FFCP PHASE1:Hg19::chr17:34431306..34431350,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6351 | |EntrezGene=6351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10630 | |HGNC=10630 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_uc002hkx.1_5end | |association_with_transcript=86bp_to_uc002hkx.1_5end | ||
|cluster_id=chr17:34431306..34431350,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_CCL4_5end | |description=CAGE_peak_2_at_CCL4_5end | ||
|id=chr17:34431306..34431350,+ | |id=chr17:34431306..34431350,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.09e-55!140;CL:0002087!2.52e-54!119;CL:0002031!1.68e-47!124;CL:0000037!6.67e-42!172;CL:0000566!6.67e-42!172;CL:0000988!1.25e-39!182;CL:0002032!9.40e-39!165;CL:0000837!9.40e-39!165;CL:0002057!1.92e-30!42;CL:0000766!2.86e-28!76;CL:0000860!9.33e-28!45;CL:0002194!2.89e-25!63;CL:0000576!2.89e-25!63;CL:0000040!2.89e-25!63;CL:0000559!2.89e-25!63;CL:0000839!1.12e-24!70;CL:0000557!3.59e-24!71;CL:0002009!3.70e-24!65;CL:0000542!8.62e-24!53;CL:0000051!8.62e-24!53;CL:0000838!1.24e-22!52;CL:0000791!5.91e-20!18;CL:0000789!5.91e-20!18;CL:0002420!5.91e-20!18;CL:0002419!5.91e-20!18;CL:0000790!5.91e-20!18;CL:0000625!9.02e-20!11;CL:0000763!3.50e-16!112;CL:0000049!3.50e-16!112;CL:0000084!7.44e-15!25;CL:0000827!7.44e-15!25;CL:0000134!1.02e-09!358;CL:0002320!3.61e-09!365;CL:0000219!2.83e-07!390 | |ontology_enrichment_celltype=CL:0000738!5.09e-55!140;CL:0002087!2.52e-54!119;CL:0002031!1.68e-47!124;CL:0000037!6.67e-42!172;CL:0000566!6.67e-42!172;CL:0000988!1.25e-39!182;CL:0002032!9.40e-39!165;CL:0000837!9.40e-39!165;CL:0002057!1.92e-30!42;CL:0000766!2.86e-28!76;CL:0000860!9.33e-28!45;CL:0002194!2.89e-25!63;CL:0000576!2.89e-25!63;CL:0000040!2.89e-25!63;CL:0000559!2.89e-25!63;CL:0000839!1.12e-24!70;CL:0000557!3.59e-24!71;CL:0002009!3.70e-24!65;CL:0000542!8.62e-24!53;CL:0000051!8.62e-24!53;CL:0000838!1.24e-22!52;CL:0000791!5.91e-20!18;CL:0000789!5.91e-20!18;CL:0002420!5.91e-20!18;CL:0002419!5.91e-20!18;CL:0000790!5.91e-20!18;CL:0000625!9.02e-20!11;CL:0000763!3.50e-16!112;CL:0000049!3.50e-16!112;CL:0000084!7.44e-15!25;CL:0000827!7.44e-15!25;CL:0000134!1.02e-09!358;CL:0002320!3.61e-09!365;CL:0000219!2.83e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.89e-36;33!CL:0002057;4.89e-36;33!CL:0000625;2.95e-33;11!CL:0000473;1.37e-26;39!CL:0000234;1.37e-26;39!CL:0000791;7.49e-23;18!CL:0000789;7.49e-23;18!CL:0002419;7.49e-23;18!CL:0002087;6.52e-22;104!CL:0000576;1.58e-19;48!CL:0000766;1.13e-16;69!CL:0000084;1.16e-15;25!CL:0000542;5.49e-11;53!CL:0000623;3.12e-10;3!CL:0000738;8.16e-10;136!CL:0000767;2.22e-09;3!CL:0000763;6.16e-07;100!CL:0000988;6.67e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.42e-55,136;CL:0002087,1.46e-54,115;CL:0002031,3.13e-47,120;CL:0000037,1.22e-42,168;CL:0002032,3.94e-41,161;CL:0000837,3.94e-41,161;CL:0000988,7.70e-40,177;CL:0000860,8.62e-39,42;CL:0002057,8.62e-39,42;CL:0000473,6.89e-36,48;CL:0000234,6.89e-36,48;CL:0000625,2.91e-33,11;CL:0000766,8.50e-32,72;CL:0002194,2.56e-27,59;CL:0000576,2.56e-27,59;CL:0000040,2.56e-27,59;CL:0000559,2.56e-27,59;CL:0002009,3.26e-26,61;CL:0000839,6.32e-26,66;CL:0000557,1.94e-25,67;CL:0000791,8.06e-23,18;CL:0000789,8.06e-23,18;CL:0002420,8.06e-23,18;CL:0002419,8.06e-23,18;CL:0000790,8.06e-23,18;CL:0000542,1.26e-22,53;CL:0000051,1.26e-22,53;CL:0000838,5.22e-21,52;CL:0000763,1.25e-18,108;CL:0000049,1.25e-18,108;CL:0000084,1.22e-15,25;CL:0000827,1.22e-15,25;CL:0000134,1.21e-13,354;CL:0002320,3.88e-13,361;CL:0000219,2.35e-11,386;CL:0000623,2.89e-10,3;CL:0000825,2.89e-10,3;CL:0000767,1.72e-09,3;CL:0000048,3.46e-09,427;CL:0000034,3.79e-09,441;CL:0000723,6.86e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.38e-29;42!CL:0000790;7.49e-23;18!CL:0000051;5.49e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.38e-37!102;UBERON:0003061!2.38e-37!102;UBERON:0002193!5.89e-34!112;UBERON:0002371!3.41e-20!80;UBERON:0001474!5.11e-18!86;UBERON:0000178!3.26e-17!15;UBERON:0000179!3.26e-17!15;UBERON:0000463!3.26e-17!15;UBERON:0002405!4.38e-16!115;UBERON:0004765!9.31e-14!101;UBERON:0001434!9.31e-14!101;UBERON:0003081!2.13e-12!216;UBERON:0002384!1.99e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!2.38e-37!102;UBERON:0003061!2.38e-37!102;UBERON:0002193!5.89e-34!112;UBERON:0002371!3.41e-20!80;UBERON:0001474!5.11e-18!86;UBERON:0000178!3.26e-17!15;UBERON:0000179!3.26e-17!15;UBERON:0000463!3.26e-17!15;UBERON:0002405!4.38e-16!115;UBERON:0004765!9.31e-14!101;UBERON:0001434!9.31e-14!101;UBERON:0003081!2.13e-12!216;UBERON:0002384!1.99e-08!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.58e-18;15!UBERON:0000179;5.58e-18;15!UBERON:0000463;5.58e-18;15!UBERON:0002390;6.10e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.97e-34,98;UBERON:0003061,2.97e-34,98;UBERON:0002193,3.26e-30,108;UBERON:0002371,1.23e-21,76;UBERON:0001474,1.45e-19,82;UBERON:0000178,6.47e-18,15;UBERON:0000179,6.47e-18,15;UBERON:0000463,6.47e-18,15;UBERON:0002405,6.76e-18,93;UBERON:0004765,3.09e-17,90;UBERON:0001434,7.44e-15,100;UBERON:0002384,1.91e-12,371;UBERON:0003081,9.12e-12,203 | |||
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|short_description=p2@CCL4 | |short_description=p2@CCL4 | ||
}} | }} |
Latest revision as of 16:44, 19 September 2015
Short description: | p2@CCL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CCL4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 86bp_to_uc002hkx.1_5end |
EntrezGene: | CCL4 |
HGNC: | 10630 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.97e-34 | 98 |
blood island | 2.97e-34 | 98 |
hemolymphoid system | 3.26e-30 | 108 |
bone marrow | 1.23e-21 | 76 |
bone element | 1.45e-19 | 82 |
blood | 6.47e-18 | 15 |
haemolymphatic fluid | 6.47e-18 | 15 |
organism substance | 6.47e-18 | 15 |
immune system | 6.76e-18 | 93 |
skeletal element | 3.09e-17 | 90 |
skeletal system | 7.44e-15 | 100 |
connective tissue | 1.91e-12 | 371 |
lateral plate mesoderm | 9.12e-12 | 203 |