FFCP PHASE1:Hg19::chrX:135863084..135863115,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:135863084..135863115,-
|short_description=p2@ARHGEF6
|description=CAGE_peak_2_at_ARHGEF6_5end
|association_with_transcript=387bp_to_ENST00000535736,NM_0048...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9459 | |EntrezGene=9459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=685 | |HGNC=685 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B2,Q15052,Q8N4Q3 | |UniProt=F5H8B2,Q15052,Q8N4Q3 | ||
|association_with_transcript=387bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | |||
|cluster_id=chrX:135863084..135863115,- | |||
|coexpression_cluster_id=C1020 | |||
|description=CAGE_peak_2_at_ARHGEF6_5end | |||
|id=chrX:135863084..135863115,- | |||
|ontology_enrichment_celltype=CL:0000037!6.73e-70!172;CL:0000566!6.73e-70!172;CL:0002032!1.18e-65!165;CL:0000837!1.18e-65!165;CL:0000988!2.16e-62!182;CL:0000738!3.07e-56!140;CL:0002031!8.19e-48!124;CL:0002087!1.68e-45!119;CL:0000763!3.20e-38!112;CL:0000049!3.20e-38!112;CL:0000766!1.70e-26!76;CL:0000542!8.46e-24!53;CL:0000051!8.46e-24!53;CL:0000838!1.84e-23!52;CL:0000557!3.54e-23!71;CL:0000839!8.25e-23!70;CL:0002009!1.01e-19!65;CL:0002194!2.66e-19!63;CL:0000576!2.66e-19!63;CL:0000040!2.66e-19!63;CL:0000559!2.66e-19!63;CL:0002057!2.10e-16!42;CL:0000134!2.15e-15!358;CL:0000084!3.22e-15!25;CL:0000827!3.22e-15!25;CL:0000860!1.94e-14!45;CL:0002320!5.43e-14!365;CL:0000791!4.20e-12!18;CL:0000789!4.20e-12!18;CL:0002420!4.20e-12!18;CL:0002419!4.20e-12!18;CL:0000790!4.20e-12!18;CL:0000048!1.25e-11!430;CL:0000219!7.73e-11!390;CL:0000723!1.64e-10!436;CL:0000034!2.28e-10!444;CL:0000945!1.79e-08!24;CL:0000826!1.79e-08!24;CL:0000236!2.30e-08!14;CL:0000625!3.96e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.35e-17;25!CL:0000542;2.76e-15;53!CL:0002087;4.74e-15;104!CL:0000738;1.85e-14;136!CL:0000576;3.38e-14;48!CL:0000766;5.83e-14;69!CL:0000791;9.67e-14;18!CL:0000789;9.67e-14;18!CL:0002419;9.67e-14;18!CL:0000763;1.18e-13;100!CL:0000988;5.88e-13;177!CL:0000473;1.55e-12;39!CL:0000234;1.55e-12;39!CL:0000860;1.89e-12;33!CL:0002057;1.89e-12;33!CL:0000236;3.45e-09;13!CL:0000625;3.74e-09;11!CL:0000945;1.21e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.04e-82,168;CL:0002032,7.58e-77,161;CL:0000837,7.58e-77,161;CL:0000988,4.41e-74,177;CL:0000738,8.75e-67,136;CL:0002031,5.57e-57,120;CL:0002087,2.69e-54,115;CL:0000763,4.27e-46,108;CL:0000049,4.27e-46,108;CL:0000766,2.67e-33,72;CL:0000557,2.59e-29,67;CL:0000839,6.97e-29,66;CL:0000542,3.83e-26,53;CL:0000051,3.83e-26,53;CL:0000838,9.43e-26,52;CL:0002009,3.69e-25,61;CL:0002194,1.08e-24,59;CL:0000576,1.08e-24,59;CL:0000040,1.08e-24,59;CL:0000559,1.08e-24,59;CL:0000473,5.57e-21,48;CL:0000234,5.57e-21,48;CL:0000860,9.75e-19,42;CL:0002057,9.75e-19,42;CL:0000084,2.30e-17,25;CL:0000827,2.30e-17,25;CL:0000134,3.66e-16,354;CL:0002320,8.23e-15,361;CL:0000791,9.28e-14,18;CL:0000789,9.28e-14,18;CL:0002420,9.28e-14,18;CL:0002419,9.28e-14,18;CL:0000790,9.28e-14,18;CL:0000219,4.65e-11,386;CL:0000236,1.95e-09,14;CL:0000625,3.66e-09,11;CL:0000945,1.26e-08,24;CL:0000826,1.26e-08,24;CL:0000048,1.97e-08,427;CL:0000034,8.97e-08,441;CL:0000723,1.08e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000051;2.76e-15;53!CL:0000790;9.67e-14;18!CL:0002057;1.40e-13;42!CL:0000049;5.59e-13;108 | |||
|ontology_enrichment_disease=DOID:1240!1.11e-15!39;DOID:2531!7.14e-15!51;DOID:0060083!7.14e-15!51;DOID:8692!8.55e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.26e-13;39!DOID:8692;3.47e-12;31!DOID:2531;8.16e-10;51!DOID:0060083;8.16e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.15e-17,39;DOID:2531,9.38e-16,51;DOID:0060083,9.38e-16,51;DOID:8692,9.21e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.67e-27!102;UBERON:0003061!8.67e-27!102;UBERON:0002193!3.11e-25!112;UBERON:0002371!1.27e-19!80;UBERON:0001474!1.78e-17!86;UBERON:0007023!1.50e-15!115;UBERON:0002405!1.96e-14!115;UBERON:0002384!2.02e-14!375;UBERON:0004765!4.37e-12!101;UBERON:0001434!4.37e-12!101;UBERON:0002204!3.05e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.25e-34,98;UBERON:0003061,6.25e-34,98;UBERON:0002193,2.44e-30,108;UBERON:0002371,6.69e-25,76;UBERON:0002405,1.18e-24,93;UBERON:0001474,1.27e-22,82;UBERON:0004765,2.52e-18,90;UBERON:0002384,5.87e-15,371;UBERON:0001434,1.28e-14,100;UBERON:0007023,1.60e-12,114 | |||
|phase1_expression=0.363356758541113,2.14100523890983,2.39622486963151,0,4.02264984984559,0,7.59899634504932,0.631719873426831,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,11.1563572392009,10.0983725023433,10.3898231334057,14.5544782434094,29.5548636534854,19.5068315378256,0,0,0,0.852139206383318,15.0699386436667,21.4328320714438,24.9297933839345,12.0326668482085,11.0675544065084,11.1957737119962,16.8424706329869,14.1666562198803,10.6140714309082,7.17964293008738,8.73302620276138,7.67015821788759,6.16751832032739,5.88442104700697,10.6446185159196,8.70946402198942,9.93225365532058,12.4108445065183,15.4916324060118,6.77132432971709,11.6710250516415,9.5517152520246,7.64059847113288,11.3251040177234,12.1953030288916,9.59005688698562,9.56568770541477,6.98122801675712,10.2293940127847,13.3496249769149,3.40431134814684,4.35975574296902,7.28621129244555,12.5155900420848,12.5969529928968,9.6863920421339,9.20694089968912,11.076183560431,34.2233563825346,38.0561696937428,31.8681141172731,27.6328432620378,32.5883857466069,39.2170431540875,16.8157518807337,26.455918067479,22.46769091305,28.1593991138116,30.0376236194172,35.5803701545422,27.737464466823,26.8265311314128,28.1628695577697,28.4249295297491,23.8513438633841,14.7995371968457,27.6001479004341,19.8782078625119,19.8256992868539,13.4522055115569,16.5931973408299,31.0801436779856,18.4715058492107,18.9153379079548,72.5589389995543,29.6589262636567,35.0351376243703,48.7066821019778,60.1616467179937,40.9502211390024,44.7498467058915,70.9506123064341,44.0634139856323,44.7404155605981,37.3274043450345,40.070752578948,81.1448640058147,45.8205480170767,53.5081656179426,32.4060123795428,58.5809301746417,29.124757513746,34.7063719937456,53.1341353240956,37.5907188902434,28.6476719696824,25.6622052001061,38.8483807220654,45.1792737375097,54.9695196830322,41.436019107703,30.3817358860787,30.0394047404851,20.8603352711136,20.4202409474747,0,0.670700859703636,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,18.499201438317,16.0199358315326,13.4287540124054,13.1169843367938,12.5838880371628,11.5151825412165,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,1.33888245105868,0,0,0,0,0,0.446498641420399,0,0,0,0,0,6.58902087180316,23.2668158488995,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0.352303495931295,0,0.280901613404497,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,1.07633781413317,1.70845911054854,0.635795703478686,1.20036438433761,2.88547081867629,1.03056216018252,0.37223371266318,0,0,0.504867548488229,1.56484827691909,0,0.355009592516614,0,0.508681776931463,0,0,0,0,0,0,0,0,0,0,0,0,6.03678306441573,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,2.36315962672562,13.6853560818542,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0.761016608938393,0,0,23.6368325843901,7.48813648445561,9.06650089961242,0,0,0,0,0,0,105.429932909732,77.3945734976257,30.891889215575,30.4093101709789,31.560608356595,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,1.95441710576241,0,0.791951872933429,0,0,0,4.86495122564762,12.5564272858032,8.43335757932127,0,0,1.42636905040718,0.579125226670317,1.43833425785268,3.04403637507822,48.4207822052038,33.6922599945296,17.0345784139019,15.2728213172901,0.254094624222463,0,0,0.670065061337395,0,33.7053160776232,32.9077605124427,41.8559668570396,0,0,0,0,0.178428988797162,0.315404830067869,0,0,0,0,0,0,2.86715927744673,0.195801157462741,0,41.7671412768233,24.1599904916851,18.6773226156028,0,0,0,0,0,0,0.256278298511402,1.02341449813341,0,0,0.308419387605311,0.177561725313127,0.246381468041427,0,0.232420756919918,0,0,0,0.68888668898764,0.728364672026868,0.917870904715969,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,5.48149691614836,3.39866086332371,0,0,0,4.43076350085206,1.73981983154852,3.21787049690293,0,0,1.6068392984416,3.19013370364003,0,0.307007349452259,0.551346289938122,3.33002759091648,0.870100163485371,0.852266274161009,6.85546674479878,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0,0.744316738719335,0.632758849437452,0,0.255897791311334,0.42793898803392,0.318203247925937,0.78494864019923,7.01502584574927,1.64722217841633,2.00281083987667,0.404364963146632,0,0,0,0.731140468893853,2.11300293513511,0.272999822815972,3.39373036688911,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0,0,1.41904425628239,0.422215270595328,0,0,0,0,0,0,4.89547764039252,0,0,0,0,39.5809135201092,38.2318603571188,23.9251818613148,39.546474725993,40.313502762447,40.2053452939485,45.9026721652398,19.0350042310625,0,0,0,10.7765841572917,9.95457569537469,20.4177090409949,54.0455064550708,18.3613021718191,25.4702142276048,24.3424620132465,21.1004261178461,34.257255729842,24.6493453355848,16.1380292646214,25.0634477090067,14.2205093353347,22.8035066647253,19.5745715975316,36.1969302036777,51.5258017133647,28.8806318449951,31.3146551049382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| ||
|short_description=p2@ARHGEF6 | |||
}} | }} |
Latest revision as of 15:22, 19 September 2015
Short description: | p2@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGEF6_5end |
Coexpression cluster: | C1020_Mast_CD4_acute_chronic_CD8_thymus_Peripheral |
Association with transcript: | 387bp_to_ENST00000535736, NM_004840, uc004fab.2_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | F5H8B2Q15052Q8N4Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.25e-34 | 98 |
blood island | 6.25e-34 | 98 |
hemolymphoid system | 2.44e-30 | 108 |
bone marrow | 6.69e-25 | 76 |
immune system | 1.18e-24 | 93 |
bone element | 1.27e-22 | 82 |
skeletal element | 2.52e-18 | 90 |
connective tissue | 5.87e-15 | 371 |
skeletal system | 1.28e-14 | 100 |
adult organism | 1.60e-12 | 114 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.15e-17 | 39 |
hematologic cancer | 9.38e-16 | 51 |
immune system cancer | 9.38e-16 | 51 |
myeloid leukemia | 9.21e-13 | 31 |