-11!41;UBERON:0006240!9.49e-11!41;UBERON:0002616!1.16e-10!59;UBERON:0002204!4.64e-09!167;UBERON:0000178!6.23e-09!15;UBERON:0000179!6.23e-09!15;UBERON:0000463!6.23e-09!15;UBERON:0000955!1.71e-08!69;UBERON:0006238!1.71e-08!69;UBERON:0002020!3.51e-08!34;UBERON:0003528!3.51e-08!34;UBERON:0001017!3.54e-08!82;UBERON:0000479!3.81e-08!787;UBERON:0001893!4.96e-08!34;UBERON:0005743!8.20e-08!86;UBERON:0002791!1.01e-07!33;UBERON:0001869!3.20e-07!32;UBERON:0003075!4.71e-07!86;UBERON:0007284!4.71e-07!86;UBERON:0000062!5.75e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.74e-11;15!UBERON:0000179;4.74e-11;15!UBERON:0000463;4.74e-11;15!UBERON:0002390;9.19e-08;32!UBERON:0007023;4.98e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.26e-56,98;UBERON:0003061,4.26e-56,98;UBERON:0002193,1.15e-51,108;UBERON:0002371,4.58e-44,76;UBERON:0002405,4.63e-41,93;UBERON:0001474,2.87e-39,82;UBERON:0004765,6.81e-34,90;UBERON:0007023,1.23e-31,114;UBERON:0001434,2.00e-28,100;UBERON:0003081,4.97e-20,203;UBERON:0002204,9.83e-12,167;UBERON:0000178,4.69e-11,15;UBERON:0000179,4.69e-11,15;UBERON:0000463,4.69e-11,15;UBERON:0000926,7.46e-09,315;UBERON:0004120,7.46e-09,315;UBERON:0006603,7.46e-09,315;UBERON:0000923,2.11e-07,560;UBERON:0010316,2.11e-07,560;UBERON:0005291,2.11e-07,560;UBERON:0006598,2.11e-07,560;UBERON:0010317,2.11e-07,560;UBERON:0002532,2.11e-07,560;UBERON:0002050,4.13e-07,564;UBERON:0000479,4.69e-07,773 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,0,0,0,0,0,0,0,0,0,0,0,0,27.1421351025744,20.3429580991523,33.7499148829046,0,0,0,0,0,1.46800219667424,41.5496556398908,37.9029005718568,22.3521196837327,152.934268905868,145.104362376503,163.04533431244,112.683635054163,73.307933075629,108.435075350954,75.3070079574418,35.7716062578988,60.7024486954403,332.284713132084,312.516061965503,509.85568763979,62.0542225325913,58.0936215225443,69.0675081631143,49.8842199787902,33.8403626071729,59.3269998935023,52.6464294877952,68.678811794284,63.2943754541051,455.854496858042,345.072127685423,395.962793244873,65.58728793006,28.9366464592481,59.7909359035752,320.844545532861,261.784425046941,438.287088614925,81.7289328555048,93.1742419048539,107.913674117342,147.456189845735,163.280102373153,133.971874479852,172.08746291643,202.138097764667,363.239825935401,79.5185555038084,139.639507393761,141.199390860062,0,7.09980194640771,4.44754626931777,8.96133467389665,0.800791974072025,2.29900975981793,5.2883589822789,1.90810750907073,0,1.17447437874188,0.382273228125229,0,8.40762844472304,2.10707267820062,0,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22995790026868,0,0.950452044448374,12.4977348834551,7.03926361349301,14.9916871862815,17.0479621471692,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,36.0247606956698,39.3533206296344,12.7639642098111,3.33886874027479,4.0039643754609,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,583.78724924176,310.22421131866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.024632374085,45.1628231718729,39.387258006513,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.1358476115929,50.7279662346448,61.1418424500792,0,1.14861935834114,0,0,0,0,0,1.97030760201927,0,0.641715181398742,0,0,0,0.335032530668698,0,650.138096786154,394.893126149313,932.020489717644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.304856124218,36.4556999383462,13.0207620520202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,8.55240396676095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,6.96664125748166,0,0,0,0,162.890682563526,132.282236835631,106.524024001568,105.774908303258,123.408681925858,164.71222104295,135.007859309529,75.3468917479557,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0.228234679033192,0.156679895773023,0,0,0.321176150207399,0,40.8812388182713,0.687010689511529,0,0.447352215784832,0.166849141711909,0.19538809540204,0,0,0,0,0,0,14.3578015686456,0,5.57216921387392,0,0,1.18785872333055,0,3.97659059106519,1.54736358051564,0,0,0,0.796991953004279,8.01223355040328,0,0,0,0,0,0,0,2.76201535783414,35.922463852041,0,0.969332746095218,2.50473865036998,0,0,0,2.89999830173917,0,0,0,0,0,0,4.42870692906919,1.4471572635049,0,0.774054819518572,0.591095237907095,0,0,0,2.23155749661011,0,0,0,0,0.31900115973192,0.274792780205587,2.13213910407454,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0.995261931078505,2.65372693510018,2.4441205797345,0,0,0,1.14581926067151,0,0.468528891450678,0,0,0,0.394584402849391,0,0,27.1070426606213,0,0,0,0,0,0,0,0,0,0,0,5.06707337901887,0,0,0,0,1.84279131327997,0,0.677942222341597,0,0,0.696418755514666,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,3.60252173225874,3.28572909340783,2.55493176133945,0,0,0,0.916641696046735,0,0.599037001496973,1.71690419254628,6.02562935093056,4.16537529417703,0,0,0,0,0,0,0,3.97614844904652,1.90684768556206,0,0,0,1.799791132412,0,0.607495566580247,0,3.30983970656632,0.891727998294968,0,0,0,7.14695326373367,3.31045985182716,0,0,0,0,0,0,0,0,5.42243264608905,1.32506888912221,2.19781025814636,1.45455861916959,0,0,28.4054517430068,8.48903247538196,19.8834746566654,48.1281041157592,0,0,0,0,0,0.612691153526923,0,0,1.77213635993397,1.58634144372552,2.3786276834235,4.58727356552057,3.54972964917927,1.73869928235874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0.389720617678777,0.797189041880179,0.654261577023377,0,0,0,0,1.60037594541211,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,1.75597244962866,0.82046545696302,0,0.207471757392654,0.484426936895553,2.85538840518309,0,0,0,0,0,0,0,2.33152017882697,0,0,0,0,0,0.675375846183947,0.781078098613847,1.2401207790071,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0,0.535701835878287,2.69026977775059,0.606965604236632,1.36597314810779,6.03176117105944,0,0,1.42736439251347,0.460409414939944,0,0,2.74725824976799,2.67096502857203,0,1.82631744101899,0,0,2.287249413653,0,0,0,0,0,0,0,1.29068207646083,0,0,0.423387050190929,0,0.31020638566432,0,0,0,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| ||
|short_description=p1@TLR8 | |||
}} | }} |
Latest revision as of 09:38, 19 September 2015
Short description: | p1@TLR8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TLR8_5end |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | 0bp_to_ENST00000218032, NM_138636_5end |
EntrezGene: | TLR8 |
HGNC: | 15632 |
UniProt: | Q9NR97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.04e-61 | 72 |
monopoietic cell | 4.37e-57 | 59 |
monocyte | 4.37e-57 | 59 |
monoblast | 4.37e-57 | 59 |
promonocyte | 4.37e-57 | 59 |
defensive cell | 1.33e-56 | 48 |
phagocyte | 1.33e-56 | 48 |
macrophage dendritic cell progenitor | 2.19e-56 | 61 |
granulocyte monocyte progenitor cell | 3.17e-51 | 67 |
classical monocyte | 5.43e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.43e-50 | 42 |
myeloid lineage restricted progenitor cell | 8.36e-49 | 66 |
leukocyte | 2.23e-43 | 136 |
nongranular leukocyte | 9.25e-39 | 115 |
myeloid cell | 2.10e-36 | 108 |
common myeloid progenitor | 2.10e-36 | 108 |
hematopoietic lineage restricted progenitor cell | 4.00e-33 | 120 |
hematopoietic stem cell | 1.19e-32 | 168 |
hematopoietic cell | 2.47e-30 | 177 |
hematopoietic oligopotent progenitor cell | 5.29e-29 | 161 |
hematopoietic multipotent progenitor cell | 5.29e-29 | 161 |
intermediate monocyte | 1.38e-11 | 9 |
CD14-positive, CD16-positive monocyte | 1.38e-11 | 9 |
granulocyte | 7.20e-11 | 8 |
blood cell | 1.11e-08 | 11 |
macrophage | 8.18e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.26e-56 | 98 |
blood island | 4.26e-56 | 98 |
hemolymphoid system | 1.15e-51 | 108 |
bone marrow | 4.58e-44 | 76 |
immune system | 4.63e-41 | 93 |
bone element | 2.87e-39 | 82 |
skeletal element | 6.81e-34 | 90 |
adult organism | 1.23e-31 | 114 |
skeletal system | 2.00e-28 | 100 |
lateral plate mesoderm | 4.97e-20 | 203 |
musculoskeletal system | 9.83e-12 | 167 |
blood | 4.69e-11 | 15 |
haemolymphatic fluid | 4.69e-11 | 15 |
organism substance | 4.69e-11 | 15 |
mesoderm | 7.46e-09 | 315 |
mesoderm-derived structure | 7.46e-09 | 315 |
presumptive mesoderm | 7.46e-09 | 315 |
germ layer | 2.11e-07 | 560 |
germ layer / neural crest | 2.11e-07 | 560 |
embryonic tissue | 2.11e-07 | 560 |
presumptive structure | 2.11e-07 | 560 |
germ layer / neural crest derived structure | 2.11e-07 | 560 |
epiblast (generic) | 2.11e-07 | 560 |
embryonic structure | 4.13e-07 | 564 |
tissue | 4.69e-07 | 773 |