FFCP PHASE1:Hg19::chr6:56819429..56819490,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100652766,667 | |EntrezGene=100652766,667 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1090 | |HGNC=1090 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T0V7 | |UniProt=Q5T0V7 | ||
|association_with_transcript=-3bp_to_ENST00000449297_5end | |association_with_transcript=-3bp_to_ENST00000449297_5end | ||
|cluster_id=chr6:56819429..56819490,- | |||
|coexpression_cluster_id=C2866 | |||
|description=CAGE_peak_10_at_DST_5end | |description=CAGE_peak_10_at_DST_5end | ||
|id=chr6:56819429..56819490,- | |id=chr6:56819429..56819490,- | ||
|ontology_enrichment_celltype=CL:0000055!1.70e-23!180;CL:0000057!9.90e-16!75;CL:0002620!2.61e-11!23 | |ontology_enrichment_celltype=CL:0000055!1.70e-23!180;CL:0000057!9.90e-16!75;CL:0002620!2.61e-11!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.69e-13;23!CL:0000057;9.06e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.03e-17,76;CL:0002620,2.83e-13,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.26e-24!82;UBERON:0000955!1.57e-23!69;UBERON:0006238!1.57e-23!69;UBERON:0001049!8.24e-23!57;UBERON:0005068!8.24e-23!57;UBERON:0006241!8.24e-23!57;UBERON:0007135!8.24e-23!57;UBERON:0005743!1.61e-22!86;UBERON:0002616!4.43e-22!59;UBERON:0000073!6.09e-22!94;UBERON:0001016!6.09e-22!94;UBERON:0002780!8.59e-18!41;UBERON:0001890!8.59e-18!41;UBERON:0006240!8.59e-18!41;UBERON:0000033!4.13e-17!123;UBERON:0003080!9.20e-17!42;UBERON:0000475!4.75e-16!365;UBERON:0002020!6.56e-16!34;UBERON:0003528!6.56e-16!34;UBERON:0001893!1.20e-15!34;UBERON:0000153!1.69e-15!129;UBERON:0007811!1.69e-15!129;UBERON:0003075!2.11e-15!86;UBERON:0007284!2.11e-15!86;UBERON:0002791!4.58e-15!33;UBERON:0001869!7.61e-15!32;UBERON:0004121!1.26e-14!169;UBERON:0002346!6.71e-14!90;UBERON:0000924!1.12e-13!173;UBERON:0006601!1.12e-13!173;UBERON:0000956!1.56e-11!25;UBERON:0000203!1.56e-11!25;UBERON:0002619!4.04e-11!22;UBERON:0001950!1.90e-10!20;UBERON:0003056!3.95e-10!61;UBERON:0000477!1.39e-08!286;UBERON:0000914!2.41e-08!83;UBERON:0002329!2.41e-08!83;UBERON:0003077!2.41e-08!83;UBERON:0003059!2.41e-08!83;UBERON:0007282!2.41e-08!83;UBERON:0009618!2.41e-08!83;UBERON:0007285!2.41e-08!83;UBERON:0000025!2.37e-07!194;UBERON:0003076!2.82e-07!15;UBERON:0003057!2.82e-07!15;UBERON:0000483!4.47e-07!309;UBERON:0000467!4.55e-07!625;UBERON:0000480!5.19e-07!626 | |ontology_enrichment_uberon=UBERON:0001017!9.26e-24!82;UBERON:0000955!1.57e-23!69;UBERON:0006238!1.57e-23!69;UBERON:0001049!8.24e-23!57;UBERON:0005068!8.24e-23!57;UBERON:0006241!8.24e-23!57;UBERON:0007135!8.24e-23!57;UBERON:0005743!1.61e-22!86;UBERON:0002616!4.43e-22!59;UBERON:0000073!6.09e-22!94;UBERON:0001016!6.09e-22!94;UBERON:0002780!8.59e-18!41;UBERON:0001890!8.59e-18!41;UBERON:0006240!8.59e-18!41;UBERON:0000033!4.13e-17!123;UBERON:0003080!9.20e-17!42;UBERON:0000475!4.75e-16!365;UBERON:0002020!6.56e-16!34;UBERON:0003528!6.56e-16!34;UBERON:0001893!1.20e-15!34;UBERON:0000153!1.69e-15!129;UBERON:0007811!1.69e-15!129;UBERON:0003075!2.11e-15!86;UBERON:0007284!2.11e-15!86;UBERON:0002791!4.58e-15!33;UBERON:0001869!7.61e-15!32;UBERON:0004121!1.26e-14!169;UBERON:0002346!6.71e-14!90;UBERON:0000924!1.12e-13!173;UBERON:0006601!1.12e-13!173;UBERON:0000956!1.56e-11!25;UBERON:0000203!1.56e-11!25;UBERON:0002619!4.04e-11!22;UBERON:0001950!1.90e-10!20;UBERON:0003056!3.95e-10!61;UBERON:0000477!1.39e-08!286;UBERON:0000914!2.41e-08!83;UBERON:0002329!2.41e-08!83;UBERON:0003077!2.41e-08!83;UBERON:0003059!2.41e-08!83;UBERON:0007282!2.41e-08!83;UBERON:0009618!2.41e-08!83;UBERON:0007285!2.41e-08!83;UBERON:0000025!2.37e-07!194;UBERON:0003076!2.82e-07!15;UBERON:0003057!2.82e-07!15;UBERON:0000483!4.47e-07!309;UBERON:0000467!4.55e-07!625;UBERON:0000480!5.19e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.99e-16;34!UBERON:0002020;1.99e-16;34!UBERON:0001893;3.23e-16;34!UBERON:0001869;4.63e-16;32!UBERON:0000073;4.67e-16;53!UBERON:0002616;4.67e-16;53!UBERON:0002791;5.94e-16;32!UBERON:0002780;2.14e-15;41!UBERON:0001890;2.14e-15;41!UBERON:0002619;5.47e-14;22!UBERON:0000956;9.71e-14;25!UBERON:0000203;9.71e-14;25!UBERON:0001017;2.71e-13;75!UBERON:0001950;3.83e-13;20!UBERON:0000955;6.65e-13;68!UBERON:0001016;1.00e-10;83!UBERON:0000125;4.33e-07;9!UBERON:0002308;4.33e-07;9!UBERON:0002420;9.62e-07;9!UBERON:0007245;9.62e-07;9!UBERON:0010009;9.62e-07;9!UBERON:0010011;9.62e-07;9!UBERON:0000454;9.62e-07;9 | |||
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| ||
|short_description=p10@DST | |short_description=p10@DST | ||
}} | }} |
Latest revision as of 10:15, 19 September 2015
Short description: | p10@DST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_DST_5end |
Coexpression cluster: | C2866_Fibroblast_Preadipocyte_rhabdomyosarcoma_Myoblast_mesenchymal_Smooth_liposarcoma |
Association with transcript: | -3bp_to_ENST00000449297_5end |
EntrezGene: | 100652766,667 |
HGNC: | 1090 |
UniProt: | Q5T0V7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.03e-17 | 76 |
skin fibroblast | 2.83e-13 | 23 |