FFCP PHASE1:Hg19::chrX:135579363..135579416,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:135579363..135579416,+
|short_description=p1@HTATSF1
|description=CAGE_peak_1_at_HTATSF1_5end
|association_with_transcript=0bp_to_ENST00000425695,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27336 | |EntrezGene=27336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5276 | |HGNC=5276 | ||
|TSSclassifier=strong | |||
|UniProt=Q5H919,Q5H918 | |UniProt=Q5H919,Q5H918 | ||
|association_with_transcript=0bp_to_ENST00000425695,ENST00000448450_5end | |||
|cluster_id=chrX:135579363..135579416,+ | |||
|description=CAGE_peak_1_at_HTATSF1_5end | |||
|id=chrX:135579363..135579416,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.89e-07;82 | |||
|ontology_enrichment_disease=DOID:162!2.18e-33!235;DOID:14566!8.89e-32!239;DOID:0050687!5.22e-20!143;DOID:0050686!2.17e-15!137;DOID:305!1.10e-14!106;DOID:8692!7.00e-12!31;DOID:1240!3.95e-10!39;DOID:2531!6.25e-10!51;DOID:0060083!6.25e-10!51;DOID:3095!1.74e-07!22;DOID:2994!1.74e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.51e-11;31!DOID:1240;1.72e-08;39!DOID:3095;1.65e-07;22!DOID:2994;1.65e-07;22!DOID:2531;8.73e-07;51!DOID:0060083;8.73e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.18e-33,235;DOID:14566,8.89e-32,239;DOID:0050687,5.22e-20,143;DOID:0050686,2.17e-15,137;DOID:305,1.10e-14,106;DOID:8692,7.00e-12,31;DOID:1240,3.95e-10,39;DOID:2531,6.25e-10,51;DOID:0060083,6.25e-10,51;DOID:3095,1.74e-07,22;DOID:2994,1.74e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.64e-17!94;UBERON:0001016!1.64e-17!94;UBERON:0001017!5.32e-16!82;UBERON:0005743!2.06e-15!86;UBERON:0007023!8.47e-13!115;UBERON:0001049!3.50e-12!57;UBERON:0005068!3.50e-12!57;UBERON:0006241!3.50e-12!57;UBERON:0007135!3.50e-12!57;UBERON:0000955!5.91e-12!69;UBERON:0006238!5.91e-12!69;UBERON:0000924!2.48e-11!173;UBERON:0006601!2.48e-11!173;UBERON:0003080!7.96e-11!42;UBERON:0004121!1.26e-10!169;UBERON:0002780!1.97e-10!41;UBERON:0001890!1.97e-10!41;UBERON:0006240!1.97e-10!41;UBERON:0002616!3.83e-10!59;UBERON:0002346!2.82e-09!90;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0002020!4.70e-08!34;UBERON:0003528!4.70e-08!34;UBERON:0001893!9.23e-08!34;UBERON:0002791!1.18e-07!33;UBERON:0001869!2.67e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.04e-08;41!UBERON:0001890;6.04e-08;41!UBERON:0003528;5.09e-07;34!UBERON:0002020;5.09e-07;34!UBERON:0002791;6.37e-07;32!UBERON:0001869;8.05e-07;32!UBERON:0001016;8.35e-07;83!UBERON:0001893;9.47e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.03e-17,89;UBERON:0001017,1.31e-15,81;UBERON:0007023,1.00e-12,114;UBERON:0001049,8.49e-12,56;UBERON:0005068,8.49e-12,56;UBERON:0006241,8.49e-12,56;UBERON:0007135,8.49e-12,56;UBERON:0000955,1.37e-11,68;UBERON:0006238,1.37e-11,68;UBERON:0011216,3.59e-11,223;UBERON:0000073,1.10e-10,53;UBERON:0002616,1.10e-10,53;UBERON:0002780,1.97e-10,41;UBERON:0001890,1.97e-10,41;UBERON:0003080,1.97e-10,41;UBERON:0006240,1.97e-10,41;UBERON:0004121,2.09e-10,171;UBERON:0000924,2.09e-10,171;UBERON:0006601,2.09e-10,171;UBERON:0002346,8.65e-09,86;UBERON:0003075,4.55e-08,82;UBERON:0007284,4.55e-08,82;UBERON:0003528,4.70e-08,34;UBERON:0002020,4.70e-08,34;UBERON:0001893,9.23e-08,34;UBERON:0002791,2.19e-07,32;UBERON:0001869,2.67e-07,32 | |||
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| ||
|short_description=p1@HTATSF1 | |||
}} | }} |
Latest revision as of 14:41, 19 September 2015
Short description: | p1@HTATSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HTATSF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000425695, ENST00000448450_5end |
EntrezGene: | HTATSF1 |
HGNC: | 5276 |
UniProt: | Q5H919Q5H918 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.03e-17 | 89 |
central nervous system | 1.31e-15 | 81 |
adult organism | 1.00e-12 | 114 |
neural tube | 8.49e-12 | 56 |
neural rod | 8.49e-12 | 56 |
future spinal cord | 8.49e-12 | 56 |
neural keel | 8.49e-12 | 56 |
brain | 1.37e-11 | 68 |
future brain | 1.37e-11 | 68 |
organ system subdivision | 3.59e-11 | 223 |
regional part of nervous system | 1.10e-10 | 53 |
regional part of brain | 1.10e-10 | 53 |
regional part of forebrain | 1.97e-10 | 41 |
forebrain | 1.97e-10 | 41 |
anterior neural tube | 1.97e-10 | 41 |
future forebrain | 1.97e-10 | 41 |
ectoderm-derived structure | 2.09e-10 | 171 |
ectoderm | 2.09e-10 | 171 |
presumptive ectoderm | 2.09e-10 | 171 |
neurectoderm | 8.65e-09 | 86 |
neural plate | 4.55e-08 | 82 |
presumptive neural plate | 4.55e-08 | 82 |
brain grey matter | 4.70e-08 | 34 |
gray matter | 4.70e-08 | 34 |
telencephalon | 9.23e-08 | 34 |
regional part of telencephalon | 2.19e-07 | 32 |
cerebral hemisphere | 2.67e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.18e-33 | 235 |
disease of cellular proliferation | 8.89e-32 | 239 |
cell type cancer | 5.22e-20 | 143 |
organ system cancer | 2.17e-15 | 137 |
carcinoma | 1.10e-14 | 106 |
myeloid leukemia | 7.00e-12 | 31 |
leukemia | 3.95e-10 | 39 |
hematologic cancer | 6.25e-10 | 51 |
immune system cancer | 6.25e-10 | 51 |
germ cell and embryonal cancer | 1.74e-07 | 22 |
germ cell cancer | 1.74e-07 | 22 |