FFCP PHASE1:Hg19::chr17:36105074..36105086,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:36105074..36105086,- to FFCP PHASE1:Hg19::chr17:36105074..36105086,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6928 | |EntrezGene=6928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11630 | |HGNC=11630 | ||
|TSSclassifier=strong | |||
|UniProt=P35680,Q6FHW6,E0YMJ6 | |UniProt=P35680,Q6FHW6,E0YMJ6 | ||
|association_with_transcript=9bp_to_NM_000458,NM_001165923,uc002hok.3,uc010wdi.1_5end | |||
|cluster_id=chr17:36105074..36105086,- | |||
|description=CAGE_peak_2_at_HNF1B_5end | |||
|id=chr17:36105074..36105086,- | |||
|ontology_enrichment_celltype=CL:1000497!2.61e-19!18;CL:0002518!2.61e-19!18;CL:1000449!3.93e-16!16;CL:0000066!1.74e-14!254;CL:1000507!1.68e-13!12;CL:1000494!1.68e-13!12;CL:0002681!1.08e-11!13;CL:0002584!1.08e-11!13;CL:0000223!2.71e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.15e-27;17!CL:0002518;1.15e-27;17!CL:1000507;9.88e-25;10!CL:1000494;9.88e-25;10!CL:1000449;8.94e-23;15!CL:0002681;5.67e-16;12!CL:0002584;5.67e-16;12!CL:0000239;9.19e-09;3!CL:1000615;9.19e-09;3!CL:0002306;9.19e-09;3!CL:0002231;1.15e-07;3!CL:0000182;6.23e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,8.46e-28,17;CL:0002518,8.46e-28,17;CL:1000507,7.23e-25,10;CL:1000494,7.23e-25,10;CL:1000449,6.73e-23,15;CL:0000066,1.26e-16,253;CL:0002681,4.56e-16,12;CL:0002584,4.56e-16,12;CL:0000223,2.69e-10,58;CL:0000239,8.63e-09,3;CL:1000615,8.63e-09,3;CL:0002306,8.63e-09,3;CL:0002231,1.58e-07,3;CL:0000182,7.45e-07,12;CL:0002076,7.65e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.50e-14;13!UBERON:0003104;9.79e-11;31!UBERON:0004161;6.06e-10;11!UBERON:0001041;2.55e-09;30!UBERON:0006595;4.38e-07;86 | |||
|ontology_enrichment_disease=DOID:305!7.40e-15!106;DOID:299!1.27e-11!25;DOID:0050687!7.63e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:299;2.85e-12;25!DOID:4468;7.95e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.19e-13,106;DOID:299,2.68e-12,25;DOID:0050687,9.90e-09,143;DOID:4468,9.01e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0006554;3.54e-27;30!UBERON:0001008;3.54e-27;30!UBERON:0004211;9.88e-25;10!UBERON:0009773;9.88e-25;10!UBERON:0001231;9.88e-25;10!UBERON:0004810;9.88e-25;10!UBERON:0002113;1.82e-24;24!UBERON:0011143;1.82e-24;24!UBERON:0006555;8.94e-23;15!UBERON:0004819;8.94e-23;15!UBERON:0001285;8.94e-23;15!UBERON:0007684;8.94e-23;15!UBERON:0000489;1.72e-19;29!UBERON:0005172;3.57e-17;52!UBERON:0005173;3.57e-17;52!UBERON:0001225;5.67e-16;12!UBERON:0008987;5.67e-16;12!UBERON:0002423;3.04e-14;25!UBERON:0005409;1.06e-13;22!UBERON:0001851;2.09e-12;15!UBERON:0000353;2.09e-12;15!UBERON:0000058;2.55e-12;10!UBERON:0002417;5.65e-12;58!UBERON:0000916;5.65e-12;58!UBERON:0000160;4.60e-10;17!UBERON:0002294;2.64e-09;7!UBERON:0001173;2.64e-09;7!UBERON:0006853;9.19e-09;3!UBERON:0007685;9.19e-09;3!UBERON:0004134;9.19e-09;3!UBERON:0006947;9.19e-09;3!UBERON:0004054;9.19e-09;3!UBERON:0002108;1.09e-08;4!UBERON:0004921;8.75e-08;33!UBERON:0005177;1.27e-07;99!UBERON:0002107;3.93e-07;19!UBERON:0006925;3.93e-07;19!UBERON:0002394;6.17e-07;4!UBERON:0003928;6.17e-07;4!UBERON:0003937;9.27e-07;12!UBERON:0005399;9.27e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,2.22e-30,47;UBERON:0005172,7.16e-30,54;UBERON:0005173,7.16e-30,54;UBERON:0001008,1.37e-29,48;UBERON:0002113,1.61e-28,26;UBERON:0003918,1.61e-28,26;UBERON:0011143,1.61e-28,26;UBERON:0005095,1.61e-28,26;UBERON:0007687,1.61e-28,26;UBERON:0002417,4.41e-26,60;UBERON:0000916,4.41e-26,60;UBERON:0006555,4.09e-25,16;UBERON:0004819,4.09e-25,16;UBERON:0004810,7.23e-25,10;UBERON:0000489,4.24e-23,31;UBERON:0004211,6.73e-23,15;UBERON:0009773,6.73e-23,15;UBERON:0001231,6.73e-23,15;UBERON:0001285,6.73e-23,15;UBERON:0007684,6.73e-23,15;UBERON:0004208,6.73e-23,15;UBERON:0005177,5.01e-20,101;UBERON:0004921,9.98e-19,118;UBERON:0004119,2.01e-18,160;UBERON:0000925,2.01e-18,160;UBERON:0006595,2.01e-18,160;UBERON:0005911,2.46e-16,82;UBERON:0001225,4.56e-16,12;UBERON:0008987,4.56e-16,12;UBERON:0009569,7.97e-16,112;UBERON:0001007,1.66e-15,145;UBERON:0001555,1.66e-15,145;UBERON:0007026,1.66e-15,145;UBERON:0000058,2.22e-14,19;UBERON:0009497,3.05e-14,25;UBERON:0000015,3.05e-14,25;UBERON:0002423,3.05e-14,25;UBERON:0006235,3.05e-14,25;UBERON:0004161,3.05e-14,25;UBERON:0007499,3.93e-14,25;UBERON:0009856,1.81e-13,26;UBERON:0003929,2.81e-13,54;UBERON:0001851,1.76e-12,15;UBERON:0000353,1.76e-12,15;UBERON:0003104,5.43e-12,160;UBERON:0009142,5.43e-12,160;UBERON:0008835,7.03e-12,22;UBERON:0003894,7.03e-12,22;UBERON:0005409,7.66e-12,25;UBERON:0002100,1.52e-11,199;UBERON:0009854,2.96e-11,23;UBERON:0001041,3.44e-10,87;UBERON:0000160,4.64e-10,17;UBERON:0003914,1.14e-09,117;UBERON:0000080,1.21e-09,9;UBERON:0002120,1.21e-09,9;UBERON:0004875,1.21e-09,9;UBERON:0005721,1.21e-09,9;UBERON:0005754,1.21e-09,9;UBERON:0007297,1.21e-09,9;UBERON:0006853,8.63e-09,3;UBERON:0007685,8.63e-09,3;UBERON:0004134,8.63e-09,3;UBERON:0006947,9.58e-09,3;UBERON:0004054,9.58e-09,3;UBERON:0002108,1.41e-08,4;UBERON:0003064,2.52e-08,28;UBERON:0003103,5.52e-08,68;UBERON:0005103,9.08e-08,8;UBERON:0000083,9.08e-08,8;UBERON:0009201,9.08e-08,8;UBERON:0006553,9.08e-08,8;UBERON:0003074,9.08e-08,8;UBERON:0003060,9.08e-08,8;UBERON:0004876,9.34e-08,11;UBERON:0002294,3.73e-07,9;UBERON:0001173,3.73e-07,9;UBERON:0004912,3.73e-07,9;UBERON:0002107,4.03e-07,19;UBERON:0006925,4.03e-07,19;UBERON:0008836,4.03e-07,19;UBERON:0003887,4.77e-07,12 | |||
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| ||
|short_description=p2@HNF1B | |||
}} | }} |
Latest revision as of 18:31, 19 September 2015
Short description: | p2@HNF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HNF1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_NM_000458, NM_001165923, uc002hok.3, uc010wdi.1_5end |
EntrezGene: | HNF1B |
HGNC: | 11630 |
UniProt: | P35680Q6FHW6E0YMJ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 8.46e-28 | 17 |
kidney epithelial cell | 8.46e-28 | 17 |
kidney tubule cell | 7.23e-25 | 10 |
nephron tubule epithelial cell | 7.23e-25 | 10 |
epithelial cell of nephron | 6.73e-23 | 15 |
epithelial cell | 1.26e-16 | 253 |
kidney cortical cell | 4.56e-16 | 12 |
renal cortical epithelial cell | 4.56e-16 | 12 |
endodermal cell | 2.69e-10 | 58 |
brush border epithelial cell | 8.63e-09 | 3 |
kidney cortex tubule cell | 8.63e-09 | 3 |
epithelial cell of proximal tubule | 8.63e-09 | 3 |
epithelial cell of prostate | 1.58e-07 | 3 |
hepatocyte | 7.45e-07 | 12 |
endo-epithelial cell | 7.65e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.19e-13 | 106 |
adenocarcinoma | 2.68e-12 | 25 |