FFCP PHASE1:Hg19::chr17:35766967..35767022,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6871 | |EntrezGene=6871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11531 | |HGNC=11531 | ||
|TSSclassifier=strong | |||
|UniProt=B3KU13,O75478 | |UniProt=B3KU13,O75478 | ||
|association_with_transcript=0bp_to_ENST00000428846,NM_001166105,uc002hnt.2_5end | |association_with_transcript=0bp_to_ENST00000428846,NM_001166105,uc002hnt.2_5end | ||
|cluster_id=chr17:35766967..35767022,+ | |||
|description=CAGE_peak_1_at_TADA2A_5end | |description=CAGE_peak_1_at_TADA2A_5end | ||
|id=chr17:35766967..35767022,+ | |id=chr17:35766967..35767022,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!4.41e-10!51;DOID:0060083!4.41e-10!51;DOID:1240!2.03e-08!39 | |ontology_enrichment_disease=DOID:2531!4.41e-10!51;DOID:0060083!4.41e-10!51;DOID:1240!2.03e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:1240;9.44e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.41e-10,51;DOID:0060083,4.41e-10,51;DOID:1240,2.03e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.05e-15!57;UBERON:0005068!2.05e-15!57;UBERON:0006241!2.05e-15!57;UBERON:0007135!2.05e-15!57;UBERON:0000073!3.31e-15!94;UBERON:0001016!3.31e-15!94;UBERON:0002780!4.05e-14!41;UBERON:0001890!4.05e-14!41;UBERON:0006240!4.05e-14!41;UBERON:0001017!7.20e-14!82;UBERON:0002616!1.05e-13!59;UBERON:0007023!1.09e-13!115;UBERON:0003080!1.27e-13!42;UBERON:0000955!1.49e-13!69;UBERON:0006238!1.49e-13!69;UBERON:0005743!2.72e-13!86;UBERON:0001893!1.14e-12!34;UBERON:0001869!1.27e-12!32;UBERON:0002791!4.33e-12!33;UBERON:0002020!3.66e-11!34;UBERON:0003528!3.66e-11!34;UBERON:0002346!8.70e-11!90;UBERON:0001950!5.25e-10!20;UBERON:0000956!5.50e-10!25;UBERON:0000203!5.50e-10!25;UBERON:0002619!7.42e-10!22;UBERON:0003075!9.38e-10!86;UBERON:0007284!9.38e-10!86;UBERON:0003056!1.14e-09!61;UBERON:0000153!3.92e-09!129;UBERON:0007811!3.92e-09!129;UBERON:0000924!4.99e-09!173;UBERON:0006601!4.99e-09!173;UBERON:0004121!3.28e-08!169;UBERON:0000033!5.45e-08!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.10e-11;34!UBERON:0001869;2.35e-11;32!UBERON:0002791;1.27e-10;32!UBERON:0003528;3.50e-10;34!UBERON:0002020;3.50e-10;34!UBERON:0001950;4.94e-10;20!UBERON:0000956;5.41e-10;25!UBERON:0000203;5.41e-10;25!UBERON:0002780;5.86e-10;41!UBERON:0001890;5.86e-10;41!UBERON:0002619;8.08e-10;22!UBERON:0000073;1.22e-09;53!UBERON:0002616;1.22e-09;53!UBERON:0001017;1.28e-07;75!UBERON:0001016;3.61e-07;83!UBERON:0000955;8.65e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.13e-16,89;UBERON:0001049,7.56e-16,56;UBERON:0005068,7.56e-16,56;UBERON:0006241,7.56e-16,56;UBERON:0007135,7.56e-16,56;UBERON:0000073,1.06e-15,53;UBERON:0002616,1.06e-15,53;UBERON:0001017,3.63e-14,81;UBERON:0002780,4.05e-14,41;UBERON:0001890,4.05e-14,41;UBERON:0003080,4.05e-14,41;UBERON:0006240,4.05e-14,41;UBERON:0000955,6.95e-14,68;UBERON:0006238,6.95e-14,68;UBERON:0007023,2.38e-13,114;UBERON:0001893,1.14e-12,34;UBERON:0001869,1.27e-12,32;UBERON:0002346,5.57e-12,86;UBERON:0002791,1.00e-11,32;UBERON:0003528,3.66e-11,34;UBERON:0002020,3.66e-11,34;UBERON:0003075,6.75e-11,82;UBERON:0007284,6.75e-11,82;UBERON:0003056,5.10e-10,61;UBERON:0001950,5.25e-10,20;UBERON:0000956,5.50e-10,25;UBERON:0000203,5.50e-10,25;UBERON:0002619,7.42e-10,22;UBERON:0004121,1.72e-09,171;UBERON:0000924,1.72e-09,171;UBERON:0006601,1.72e-09,171;UBERON:0010371,5.99e-08,104;UBERON:0011216,9.29e-08,223 | |||
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| ||
|short_description=p1@TADA2A | |short_description=p1@TADA2A | ||
}} | }} |
Latest revision as of 17:54, 19 September 2015
Short description: | p1@TADA2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TADA2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000428846, NM_001166105, uc002hnt.2_5end |
EntrezGene: | TADA2A |
HGNC: | 11531 |
UniProt: | B3KU13O75478 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 4.13e-16 | 89 |
neural tube | 7.56e-16 | 56 |
neural rod | 7.56e-16 | 56 |
future spinal cord | 7.56e-16 | 56 |
neural keel | 7.56e-16 | 56 |
regional part of nervous system | 1.06e-15 | 53 |
regional part of brain | 1.06e-15 | 53 |
central nervous system | 3.63e-14 | 81 |
regional part of forebrain | 4.05e-14 | 41 |
forebrain | 4.05e-14 | 41 |
anterior neural tube | 4.05e-14 | 41 |
future forebrain | 4.05e-14 | 41 |
brain | 6.95e-14 | 68 |
future brain | 6.95e-14 | 68 |
adult organism | 2.38e-13 | 114 |
telencephalon | 1.14e-12 | 34 |
cerebral hemisphere | 1.27e-12 | 32 |
neurectoderm | 5.57e-12 | 86 |
regional part of telencephalon | 1.00e-11 | 32 |
brain grey matter | 3.66e-11 | 34 |
gray matter | 3.66e-11 | 34 |
neural plate | 6.75e-11 | 82 |
presumptive neural plate | 6.75e-11 | 82 |
pre-chordal neural plate | 5.10e-10 | 61 |
neocortex | 5.25e-10 | 20 |
cerebral cortex | 5.50e-10 | 25 |
pallium | 5.50e-10 | 25 |
regional part of cerebral cortex | 7.42e-10 | 22 |
ectoderm-derived structure | 1.72e-09 | 171 |
ectoderm | 1.72e-09 | 171 |
presumptive ectoderm | 1.72e-09 | 171 |
ecto-epithelium | 5.99e-08 | 104 |
organ system subdivision | 9.29e-08 | 223 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.41e-10 | 51 |
immune system cancer | 4.41e-10 | 51 |
leukemia | 2.03e-08 | 39 |