FFCP PHASE1:Hg19::chr22:31477296..31477312,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6525 | |EntrezGene=6525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11126 | |HGNC=11126 | ||
|TSSclassifier=strong | |||
|UniProt=C9K039,E7EWD0,C9JV14,C9JYU8,Q59F18,P53814 | |UniProt=C9K039,E7EWD0,C9JV14,C9JYU8,Q59F18,P53814 | ||
|association_with_transcript=0bp_to_ENST00000329852,ENST00000333137,ENST00000347557,ENST00000358743,ENST00000426927,ENST00000440425,ENST00000475548,ENST00000482444,ENST00000489337,ENST00000497697,uc003ajk.1,uc003ajl.1,uc003ajm.1_5end | |association_with_transcript=0bp_to_ENST00000329852,ENST00000333137,ENST00000347557,ENST00000358743,ENST00000426927,ENST00000440425,ENST00000475548,ENST00000482444,ENST00000489337,ENST00000497697,uc003ajk.1,uc003ajl.1,uc003ajm.1_5end | ||
|cluster_id=chr22:31477296..31477312,+ | |||
|description=CAGE_peak_1_at_SMTN_5end | |description=CAGE_peak_1_at_SMTN_5end | ||
|id=chr22:31477296..31477312,+ | |id=chr22:31477296..31477312,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.04e-23!180;CL:0000222!9.57e-18!119;CL:0000183!1.65e-14!59;CL:0000220!5.71e-14!246;CL:0000057!6.80e-14!75;CL:0002321!1.74e-13!248;CL:0000680!2.59e-13!57;CL:0000056!2.59e-13!57;CL:0000355!2.59e-13!57;CL:0000187!7.11e-13!54;CL:0000192!2.26e-12!42;CL:0000514!2.26e-12!42;CL:0000393!2.91e-10!60;CL:0000211!2.91e-10!60;CL:0000359!3.05e-10!32;CL:0000115!9.50e-10!35;CL:0002139!3.05e-09!24;CL:0000071!5.43e-09!18;CL:0002546!5.43e-09!18;CL:0002078!9.12e-09!44;CL:0002620!1.16e-08!23;CL:1000449!4.46e-07!16;CL:1000497!8.88e-07!18;CL:0002518!8.88e-07!18 | |ontology_enrichment_celltype=CL:0000055!4.04e-23!180;CL:0000222!9.57e-18!119;CL:0000183!1.65e-14!59;CL:0000220!5.71e-14!246;CL:0000057!6.80e-14!75;CL:0002321!1.74e-13!248;CL:0000680!2.59e-13!57;CL:0000056!2.59e-13!57;CL:0000355!2.59e-13!57;CL:0000187!7.11e-13!54;CL:0000192!2.26e-12!42;CL:0000514!2.26e-12!42;CL:0000393!2.91e-10!60;CL:0000211!2.91e-10!60;CL:0000359!3.05e-10!32;CL:0000115!9.50e-10!35;CL:0002139!3.05e-09!24;CL:0000071!5.43e-09!18;CL:0002546!5.43e-09!18;CL:0002078!9.12e-09!44;CL:0002620!1.16e-08!23;CL:1000449!4.46e-07!16;CL:1000497!8.88e-07!18;CL:0002518!8.88e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;9.58e-10;32!CL:0002139;2.94e-09;24!CL:0000192;4.00e-09;43!CL:0000071;5.36e-09;18!CL:0002620;1.13e-08;23!CL:0000115;1.18e-08;36!CL:0000187;1.05e-07;55!CL:1000449;2.16e-07;15!CL:1000497;4.84e-07;17!CL:0002518;4.84e-07;17 | |ontology_enrichment_celltype_v019=CL:0000359;9.58e-10;32!CL:0002139;2.94e-09;24!CL:0000192;4.00e-09;43!CL:0000071;5.36e-09;18!CL:0002620;1.13e-08;23!CL:0000115;1.18e-08;36!CL:0000187;1.05e-07;55!CL:1000449;2.16e-07;15!CL:1000497;4.84e-07;17!CL:0002518;4.84e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.79e-18,121;CL:0000057,4.19e-14,76;CL:0002321,7.70e-14,250;CL:0000680,3.68e-13,58;CL:0000056,3.68e-13,58;CL:0000355,3.68e-13,58;CL:0000187,1.02e-12,55;CL:0000192,3.58e-12,43;CL:0000514,3.58e-12,43;CL:0000115,2.77e-10,36;CL:0000359,3.02e-10,32;CL:0000393,3.69e-10,61;CL:0000211,3.69e-10,61;CL:0002078,2.98e-09,45;CL:0002139,3.01e-09,24;CL:0000071,5.37e-09,18;CL:0002546,5.37e-09,18;CL:0002620,1.15e-08,23;CL:1000449,2.11e-07,15;CL:1000497,4.79e-07,17;CL:0002518,4.79e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;4.00e-09;43!CL:0002546;5.36e-09;18!CL:0000355;1.52e-07;58 | |ontology_enrichment_development_v019=CL:0000514;4.00e-09;43!CL:0002546;5.36e-09;18!CL:0000355;1.52e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.19e-26!312;UBERON:0000475!1.36e-25!365;UBERON:0000483!4.26e-25!309;UBERON:0005256!3.78e-23!143;UBERON:0002100!7.18e-23!216;UBERON:0002049!8.23e-23!79;UBERON:0007798!8.23e-23!79;UBERON:0000055!1.11e-22!69;UBERON:0003914!1.12e-22!118;UBERON:0001981!4.10e-22!60;UBERON:0007500!4.10e-22!60;UBERON:0004537!4.10e-22!60;UBERON:0006965!4.10e-22!60;UBERON:0004872!3.67e-21!84;UBERON:0000481!3.63e-19!347;UBERON:0000486!1.32e-18!82;UBERON:0003104!2.25e-18!238;UBERON:0009142!2.25e-18!238;UBERON:0000914!2.61e-18!83;UBERON:0002329!2.61e-18!83;UBERON:0003077!2.61e-18!83;UBERON:0003059!2.61e-18!83;UBERON:0007282!2.61e-18!83;UBERON:0009618!2.61e-18!83;UBERON:0007285!2.61e-18!83;UBERON:0000468!5.14e-18!659;UBERON:0000490!4.03e-17!138;UBERON:0000467!1.06e-16!625;UBERON:0004290!1.68e-16!70;UBERON:0000480!2.14e-16!626;UBERON:0004111!4.94e-16!241;UBERON:0000477!1.36e-15!286;UBERON:0001637!4.80e-15!42;UBERON:0003509!4.80e-15!42;UBERON:0004572!4.80e-15!42;UBERON:0002385!5.21e-14!63;UBERON:0001015!5.21e-14!63;UBERON:0000383!5.21e-14!63;UBERON:0001134!1.71e-13!61;UBERON:0002036!1.71e-13!61;UBERON:0003082!1.71e-13!61;UBERON:0003102!2.71e-13!95;UBERON:0001009!7.56e-13!113;UBERON:0004535!1.11e-12!110;UBERON:0000025!1.25e-12!194;UBERON:0004573!3.81e-12!33;UBERON:0004571!3.81e-12!33;UBERON:0002199!7.36e-10!45;UBERON:0002416!7.36e-10!45;UBERON:0002050!8.10e-10!605;UBERON:0005423!8.10e-10!605;UBERON:0000923!1.62e-09!604;UBERON:0005291!1.62e-09!604;UBERON:0006598!1.62e-09!604;UBERON:0002532!1.62e-09!604;UBERON:0000922!2.01e-09!612;UBERON:0002097!5.16e-09!40;UBERON:0001986!5.43e-09!18;UBERON:0004638!5.43e-09!18;UBERON:0004852!5.43e-09!18;UBERON:0003103!1.51e-08!69;UBERON:0009569!1.90e-08!113;UBERON:0001008!2.18e-08!45;UBERON:0000487!4.58e-08!22;UBERON:0006554!5.06e-08!44;UBERON:0004876!7.43e-08!20;UBERON:0000947!1.91e-07!21;UBERON:0010191!1.91e-07!21;UBERON:0000080!2.39e-07!18;UBERON:0002120!2.39e-07!18;UBERON:0004875!2.39e-07!18;UBERON:0005721!2.39e-07!18;UBERON:0005754!2.39e-07!18;UBERON:0007297!2.39e-07!18;UBERON:0003887!2.44e-07!21;UBERON:0003064!3.00e-07!37;UBERON:0006555!3.14e-07!17;UBERON:0005103!3.14e-07!17;UBERON:0000083!3.14e-07!17;UBERON:0009201!3.14e-07!17;UBERON:0004819!3.14e-07!17;UBERON:0006553!3.14e-07!17;UBERON:0003074!3.14e-07!17;UBERON:0003060!3.14e-07!17;UBERON:0006914!3.66e-07!25;UBERON:0000464!4.07e-07!104;UBERON:0004211!4.46e-07!16;UBERON:0001285!4.46e-07!16;UBERON:0007684!4.46e-07!16;UBERON:0003220!4.46e-07!16;UBERON:0004208!4.46e-07!16;UBERON:0000466!5.06e-07!126;UBERON:0000353!8.14e-07!17;UBERON:0000926!8.36e-07!448;UBERON:0004120!8.36e-07!448;UBERON:0006603!8.36e-07!448 | |ontology_enrichment_uberon=UBERON:0000119!4.19e-26!312;UBERON:0000475!1.36e-25!365;UBERON:0000483!4.26e-25!309;UBERON:0005256!3.78e-23!143;UBERON:0002100!7.18e-23!216;UBERON:0002049!8.23e-23!79;UBERON:0007798!8.23e-23!79;UBERON:0000055!1.11e-22!69;UBERON:0003914!1.12e-22!118;UBERON:0001981!4.10e-22!60;UBERON:0007500!4.10e-22!60;UBERON:0004537!4.10e-22!60;UBERON:0006965!4.10e-22!60;UBERON:0004872!3.67e-21!84;UBERON:0000481!3.63e-19!347;UBERON:0000486!1.32e-18!82;UBERON:0003104!2.25e-18!238;UBERON:0009142!2.25e-18!238;UBERON:0000914!2.61e-18!83;UBERON:0002329!2.61e-18!83;UBERON:0003077!2.61e-18!83;UBERON:0003059!2.61e-18!83;UBERON:0007282!2.61e-18!83;UBERON:0009618!2.61e-18!83;UBERON:0007285!2.61e-18!83;UBERON:0000468!5.14e-18!659;UBERON:0000490!4.03e-17!138;UBERON:0000467!1.06e-16!625;UBERON:0004290!1.68e-16!70;UBERON:0000480!2.14e-16!626;UBERON:0004111!4.94e-16!241;UBERON:0000477!1.36e-15!286;UBERON:0001637!4.80e-15!42;UBERON:0003509!4.80e-15!42;UBERON:0004572!4.80e-15!42;UBERON:0002385!5.21e-14!63;UBERON:0001015!5.21e-14!63;UBERON:0000383!5.21e-14!63;UBERON:0001134!1.71e-13!61;UBERON:0002036!1.71e-13!61;UBERON:0003082!1.71e-13!61;UBERON:0003102!2.71e-13!95;UBERON:0001009!7.56e-13!113;UBERON:0004535!1.11e-12!110;UBERON:0000025!1.25e-12!194;UBERON:0004573!3.81e-12!33;UBERON:0004571!3.81e-12!33;UBERON:0002199!7.36e-10!45;UBERON:0002416!7.36e-10!45;UBERON:0002050!8.10e-10!605;UBERON:0005423!8.10e-10!605;UBERON:0000923!1.62e-09!604;UBERON:0005291!1.62e-09!604;UBERON:0006598!1.62e-09!604;UBERON:0002532!1.62e-09!604;UBERON:0000922!2.01e-09!612;UBERON:0002097!5.16e-09!40;UBERON:0001986!5.43e-09!18;UBERON:0004638!5.43e-09!18;UBERON:0004852!5.43e-09!18;UBERON:0003103!1.51e-08!69;UBERON:0009569!1.90e-08!113;UBERON:0001008!2.18e-08!45;UBERON:0000487!4.58e-08!22;UBERON:0006554!5.06e-08!44;UBERON:0004876!7.43e-08!20;UBERON:0000947!1.91e-07!21;UBERON:0010191!1.91e-07!21;UBERON:0000080!2.39e-07!18;UBERON:0002120!2.39e-07!18;UBERON:0004875!2.39e-07!18;UBERON:0005721!2.39e-07!18;UBERON:0005754!2.39e-07!18;UBERON:0007297!2.39e-07!18;UBERON:0003887!2.44e-07!21;UBERON:0003064!3.00e-07!37;UBERON:0006555!3.14e-07!17;UBERON:0005103!3.14e-07!17;UBERON:0000083!3.14e-07!17;UBERON:0009201!3.14e-07!17;UBERON:0004819!3.14e-07!17;UBERON:0006553!3.14e-07!17;UBERON:0003074!3.14e-07!17;UBERON:0003060!3.14e-07!17;UBERON:0006914!3.66e-07!25;UBERON:0000464!4.07e-07!104;UBERON:0004211!4.46e-07!16;UBERON:0001285!4.46e-07!16;UBERON:0007684!4.46e-07!16;UBERON:0003220!4.46e-07!16;UBERON:0004208!4.46e-07!16;UBERON:0000466!5.06e-07!126;UBERON:0000353!8.14e-07!17;UBERON:0000926!8.36e-07!448;UBERON:0004120!8.36e-07!448;UBERON:0006603!8.36e-07!448 | ||
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| ||
|short_description=p1@SMTN | |short_description=p1@SMTN | ||
}} | }} |
Latest revision as of 19:14, 19 September 2015
Short description: | p1@SMTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMTN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000329852, ENST00000333137, ENST00000347557, ENST00000358743, ENST00000426927, ENST00000440425, ENST00000475548, ENST00000482444, ENST00000489337, ENST00000497697, uc003ajk.1, uc003ajl.1, uc003ajm.1_5end |
EntrezGene: | SMTN |
HGNC: | 11126 |
UniProt: | C9K039E7EWD0C9JV14C9JYU8Q59F18P53814 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.79e-18 | 121 |
fibroblast | 4.19e-14 | 76 |
embryonic cell | 7.70e-14 | 250 |
muscle precursor cell | 3.68e-13 | 58 |
myoblast | 3.68e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.68e-13 | 58 |
muscle cell | 1.02e-12 | 55 |
smooth muscle cell | 3.58e-12 | 43 |
smooth muscle myoblast | 3.58e-12 | 43 |
endothelial cell | 2.77e-10 | 36 |
vascular associated smooth muscle cell | 3.02e-10 | 32 |
electrically responsive cell | 3.69e-10 | 61 |
electrically active cell | 3.69e-10 | 61 |
meso-epithelial cell | 2.98e-09 | 45 |
endothelial cell of vascular tree | 3.01e-09 | 24 |
blood vessel endothelial cell | 5.37e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.37e-09 | 18 |
skin fibroblast | 1.15e-08 | 23 |
epithelial cell of nephron | 2.11e-07 | 15 |
kidney cell | 4.79e-07 | 17 |
kidney epithelial cell | 4.79e-07 | 17 |