FFCP PHASE1:Hg19::chr12:57824739..57824834,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22864 | |EntrezGene=22864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29167 | |HGNC=29167 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2K5,B5MCU0 | |UniProt=Q9Y2K5,B5MCU0 | ||
|association_with_transcript=0bp_to_ENST00000347140,ENST00000402412,uc001sns.2,uc001snt.2,uc009zpo.1_5end | |association_with_transcript=0bp_to_ENST00000347140,ENST00000402412,uc001sns.2,uc001snt.2,uc009zpo.1_5end | ||
|cluster_id=chr12:57824739..57824834,- | |||
|description=CAGE_peak_1_at_R3HDM2_5end | |description=CAGE_peak_1_at_R3HDM2_5end | ||
|id=chr12:57824739..57824834,- | |id=chr12:57824739..57824834,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.73e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.51e-41!115;UBERON:0001049!2.72e-28!57;UBERON:0005068!2.72e-28!57;UBERON:0006241!2.72e-28!57;UBERON:0007135!2.72e-28!57;UBERON:0002616!4.27e-23!59;UBERON:0000073!3.61e-22!94;UBERON:0001016!3.61e-22!94;UBERON:0000955!5.11e-22!69;UBERON:0006238!5.11e-22!69;UBERON:0003080!1.68e-21!42;UBERON:0002780!3.57e-21!41;UBERON:0001890!3.57e-21!41;UBERON:0006240!3.57e-21!41;UBERON:0001017!9.01e-21!82;UBERON:0005743!2.22e-20!86;UBERON:0002346!1.06e-19!90;UBERON:0003075!2.91e-19!86;UBERON:0007284!2.91e-19!86;UBERON:0001893!2.81e-17!34;UBERON:0002020!3.49e-17!34;UBERON:0003528!3.49e-17!34;UBERON:0002791!9.63e-17!33;UBERON:0001869!3.83e-16!32;UBERON:0002619!3.66e-15!22;UBERON:0003056!4.33e-14!61;UBERON:0001950!6.70e-14!20;UBERON:0000924!8.75e-14!173;UBERON:0006601!8.75e-14!173;UBERON:0000153!1.26e-13!129;UBERON:0007811!1.26e-13!129;UBERON:0004121!2.80e-13!169;UBERON:0000033!2.58e-12!123;UBERON:0000956!3.28e-12!25;UBERON:0000203!3.28e-12!25;UBERON:0003076!6.21e-08!15;UBERON:0003057!6.21e-08!15;UBERON:0004732!7.76e-07!13 | |ontology_enrichment_uberon=UBERON:0007023!8.51e-41!115;UBERON:0001049!2.72e-28!57;UBERON:0005068!2.72e-28!57;UBERON:0006241!2.72e-28!57;UBERON:0007135!2.72e-28!57;UBERON:0002616!4.27e-23!59;UBERON:0000073!3.61e-22!94;UBERON:0001016!3.61e-22!94;UBERON:0000955!5.11e-22!69;UBERON:0006238!5.11e-22!69;UBERON:0003080!1.68e-21!42;UBERON:0002780!3.57e-21!41;UBERON:0001890!3.57e-21!41;UBERON:0006240!3.57e-21!41;UBERON:0001017!9.01e-21!82;UBERON:0005743!2.22e-20!86;UBERON:0002346!1.06e-19!90;UBERON:0003075!2.91e-19!86;UBERON:0007284!2.91e-19!86;UBERON:0001893!2.81e-17!34;UBERON:0002020!3.49e-17!34;UBERON:0003528!3.49e-17!34;UBERON:0002791!9.63e-17!33;UBERON:0001869!3.83e-16!32;UBERON:0002619!3.66e-15!22;UBERON:0003056!4.33e-14!61;UBERON:0001950!6.70e-14!20;UBERON:0000924!8.75e-14!173;UBERON:0006601!8.75e-14!173;UBERON:0000153!1.26e-13!129;UBERON:0007811!1.26e-13!129;UBERON:0004121!2.80e-13!169;UBERON:0000033!2.58e-12!123;UBERON:0000956!3.28e-12!25;UBERON:0000203!3.28e-12!25;UBERON:0003076!6.21e-08!15;UBERON:0003057!6.21e-08!15;UBERON:0004732!7.76e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.64e-15;41!UBERON:0001890;1.64e-15;41!UBERON:0002619;3.68e-15;22!UBERON:0000073;4.39e-15;53!UBERON:0002616;4.39e-15;53!UBERON:0001893;1.16e-14;34!UBERON:0003528;1.33e-14;34!UBERON:0002020;1.33e-14;34!UBERON:0002791;1.50e-14;32!UBERON:0001869;1.58e-14;32!UBERON:0001950;6.78e-14;20!UBERON:0000956;3.18e-12;25!UBERON:0000203;3.18e-12;25!UBERON:0007023;5.90e-11;114!UBERON:0001017;2.58e-10;75!UBERON:0000955;6.24e-10;68!UBERON:0001016;7.77e-10;83!UBERON:0004732;7.49e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.34e-40,114;UBERON:0001049,5.96e-28,56;UBERON:0005068,5.96e-28,56;UBERON:0006241,5.96e-28,56;UBERON:0007135,5.96e-28,56;UBERON:0000073,2.65e-26,53;UBERON:0002616,2.65e-26,53;UBERON:0001016,3.42e-22,89;UBERON:0000955,1.15e-21,68;UBERON:0006238,1.15e-21,68;UBERON:0002780,3.57e-21,41;UBERON:0001890,3.57e-21,41;UBERON:0003080,3.57e-21,41;UBERON:0006240,3.57e-21,41;UBERON:0001017,2.00e-20,81;UBERON:0002346,5.45e-19,86;UBERON:0003075,1.48e-18,82;UBERON:0007284,1.48e-18,82;UBERON:0001893,2.81e-17,34;UBERON:0003528,3.49e-17,34;UBERON:0002020,3.49e-17,34;UBERON:0002791,3.60e-16,32;UBERON:0001869,3.83e-16,32;UBERON:0002619,3.66e-15,22;UBERON:0003056,3.53e-14,61;UBERON:0001950,6.70e-14,20;UBERON:0004121,3.33e-13,171;UBERON:0000924,3.33e-13,171;UBERON:0006601,3.33e-13,171;UBERON:0010371,3.53e-13,104;UBERON:0000956,3.28e-12,25;UBERON:0000203,3.28e-12,25;UBERON:0010314,5.42e-10,132;UBERON:0011216,7.17e-10,223;UBERON:0003076,6.21e-08,15;UBERON:0003057,6.21e-08,15;UBERON:0004732,7.76e-07,13 | |||
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| ||
|short_description=p1@R3HDM2 | |short_description=p1@R3HDM2 | ||
}} | }} |
Latest revision as of 14:13, 19 September 2015
Short description: | p1@R3HDM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_R3HDM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000347140, ENST00000402412, uc001sns.2, uc001snt.2, uc009zpo.1_5end |
EntrezGene: | R3HDM2 |
HGNC: | 29167 |
UniProt: | Q9Y2K5B5MCU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data