FFCP PHASE1:Hg19::chr12:6232421..6232447,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7450 | |EntrezGene=7450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12726 | |HGNC=12726 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_AB385166,GU014837_5end | |association_with_transcript=-59bp_to_AB385166,GU014837_5end | ||
|cluster_id=chr12:6232421..6232447,- | |||
|coexpression_cluster_id=C328 | |coexpression_cluster_id=C328 | ||
|description=CAGE_peak_8_at_VWF_5end | |description=CAGE_peak_8_at_VWF_5end | ||
|id=chr12:6232421..6232447,- | |id=chr12:6232421..6232447,- | ||
|ontology_enrichment_celltype=CL:0002139!4.72e-57!24;CL:0000115!3.54e-52!35;CL:0002078!1.99e-40!44;CL:0000071!1.30e-33!18;CL:0002546!1.30e-33!18;CL:0000213!5.22e-30!57;CL:0000215!5.22e-30!57;CL:0005020!3.47e-27!6;CL:0002138!3.47e-27!6;CL:0005022!3.47e-27!6;CL:0002543!4.41e-19!6;CL:1000413!2.08e-17!9;CL:0002618!2.21e-14!3;CL:0002544!2.23e-12!6;CL:0000222!1.02e-11!119;CL:0002545!4.34e-10!2;CL:0000076!6.37e-08!62 | |ontology_enrichment_celltype=CL:0002139!4.72e-57!24;CL:0000115!3.54e-52!35;CL:0002078!1.99e-40!44;CL:0000071!1.30e-33!18;CL:0002546!1.30e-33!18;CL:0000213!5.22e-30!57;CL:0000215!5.22e-30!57;CL:0005020!3.47e-27!6;CL:0002138!3.47e-27!6;CL:0005022!3.47e-27!6;CL:0002543!4.41e-19!6;CL:1000413!2.08e-17!9;CL:0002618!2.21e-14!3;CL:0002544!2.23e-12!6;CL:0000222!1.02e-11!119;CL:0002545!4.34e-10!2;CL:0000076!6.37e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.48e-62;24!CL:0000115;2.25e-53;36!CL:0000071;8.29e-41;18!CL:0002543;1.09e-40;6!CL:0002078;2.54e-26;45!CL:0000213;2.40e-25;58!CL:0000215;2.40e-25;58!CL:0002138;5.30e-24;6!CL:0002544;1.83e-23;6!CL:0002618;4.02e-21;3!CL:1000413;7.00e-16;9!CL:0002545;4.34e-09;2!CL:0002262;6.67e-09;2!CL:1000398;6.67e-09;2!CL:0000076;1.79e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.11e-62,24;CL:0000115,1.03e-59,36;CL:0002078,1.28e-47,45;CL:0000071,1.09e-40,18;CL:0002546,1.09e-40,18;CL:0002543,1.15e-40,6;CL:0000213,9.20e-37,58;CL:0000215,9.20e-37,58;CL:0005020,5.74e-24,6;CL:0002138,5.74e-24,6;CL:0005022,5.74e-24,6;CL:0002544,2.48e-23,6;CL:0002618,3.63e-21,3;CL:0000222,3.98e-17,121;CL:1000413,8.59e-16,9;CL:0000076,2.25e-11,63;CL:0002545,4.34e-09,2;CL:0002262,6.42e-09,2;CL:1000398,6.42e-09,2;CL:0002321,1.29e-07,250;CL:0000066,1.39e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;8.29e-41;18!CL:0005022;5.30e-24;6!UBERON:0005425;1.78e-16;1!CL:0000222;7.92e-09;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.30e-33!18;UBERON:0004638!1.30e-33!18;UBERON:0004852!1.30e-33!18;UBERON:0000487!5.15e-27!22;UBERON:0000055!3.16e-26!69;UBERON:0006914!1.88e-23!25;UBERON:0002049!3.20e-22!79;UBERON:0007798!3.20e-22!79;UBERON:0001473!3.12e-20!8;UBERON:0004536!3.12e-20!8;UBERON:0006558!3.12e-20!8;UBERON:0003915!2.08e-17!9;UBERON:0004700!2.08e-17!9;UBERON:0001917!2.08e-17!9;UBERON:0002465!4.71e-16!10;UBERON:0001009!1.99e-15!113;UBERON:0001981!2.63e-15!60;UBERON:0007500!2.63e-15!60;UBERON:0004537!2.63e-15!60;UBERON:0006965!2.63e-15!60;UBERON:0007023!3.91e-15!115;UBERON:0004535!1.86e-14!110;UBERON:0004111!2.78e-13!241;UBERON:0001638!1.28e-12!9;UBERON:0003920!1.28e-12!9;UBERON:0004582!1.28e-12!9;UBERON:0000477!9.60e-12!286;UBERON:0003914!2.69e-10!118;UBERON:0005800!4.34e-10!2;UBERON:0001515!4.34e-10!2;UBERON:0000025!6.55e-10!194;UBERON:0004872!6.90e-10!84;UBERON:0005162!1.31e-09!2;UBERON:0000122!1.31e-09!2;UBERON:0002066!8.44e-09!5;UBERON:0000483!4.93e-07!309;UBERON:0000947!5.26e-07!21;UBERON:0010191!5.26e-07!21;UBERON:0000119!6.70e-07!312 | |ontology_enrichment_uberon=UBERON:0001986!1.30e-33!18;UBERON:0004638!1.30e-33!18;UBERON:0004852!1.30e-33!18;UBERON:0000487!5.15e-27!22;UBERON:0000055!3.16e-26!69;UBERON:0006914!1.88e-23!25;UBERON:0002049!3.20e-22!79;UBERON:0007798!3.20e-22!79;UBERON:0001473!3.12e-20!8;UBERON:0004536!3.12e-20!8;UBERON:0006558!3.12e-20!8;UBERON:0003915!2.08e-17!9;UBERON:0004700!2.08e-17!9;UBERON:0001917!2.08e-17!9;UBERON:0002465!4.71e-16!10;UBERON:0001009!1.99e-15!113;UBERON:0001981!2.63e-15!60;UBERON:0007500!2.63e-15!60;UBERON:0004537!2.63e-15!60;UBERON:0006965!2.63e-15!60;UBERON:0007023!3.91e-15!115;UBERON:0004535!1.86e-14!110;UBERON:0004111!2.78e-13!241;UBERON:0001638!1.28e-12!9;UBERON:0003920!1.28e-12!9;UBERON:0004582!1.28e-12!9;UBERON:0000477!9.60e-12!286;UBERON:0003914!2.69e-10!118;UBERON:0005800!4.34e-10!2;UBERON:0001515!4.34e-10!2;UBERON:0000025!6.55e-10!194;UBERON:0004872!6.90e-10!84;UBERON:0005162!1.31e-09!2;UBERON:0000122!1.31e-09!2;UBERON:0002066!8.44e-09!5;UBERON:0000483!4.93e-07!309;UBERON:0000947!5.26e-07!21;UBERON:0010191!5.26e-07!21;UBERON:0000119!6.70e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.29e-41;18!UBERON:0001986;8.29e-41;18!UBERON:0004852;8.29e-41;18!UBERON:0000487;2.39e-33;22!UBERON:0006914;2.57e-29;25!UBERON:0001638;2.68e-27;9!UBERON:0003920;2.68e-27;9!UBERON:0004582;2.68e-27;9!UBERON:0000490;3.18e-21;33!UBERON:0001473;3.51e-18;8!UBERON:0004536;3.51e-18;8!UBERON:0006558;3.51e-18;8!UBERON:0000941;1.78e-16;1!UBERON:0001785;1.78e-16;1!UBERON:0002464;1.78e-16;1!UBERON:0004904;1.78e-16;1!UBERON:0001021;1.78e-16;1!UBERON:0003915;7.00e-16;9!UBERON:0004700;7.00e-16;9!UBERON:0001917;7.00e-16;9!UBERON:0000055;8.00e-15;65!UBERON:0002465;1.12e-14;10!UBERON:0002066;4.38e-13;5!UBERON:0007500;5.68e-13;56!UBERON:0001981;5.68e-13;56!UBERON:0004537;5.68e-13;56!UBERON:0002049;4.46e-12;75!UBERON:0007798;4.46e-12;75!UBERON:0003914;9.70e-11;74!UBERON:0001009;2.84e-09;112!UBERON:0005800;4.34e-09;2!UBERON:0001515;4.34e-09;2!UBERON:0003714;6.67e-09;2!UBERON:0001281;6.67e-09;2!UBERON:0005162;6.67e-09;2!UBERON:0000122;6.67e-09;2!UBERON:0003497;6.67e-09;2!UBERON:0003909;6.67e-09;2!UBERON:0003835;6.67e-09;2!UBERON:0004535;5.88e-08;109!UBERON:0010260;1.13e-07;9!UBERON:0000025;2.35e-07;93!UBERON:0000947;3.89e-07;21!UBERON:0010191;3.89e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.09e-40,18;UBERON:0001986,1.09e-40,18;UBERON:0004852,1.09e-40,18;UBERON:0000487,2.98e-33,22;UBERON:0006914,3.12e-29,25;UBERON:0001638,2.78e-27,9;UBERON:0003920,2.78e-27,9;UBERON:0004582,2.78e-27,9;UBERON:0000055,3.85e-26,68;UBERON:0002049,1.12e-22,78;UBERON:0007798,1.12e-22,78;UBERON:0001473,3.72e-18,8;UBERON:0004536,3.72e-18,8;UBERON:0006558,3.72e-18,8;UBERON:0000941,1.41e-16,1;UBERON:0001785,1.41e-16,1;UBERON:0002464,1.41e-16,1;UBERON:0004904,1.41e-16,1;UBERON:0001021,1.41e-16,1;UBERON:0003902,1.41e-16,1;UBERON:0005425,1.41e-16,1;UBERON:0004535,5.88e-16,109;UBERON:0007500,7.79e-16,59;UBERON:0001981,7.79e-16,59;UBERON:0004537,7.79e-16,59;UBERON:0006965,7.79e-16,59;UBERON:0003915,8.59e-16,9;UBERON:0004700,8.59e-16,9;UBERON:0001917,8.59e-16,9;UBERON:0001009,1.67e-15,112;UBERON:0002465,1.17e-14,10;UBERON:0002066,4.13e-13,5;UBERON:0004872,4.46e-11,83;UBERON:0003914,1.00e-09,117;UBERON:0005800,4.34e-09,2;UBERON:0001515,4.34e-09,2;UBERON:0003714,5.94e-09,2;UBERON:0005162,5.94e-09,2;UBERON:0000122,5.94e-09,2;UBERON:0001281,6.42e-09,2;UBERON:0003497,6.42e-09,2;UBERON:0003909,6.42e-09,2;UBERON:0003835,6.42e-09,2;UBERON:0004111,5.05e-08,240;UBERON:0010260,1.09e-07,9;UBERON:0000947,4.23e-07,21;UBERON:0010191,4.23e-07,21 | |||
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|short_description=p8@VWF | |short_description=p8@VWF | ||
}} | }} |
Latest revision as of 17:52, 19 September 2015
Short description: | p8@VWF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_VWF_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | -59bp_to_AB385166, GU014837_5end |
EntrezGene: | VWF |
HGNC: | 12726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.11e-62 | 24 |
endothelial cell | 1.03e-59 | 36 |
meso-epithelial cell | 1.28e-47 | 45 |
blood vessel endothelial cell | 1.09e-40 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.09e-40 | 18 |
vein endothelial cell | 1.15e-40 | 6 |
lining cell | 9.20e-37 | 58 |
barrier cell | 9.20e-37 | 58 |
lymphangioblast | 5.74e-24 | 6 |
endothelial cell of lymphatic vessel | 5.74e-24 | 6 |
vascular lymphangioblast | 5.74e-24 | 6 |
aortic endothelial cell | 2.48e-23 | 6 |
endothelial cell of umbilical vein | 3.63e-21 | 3 |
mesodermal cell | 3.98e-17 | 121 |
endothelial cell of artery | 8.59e-16 | 9 |
squamous epithelial cell | 2.25e-11 | 63 |
thoracic aorta endothelial cell | 4.34e-09 | 2 |
endothelial cell of sinusoid | 6.42e-09 | 2 |
endothelial cell of hepatic sinusoid | 6.42e-09 | 2 |
embryonic cell | 1.29e-07 | 250 |
epithelial cell | 1.39e-07 | 253 |