FFCP PHASE1:Hg19::chr6:72970389..72970411,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:72970389..72970411,+
|short_description=p6@RIMS1
|description=CAGE_peak_6_at_RIMS1_5end
|association_with_transcript=0bp_to_ENST00000463023,uc011dyf.1_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22999 | |EntrezGene=22999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17282 | |HGNC=17282 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463023,uc011dyf.1_5end | |||
|cluster_id=chr6:72970389..72970411,+ | |||
|coexpression_cluster_id=C1926 | |||
|description=CAGE_peak_6_at_RIMS1_5end | |||
|id=chr6:72970389..72970411,+ | |||
|ontology_enrichment_celltype=CL:0002543!1.14e-10!6;CL:0000055!1.49e-08!180;CL:0002139!1.55e-08!24;CL:0000057!4.59e-08!75;CL:0002590!2.25e-07!3;CL:0000071!8.52e-07!18;CL:0002546!8.52e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002590;4.48e-20;3!CL:0002549;5.33e-14;2!CL:0002556;1.01e-09;6!CL:0000708;4.35e-09;3!CL:0000222;4.88e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,2.77e-20,3;CL:0002549,4.85e-14,2;CL:0002556,1.43e-09,6;CL:0000708,7.72e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0003099;9.74e-08;1!UBERON:0003852;9.74e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;6.58e-08;1!DOID:3112;7.50e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,6.37e-08,1;DOID:3112,7.26e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005284!3.62e-11!5;UBERON:0002049!1.21e-10!79;UBERON:0007798!1.21e-10!79;UBERON:0001638!6.69e-09!9;UBERON:0003920!6.69e-09!9;UBERON:0004582!6.69e-09!9;UBERON:0004535!3.10e-08!110;UBERON:0001009!8.27e-08!113;UBERON:0000055!6.96e-07!69;UBERON:0001986!8.52e-07!18;UBERON:0004638!8.52e-07!18;UBERON:0004852!8.52e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;2.82e-32;5!UBERON:0006876;1.37e-14;11!UBERON:0005629;5.33e-14;2!UBERON:0005358;5.33e-14;2!UBERON:0001886;5.33e-14;2!UBERON:0004086;5.33e-14;2!UBERON:0005282;5.33e-14;2!UBERON:0005281;5.33e-14;2!UBERON:0001758;1.01e-09;6!UBERON:0003672;1.01e-09;6!UBERON:0011137;3.59e-09;11!UBERON:0010323;3.59e-09;11!UBERON:0003210;4.35e-09;3!UBERON:0003104;9.48e-09;7!UBERON:0009142;9.48e-09;7!UBERON:0003129;2.11e-08;7!UBERON:0007195;9.74e-08;1!UBERON:0005705;9.74e-08;1!UBERON:0008193;9.74e-08;1!UBERON:0010912;9.74e-08;1!UBERON:0002514;9.74e-08;1!UBERON:0003457;9.74e-08;1!UBERON:0008907;9.74e-08;1!UBERON:0008001;9.74e-08;1!UBERON:0007213;9.74e-08;1!UBERON:0009891;9.74e-08;1!UBERON:0007914;9.74e-08;1!UBERON:0007375;9.74e-08;1!UBERON:0003323;9.74e-08;1!UBERON:0010258;9.74e-08;1!UBERON:0005253;9.74e-08;1!UBERON:0007842;9.74e-08;1!UBERON:0002397;9.74e-08;1!UBERON:0003113;9.74e-08;1!UBERON:0003277;9.74e-08;1!UBERON:0001709;9.74e-08;1!UBERON:0002244;9.74e-08;1!UBERON:0005620;9.74e-08;1!UBERON:0010364;9.74e-08;1!UBERON:0004288;9.74e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,1.59e-32,5;UBERON:0006876,1.06e-14,11;UBERON:0005629,4.85e-14,2;UBERON:0005358,4.85e-14,2;UBERON:0001886,4.85e-14,2;UBERON:0004086,4.85e-14,2;UBERON:0005282,4.85e-14,2;UBERON:0005281,4.85e-14,2;UBERON:0001758,1.43e-09,6;UBERON:0003672,1.43e-09,6;UBERON:0010323,4.37e-09,11;UBERON:0003210,7.72e-09,3;UBERON:0003129,2.84e-08,7;UBERON:0005705,8.28e-08,1;UBERON:0008193,8.28e-08,1;UBERON:0010912,8.28e-08,1;UBERON:0002514,8.28e-08,1;UBERON:0003457,8.28e-08,1;UBERON:0008907,8.28e-08,1;UBERON:0008001,8.28e-08,1;UBERON:0007213,8.28e-08,1;UBERON:0009891,8.28e-08,1;UBERON:0007914,8.28e-08,1;UBERON:0009292,8.28e-08,1;UBERON:0003099,8.28e-08,1;UBERON:0007375,8.28e-08,1;UBERON:0003323,8.28e-08,1;UBERON:0010258,8.28e-08,1;UBERON:0007842,8.28e-08,1;UBERON:0009494,8.28e-08,1;UBERON:0010042,8.28e-08,1;UBERON:0010045,8.28e-08,1;UBERON:0010259,8.28e-08,1;UBERON:0010359,8.28e-08,1;UBERON:0009526,8.28e-08,1;UBERON:0002397,8.28e-08,1;UBERON:0003113,8.28e-08,1;UBERON:0003277,8.28e-08,1;UBERON:0001709,8.28e-08,1;UBERON:0004066,8.28e-08,1;UBERON:0002244,8.28e-08,1;UBERON:0005620,8.28e-08,1;UBERON:0004362,8.28e-08,1;UBERON:0010364,8.28e-08,1;UBERON:0010046,8.28e-08,1;UBERON:0005868,8.28e-08,1;UBERON:0007238,8.28e-08,1;UBERON:0004288,8.28e-08,1;UBERON:0004068,8.28e-08,1;UBERON:0010334,8.28e-08,1;UBERON:0003852,8.28e-08,1;UBERON:0010253,8.28e-08,1;UBERON:0007195,1.01e-07,1;UBERON:0011137,3.66e-07,14;UBERON:0000165,4.48e-07,29;UBERON:0000930,4.48e-07,29 | |||
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| ||
|short_description=p6@RIMS1 | |||
}} | }} |
Latest revision as of 16:50, 19 September 2015
Short description: | p6@RIMS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RIMS1_5end |
Coexpression cluster: | C1926_myxofibrosarcoma_Smooth_mesodermal_Multipotent_Fibroblast_basal_papillary |
Association with transcript: | 0bp_to_ENST00000463023, uc011dyf.1_5end |
EntrezGene: | RIMS1 |
HGNC: | 17282 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 2.77e-20 | 3 |
fibroblast of choroid plexus | 4.85e-14 | 2 |
fibroblast of periodontium | 1.43e-09 | 6 |
leptomeningeal cell | 7.72e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 6.37e-08 | 1 |
papillary adenocarcinoma | 7.26e-08 | 1 |