FFCP PHASE1:Hg19::chr22:24552402..24552418,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23523 | |EntrezGene=23523 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24187 | |HGNC=24187 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-82bp_to_ENST00000495121_5end | |association_with_transcript=-82bp_to_ENST00000495121_5end | ||
|cluster_id=chr22:24552402..24552418,+ | |||
|description=CAGE_peak_8_at_CABIN1_5end | |description=CAGE_peak_8_at_CABIN1_5end | ||
|id=chr22:24552402..24552418,+ | |id=chr22:24552402..24552418,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.57e-09!18;CL:0000789!4.57e-09!18;CL:0002420!4.57e-09!18;CL:0002419!4.57e-09!18;CL:0000790!4.57e-09!18;CL:0000625!1.09e-08!11 | |ontology_enrichment_celltype=CL:0000791!4.57e-09!18;CL:0000789!4.57e-09!18;CL:0002420!4.57e-09!18;CL:0002419!4.57e-09!18;CL:0000790!4.57e-09!18;CL:0000625!1.09e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000625;6.77e-09;11!CL:0000791;8.56e-09;18!CL:0000789;8.56e-09;18!CL:0002419;8.56e-09;18!CL:0000084;1.76e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.08e-09,11;CL:0000791,6.64e-09,18;CL:0000789,6.64e-09,18;CL:0002420,6.64e-09,18;CL:0002419,6.64e-09,18;CL:0000790,6.64e-09,18;CL:0000084,1.49e-07,25;CL:0000827,1.49e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.04e-09;3!CL:0000790;8.56e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.08e-08!94;UBERON:0001016!1.08e-08!94;UBERON:0001017!1.30e-08!82;UBERON:0005743!2.31e-08!86;UBERON:0001950!6.82e-08!20;UBERON:0002619!1.42e-07!22;UBERON:0001049!1.71e-07!57;UBERON:0005068!1.71e-07!57;UBERON:0006241!1.71e-07!57;UBERON:0007135!1.71e-07!57;UBERON:0000955!1.90e-07!69;UBERON:0006238!1.90e-07!69;UBERON:0002616!2.00e-07!59;UBERON:0001869!2.57e-07!32;UBERON:0001893!4.04e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;5.70e-17;20!UBERON:0002619;3.03e-15;22!UBERON:0001869;3.24e-14;32!UBERON:0001893;2.37e-13;34!UBERON:0000956;3.70e-13;25!UBERON:0000203;3.70e-13;25!UBERON:0002791;3.83e-12;32!UBERON:0003528;1.76e-11;34!UBERON:0002020;1.76e-11;34!UBERON:0002780;8.51e-09;41!UBERON:0001890;8.51e-09;41!UBERON:0000200;1.22e-07;6!UBERON:0002370;1.94e-07;2!UBERON:0005058;1.94e-07;2!UBERON:0009113;1.94e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.36e-17,20;UBERON:0001869,2.82e-16,32;UBERON:0002619,1.37e-15,22;UBERON:0001893,4.00e-15,34;UBERON:0002791,4.90e-14,32;UBERON:0000956,1.85e-13,25;UBERON:0000203,1.85e-13,25;UBERON:0003528,4.93e-13,34;UBERON:0002020,4.93e-13,34;UBERON:0000073,7.46e-13,53;UBERON:0002616,7.46e-13,53;UBERON:0001017,3.33e-12,81;UBERON:0002780,5.72e-12,41;UBERON:0001890,5.72e-12,41;UBERON:0003080,5.72e-12,41;UBERON:0006240,5.72e-12,41;UBERON:0001049,6.20e-12,56;UBERON:0005068,6.20e-12,56;UBERON:0006241,6.20e-12,56;UBERON:0007135,6.20e-12,56;UBERON:0001016,1.34e-11,89;UBERON:0000955,2.01e-11,68;UBERON:0006238,2.01e-11,68;UBERON:0002346,3.79e-09,86;UBERON:0007023,6.06e-09,114;UBERON:0003056,5.03e-08,61;UBERON:0003075,9.45e-08,82;UBERON:0007284,9.45e-08,82;UBERON:0000200,9.46e-08,6 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.738726348460727,0.816002764977012,0.626909442956176,0,0,0,0.229240217243854,0.492603536699674,0.157421562627358,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,1.0429658368404,0.217188844705117,0,0,0,0.211255286311942,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,1.52909291250092,1.32171328579026,1.68152568894461,0.790152254325231,0,1.57204305099666,1.02800749499755,0,0.977766799900771,0.473447805734733,0,0,0,0.664601683750863,0.541607727530031,0.128091319725675,0,0.328875809207352,1.10540007114339,0.579606171470105,0.296573126324121,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0.506039384039006,0.637130828648193,1.95325036156926,0.950452044448374,0.451725357233318,2.68771883424279,1.24930726552346,0.473554504088034,1.64225599384209,2.62088766192152,2.40696176205157,0.868946423296794,0,0,0,0.361439152384566,0.50133791063589,0.289693037921647,0,0,0.756278537312543,1.33037638477538,0.614843499851882,0.392937226493138,0,0,0.97364218096405,1.39303789839414,0.664789802594326,0,0,0,0.39752481473341,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0,1.31780417436063,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0.286836620748814,0.709336764396714,0,1.06748995729705,0.74000264525148,0,0,0.163461903113459,0,0.576175924479999,0,0.936480230490962,1.1409436430889,1.34503812496621,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0.554128230968366,0,0,0.150238058906597,0.226864366320042,0.89694817844431,0.213557388818567,0.211931901159562,0.900273288253207,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0,0,0.184099797284599,0.969876340912871,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0.383382679165211,0.492663237895943,13.4714104040236,0.207328115540772,0,0.25248486685276,0.126995788584338,0,0,1.71072446022705,0.102827492703324,0.901029173531752,0.285826432630578,0.448524337381443,0.43596006883328,1.24675085895615,0.387815147273333,0,0,0.797814349754612,0,1.80045161983499,0,2.1313774321288,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.358121926479791,0.112085143993527,2.56139988262505,1.2937654491571,0.641715181398742,1.52456774533478,0,0.773288812777695,0,1.27587750330633,0,0,0.414415513436035,0.613457458595699,0.500170521059677,0.271265023699736,0.831883446123229,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0.173767228936166,0,0.343143423810856,0.206768026122887,0,1.28073069364133,0,1.66435439510497,0,0,0,0,0,0,0.321707842287215,1.48418066444991,0.462629081407967,0.355123450626254,0.410635780069046,0,0.348631135379878,0,0,0,0,0.364182336013434,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.827019434907183,0.322260734604821,0.145016693914229,0.596586391912706,0,0,0,0,0,0,0,0,0,0,1.73986598415015,0.18532421910392,0,0,0,0.38126038784765,1.27948895655667,0,0.636406495851874,0,0,0,0,0.606547444719948,0,0,1.46290121726877,0,0,0,0,0,0,0,0.438450885253763,1.15755106853338,0,0,0,0.563391205064483,0.143411352204052,0.294747123039363,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,1.13929437434833,0.714695326373367,0.411362273086194,1.29694662238543,0.540031437238115,0,0,0,0,0.185803175125719,0.144269212976445,0,0,0.798317485731266,0.383010740264733,0.423347165447766,0,2.52717460302113,2.28234679033192,0,0,1.01575066680962,0.1605880751037,0,0,0.343505344755765,0.307240764308458,0,0,0,0.835218521685727,0,0,0.33307196799782,0,0,0.293016358543788,0,0,0,0,0,0,0,1.96937182974718,0,0,0,0.597743964753209,0.276283915531148,0,0.613612095012929,0.123084805461069,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,1.39152147242777,5.98841394003583,0,0.0874599999961957,0,0,0,0,0,0,0,2.65722415744152,0.361789315876224,1.52581736317083,1.76926815889959,2.06883333267483,1.09692698576986,0,0,0.153900517007594,0,0,0,0,0,0.641183153813036,0.533034776018635,0,0.31396051279005,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0.337005664903385,0,0.937057782901357,0.182454789215666,0,0,0,1.20990716048664,0.61214552326098,0.505492637027904,0,0,0,0,0.313932918407225,0,0,0.1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| ||
|short_description=p8@CABIN1 | |short_description=p8@CABIN1 | ||
}} | }} |
Latest revision as of 10:11, 19 September 2015
Short description: | p8@CABIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CABIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -82bp_to_ENST00000495121_5end |
EntrezGene: | CABIN1 |
HGNC: | 24187 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.08e-09 | 11 |
mature alpha-beta T cell | 6.64e-09 | 18 |
alpha-beta T cell | 6.64e-09 | 18 |
immature T cell | 6.64e-09 | 18 |
mature T cell | 6.64e-09 | 18 |
immature alpha-beta T cell | 6.64e-09 | 18 |
T cell | 1.49e-07 | 25 |
pro-T cell | 1.49e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neocortex | 2.36e-17 | 20 |
cerebral hemisphere | 2.82e-16 | 32 |
regional part of cerebral cortex | 1.37e-15 | 22 |
telencephalon | 4.00e-15 | 34 |
regional part of telencephalon | 4.90e-14 | 32 |
cerebral cortex | 1.85e-13 | 25 |
pallium | 1.85e-13 | 25 |
brain grey matter | 4.93e-13 | 34 |
gray matter | 4.93e-13 | 34 |
regional part of nervous system | 7.46e-13 | 53 |
regional part of brain | 7.46e-13 | 53 |
central nervous system | 3.33e-12 | 81 |
regional part of forebrain | 5.72e-12 | 41 |
forebrain | 5.72e-12 | 41 |
anterior neural tube | 5.72e-12 | 41 |
future forebrain | 5.72e-12 | 41 |
neural tube | 6.20e-12 | 56 |
neural rod | 6.20e-12 | 56 |
future spinal cord | 6.20e-12 | 56 |
neural keel | 6.20e-12 | 56 |
nervous system | 1.34e-11 | 89 |
brain | 2.01e-11 | 68 |
future brain | 2.01e-11 | 68 |
neurectoderm | 3.79e-09 | 86 |
adult organism | 6.06e-09 | 114 |
pre-chordal neural plate | 5.03e-08 | 61 |
neural plate | 9.45e-08 | 82 |
presumptive neural plate | 9.45e-08 | 82 |
gyrus | 9.46e-08 | 6 |