FFCP PHASE1:Hg19::chr12:58148693..58148735,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92979 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25139 | |||
|TSSclassifier=strong | |||
|UniProt=Q86YJ5,Q8N9T1 | |||
|association_with_transcript=-145bp_to_ENST00000266643,NM_138396_5end | |||
|cluster_id=chr12:58148693..58148735,+ | |||
|description=CAGE_peak_2_at_MARCH9_5end | |||
|id=chr12:58148693..58148735,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.29e-20!115;UBERON:0001049!1.02e-14!57;UBERON:0005068!1.02e-14!57;UBERON:0006241!1.02e-14!57;UBERON:0007135!1.02e-14!57;UBERON:0003080!2.15e-14!42;UBERON:0002780!7.41e-14!41;UBERON:0001890!7.41e-14!41;UBERON:0006240!7.41e-14!41;UBERON:0001893!1.14e-13!34;UBERON:0002020!1.18e-13!34;UBERON:0003528!1.18e-13!34;UBERON:0001869!1.28e-13!32;UBERON:0000073!2.65e-13!94;UBERON:0001016!2.65e-13!94;UBERON:0002346!3.52e-13!90;UBERON:0002791!3.59e-13!33;UBERON:0002619!8.36e-13!22;UBERON:0001017!1.18e-12!82;UBERON:0005743!1.50e-12!86;UBERON:0000956!1.58e-12!25;UBERON:0000203!1.58e-12!25;UBERON:0003075!2.46e-12!86;UBERON:0007284!2.46e-12!86;UBERON:0001950!4.45e-12!20;UBERON:0000955!1.27e-11!69;UBERON:0006238!1.27e-11!69;UBERON:0002616!3.16e-11!59;UBERON:0003056!1.75e-10!61;UBERON:0000924!4.33e-08!173;UBERON:0006601!4.33e-08!173;UBERON:0004111!6.79e-08!241;UBERON:0000153!1.02e-07!129;UBERON:0007811!1.02e-07!129;UBERON:0000025!1.41e-07!194;UBERON:0000033!1.73e-07!123;UBERON:0004121!1.82e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.12e-13;22!UBERON:0000956;2.26e-13;25!UBERON:0000203;2.26e-13;25!UBERON:0001950;6.36e-13;20!UBERON:0001869;8.85e-13;32!UBERON:0002791;3.13e-12;32!UBERON:0003528;6.11e-12;34!UBERON:0002020;6.11e-12;34!UBERON:0001893;6.39e-12;34!UBERON:0002780;5.73e-11;41!UBERON:0001890;5.73e-11;41!UBERON:0000073;8.93e-09;53!UBERON:0002616;8.93e-09;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.26e-21,114;UBERON:0000073,1.95e-15,53;UBERON:0002616,1.95e-15,53;UBERON:0001049,2.08e-15,56;UBERON:0005068,2.08e-15,56;UBERON:0006241,2.08e-15,56;UBERON:0007135,2.08e-15,56;UBERON:0002780,2.97e-15,41;UBERON:0001890,2.97e-15,41;UBERON:0003080,2.97e-15,41;UBERON:0006240,2.97e-15,41;UBERON:0001893,9.78e-15,34;UBERON:0003528,1.02e-14,34;UBERON:0002020,1.02e-14,34;UBERON:0001869,1.11e-14,32;UBERON:0001016,2.42e-14,89;UBERON:0002791,3.63e-14,32;UBERON:0002619,8.57e-14,22;UBERON:0000956,1.71e-13,25;UBERON:0000203,1.71e-13,25;UBERON:0001017,1.71e-13,81;UBERON:0001950,5.28e-13,20;UBERON:0000955,1.62e-12,68;UBERON:0006238,1.62e-12,68;UBERON:0002346,2.99e-11,86;UBERON:0003075,2.19e-10,82;UBERON:0007284,2.19e-10,82;UBERON:0003056,5.69e-10,61;UBERON:0011216,2.46e-08,223;UBERON:0000025,4.15e-07,192;UBERON:0004111,4.71e-07,240;UBERON:0004121,7.03e-07,171;UBERON:0000924,7.03e-07,171;UBERON:0006601,7.03e-07,171 | |||
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| |||
|short_description=p2@MARCH9 | |||
}} |
Latest revision as of 16:35, 19 September 2015
Short description: | p2@MARCH9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MARCH9_5end |
Coexpression cluster: | NA |
Association with transcript: | -145bp_to_ENST00000266643, NM_138396_5end |
EntrezGene: | MARCH9 |
HGNC: | 25139 |
UniProt: | Q86YJ5Q8N9T1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.26e-21 | 114 |
regional part of nervous system | 1.95e-15 | 53 |
regional part of brain | 1.95e-15 | 53 |
neural tube | 2.08e-15 | 56 |
neural rod | 2.08e-15 | 56 |
future spinal cord | 2.08e-15 | 56 |
neural keel | 2.08e-15 | 56 |
regional part of forebrain | 2.97e-15 | 41 |
forebrain | 2.97e-15 | 41 |
anterior neural tube | 2.97e-15 | 41 |
future forebrain | 2.97e-15 | 41 |
telencephalon | 9.78e-15 | 34 |
brain grey matter | 1.02e-14 | 34 |
gray matter | 1.02e-14 | 34 |
cerebral hemisphere | 1.11e-14 | 32 |
nervous system | 2.42e-14 | 89 |
regional part of telencephalon | 3.63e-14 | 32 |
regional part of cerebral cortex | 8.57e-14 | 22 |
cerebral cortex | 1.71e-13 | 25 |
pallium | 1.71e-13 | 25 |
central nervous system | 1.71e-13 | 81 |
neocortex | 5.28e-13 | 20 |
brain | 1.62e-12 | 68 |
future brain | 1.62e-12 | 68 |
neurectoderm | 2.99e-11 | 86 |
neural plate | 2.19e-10 | 82 |
presumptive neural plate | 2.19e-10 | 82 |
pre-chordal neural plate | 5.69e-10 | 61 |
organ system subdivision | 2.46e-08 | 223 |
tube | 4.15e-07 | 192 |
anatomical conduit | 4.71e-07 | 240 |
ectoderm-derived structure | 7.03e-07 | 171 |
ectoderm | 7.03e-07 | 171 |
presumptive ectoderm | 7.03e-07 | 171 |